Search results for "microbiome"

showing 10 items of 395 documents

Forensic microbiology applications: A systematic review.

2019

Abstract According to the Human Microbiome Project (HMP), a healthy human body contains ten times more microbes than human cells. Microbial communities colonize different organs of the body, playing fundamental roles both in human health and disease. Despite the vast scientific knowledge of the role of microbial communities in a living body, little is known at present about microbial changes occurring after death, thus leading many authors to investigate the composition of the thanatomicrobiome and its potential applications in the forensic field. The aim of the following review is to provide a general overview of the advances of postmortem microbiology research, mainly focusing on the role…

AdultMaleTime FactorsTime FactorPostmortem bacterial floraBiologyPostmortem microbiologyLiving bodyPathology and Forensic MedicineMicrobiologyHuman healthBody FluidSettore MED/43 - Medicina LegaleCause of DeathHumansForensic microbiologyForensic microbiology; Postmortem bacterial flora; Postmortem microbiology; Thanatomicrobiome; 2734; Issues Ethics and Legal AspectsDead bodyAgedSkinMicrobiotaBrainHeartForensic MedicineMiddle AgedIsolation (microbiology)Databases BibliographicBody FluidsIssues ethics and legal aspectsThanatomicrobiomePostmortem ChangesFemaleDigestive SystemHumanHuman Microbiome ProjectLegal medicine (Tokyo, Japan)
researchProduct

Lack of significant differences between gastrointestinal tract microbial population structure of Helicobacter pylori-infected subjects before and 2 y…

2020

Background According to recent estimates 80% of Latvian population is infected with Helicobacter pylori thus their susceptibility to numerous gastric tract diseases is increased. The 1st line H. pylori eradication therapy includes treatment with clarithromycin in combination with amoxicillin or metronidazole and a proton pump inhibitor. However, potential adverse events caused by such therapies to microbiome are insufficiently studied. Objective This study aimed to evaluate the long-term effect of H. pylori eradication on human gastrointestinal tract (GIT) microbiome. Methods The assessment of H pylori eradication impact on GIT microbiome was done by analyzing 120 samples acquired from 60 s…

AdultMalemedicine.medical_specialtyPopulationGastroenterologyHelicobacter Infections03 medical and health sciences0302 clinical medicineInternal medicineClarithromycinClarithromycinMetronidazolemedicineHumansMicrobiomeeducationeducation.field_of_studybiologybusiness.industryGastroenterologyAmoxicillinProton Pump InhibitorsGeneral MedicineHelicobacter pyloriAmoxicillinMiddle Agedbiology.organism_classificationLatviaAnti-Bacterial AgentsGastrointestinal MicrobiomeMetronidazoleInfectious Diseases030220 oncology & carcinogenesis030211 gastroenterology & hepatologyEnterotypeDrug Therapy CombinationFemaleSample collectionbusinessmedicine.drugHelicobacterREFERENCES
researchProduct

Changes in Gut and Plasma Microbiome following Exercise Challenge in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome (ME/CFS)

2015

Myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) is a disease characterized by intense and debilitating fatigue not due to physical activity that has persisted for at least 6 months, post-exertional malaise, unrefreshing sleep, and accompanied by a number of secondary symptoms, including sore throat, memory and concentration impairment, headache, and muscle/joint pain. In patients with post-exertional malaise, significant worsening of symptoms occurs following physical exertion and exercise challenge serves as a useful method for identifying biomarkers for exertion intolerance. Evidence suggests that intestinal dysbiosis and systemic responses to gut microorganisms may play a rol…

AdultMalemusculoskeletal diseasesPhysical ExertionFirmicuteslcsh:MedicinePhysiologyBacillusBacteremiaDiseaseBiologyMalaiseFecesSore throatmedicineChronic fatigue syndromeHