Search results for "microbe"

showing 10 items of 114 documents

Characterization of the role of flagellin in the innate immunity triggered by the endophytic pgpr burkholderia phytofirmans in arabidopsis and grapev…

2014

International audience

[SDV] Life Sciences [q-bio][SDE] Environmental Sciencesplant microbe interactionArabidopsis thalianaVitis viniferaPlant Growth Rhizobacteria (PGPR)[SDV]Life Sciences [q-bio][SDE]Environmental Sciences[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyComputingMilieux_MISCELLANEOUS
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Adaptation des communautés microbiennes autotrophes et hétérotrophes aux changements spatio-temporels d'exposition aux pesticides en cours d'eau

2009

National audience

[SDV] Life Sciences [q-bio][SDE] Environmental Sciencessoleau[SDV]Life Sciences [q-bio][SDE]Environmental Sciencesmicrobe autotrophemicrobe hétérotropheComputingMilieux_MISCELLANEOUSpesticide
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Réponses des cellules de Nicotiana tabacum à des molécules microbiennes : évènements de signalisation précoce, influence de la dynamique membranaire …

2018

Responses of Nicotiana tabacum cells to microbial molecule treatments: early signaling events,influence of membrane dynamics, and sugar fluxesIn their natural environment plants are in close interaction with beneficial, neutral, or pathogenicmicrobes, which are highly dependent on carbon resources exuded by plant roots. Sugar transport, which isa key process of plant physiology, is essential to support the fate of plant-microbe interactions. Duringevolution, plants have acquired the ability to perceive microbial molecules, initiating specific signaltransduction cascades and leading to adapted response for microbe lifestyles (avirulent, virulent, or benefic).Plant survival will depend on the…

[SDV] Life Sciences [q-bio]transport de sucresNicotiana tabacummembrane traffickinginteractions plantes-microorganismes[SDV]Life Sciences [q-bio]plant-microbe interactionschitotetrasaccharidesugar transportchitotétrasaccharidetrafic membranairecryptogeincryptogéine
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Recherche de récepteurs de l’immunité des plantes et étude de l’impact de biostimulants sur leur expression et la résistance induite chez des organes…

2021

National audience; La stimulation des défenses immunitaires des plantes représente une stratégie durable deprotection des cultures qui pourrait permettre de réduire l’utilisation de pesticides chimiquesencore trop répandue en viticulture. Son principe réside en l’application, au contact des cellulesvégétales, de molécules élicitrices détectées comme des signaux de danger par la plante. Cessignaux de dangers peuvent être de différente nature et origine comme par exemple la chitine,un chito-oligosaccharide (COS) retrouvé dans les parois fongiques. Leur détection par desrécepteurs de l’immunité entraine une cascade de signalisation complexe, conduisant àl’activation de réactions de défense et …

[SDV] Life Sciences [q-bio]vigne (Vitis vinifera)immunité induiteLysM Receptors Kinases[SDV]Life Sciences [q-bio]Microbe-Associated Molecular PatternsPattern Recognition Receptorschito-oligosaccharides
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CA-SYS: A long term experimental platform on agroecology at various scales

2018

National audience; The French National Institute for Agricultural Research (INRA) has established an ambitious, multiscale, agricultural experimental infrastructure (the CA-SYS platform) as a collaboration between the Research Unit, Agroécologie (Dijon, eastern France), and the Experimental Research Unit, Domaine d’Epoisses (20 km next to Dijon). CA-SYS covers an area of 120 ha, and is divided into 47 fields, each of which has drainage and can be irrigated, and will be initiated in autumn 2018. The aims of CA-SYS are to: i) design and evaluate new agroecological systems; ii) study the transition from current farming systems towards these new agroecological systems, with goals that include a…

agroecology[SDE] Environmental Sciencesno-tillevaluationlegumes[SDV]Life Sciences [q-bio]multicriteriacropping systemslandscapesustainable agriculture[SDV] Life Sciences [q-bio]CA-SYSexperimental platform[SDE]Environmental Sciencestillage[SDV.BV]Life Sciences [q-bio]/Vegetal Biologyplant/microbe interaction[SDV.BV] Life Sciences [q-bio]/Vegetal Biologybiocontrol
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Defining gut mycobiota for wild animals: a need for caution in assigning authentic resident fungal taxa

2021

Animal gut mycobiota, the community of fungi that reside within the gastrointestinal tract, make an important contribution to host health. Accordingly, there is an emerging interest to quantify the gut mycobiota of wild animals. However, many studies of wild animal gut mycobiota do not distinguish between the fungi that likely can reside within animal gastrointestinal tracts from the fungal taxa that are non-residents, such as macrofungi, lichens or plant symbionts/pathogens that can be ingested as part of the host’s diet. Confounding the non-resident and resident gut fungi may obscure attempts to identify processes associated with the authentic, resident gut mycobiota per se. To redress th…

amplicon sequencinghost-microbe interactionsekvensointisuolistomikrobistoMicrobiotaVeterinary medicinedigestive oral and skin physiologyfungiCommunity analysisintestinal fungicommunity analysismicrofungiMicrobiologyQR1-502Intestinal fungimycobiomeHost-microbe interactionvillieläimetSF600-1100CommentarymicrobiotaMicrofungisienetMycobiomeAmplicon sequencingAnimal Microbiome
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Original data for manuscript: Quantity and Quality of Aquaculture Enrichments Influence Disease Epidemics and Provide Ecological Alternatives to Anti…

2021

The data processed and analyzed in this study are given in a single file: Karvonen et al. exposure data.xlsx. For detailed description of the material, methods and results of the study, see the article.

aquaculturedisease epidemiologyenriched rearingloisetSalmo salarSalmo truttamicrobial communityparasitesenvironmental microbesbiofilm
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A review of the importance of mineral nitrogen cycling in the plant-soil-microbe system of permafrost-affected soils : changing the paradigm

2022

The paradigm that permafrost-affected soils show restricted mineral nitrogen (N) cycling in favor of organic N compounds is based on the observation that net N mineralization rates in these cold climates are negligible. However, we find here that this perception is wrong. By synthesizing published data on N cycling in the plant-soil-microbe system of permafrost ecosystems we show that gross ammonification and nitrification rates in active layers were of similar magnitude and showed a similar dependence on soil organic carbon (C) and total N concentrations as observed in temperate and tropical systems. Moreover, high protein depolymerization rates and only marginal effects of C:N stoichiomet…

arktinen aluemaaperämeta-analyysigross N turnoverikiroutakasvillisuusilmastonmuutoksetnitrogenmeta-analysismineralisaatiomikrobistotypensidontaplant-soil-microbe systemkasvitmineralizationtypen kiertoglobal changepermafrost
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Synergistic enhancement via plasmonic nanoplate-bacteria-nanorod supercrystals for highly efficient SERS sensing of food-borne bacteria

2017

Bio-sensing techniques utilizing metallic nanoparticles as a probe have gained more and more attention and play today an important role in the detection of bacteria. To date, although several sensing materials have been tested, there is still a long way to go to achieve a fast, low-cost, ultrasensitive and multifunctional substrate suitable for a universal biosensor for detection of bacterial cells. Here, we report a novel probe design based on anisotropic plasmonic nanoparticles organized to a biocompatible 3D bio-inorganic scaffold, i.e., nanoplate-bacteria-nanorod supercrystals (NBNS) with extremely high surface-enhanced Raman spectroscopic (SERS) activity as a model of synergistic plasm…

assemblyMaterials scienceta221NanoparticleNanotechnology02 engineering and technologyrecognition of microbes010402 general chemistry01 natural sciencesBiokemia solu- ja molekyylibiologia - Biochemistry cell and molecular biologybakteeritsymbols.namesakeNanoteknologia - NanotechnologyMaterials ChemistryKemia - Chemical sciencesElectrical and Electronic EngineeringbacteriaInstrumentationPlasmonPlasmonic nanoparticlesmikrobien tunnistaminenta114SERSMetals and AlloysSubstrate (chemistry)021001 nanoscience & nanotechnologyCondensed Matter Physicschemometrics0104 chemical sciencesSurfaces Coatings and FilmsElectronic Optical and Magnetic Materialsasymmetric nanoparticlessymbolsnanoparticlesNanorodnanopartikkelit0210 nano-technologyRaman spectroscopyBiosensorRaman scattering
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Quantity and Quality of Aquaculture Enrichments Influence Disease Epidemics and Provide Ecological Alternatives to Antibiotics

2021

Environmental heterogeneity is a central component influencing the virulence and epidemiology of infectious diseases. The number and distribution of susceptible hosts determines disease transmission opportunities, shifting the epidemiological threshold between the spread and fadeout of a disease. Similarly, the presence and diversity of other hosts, pathogens and environmental microbes, may inhibit or accelerate an epidemic. This has important applied implications in farming environments, where high numbers of susceptible hosts are maintained in conditions of minimal environmental heterogeneity. We investigated how the quantity and quality of aquaculture enrichments (few vs. many stones

bakteeritauditdisease epidemiologyenriched rearinglcsh:RM1-950Salmo salarlohi<i>Salmo trutta</i>kalatauditenvironmental microbesArticlebiofilmlcsh:Therapeutics. PharmacologytaimenmikrobistoaquaculturebiofilmitSalmo truttamikrobitmicrobial communityepidemiologia<i>Salmo salar</i>vesiviljely (kalatalous)
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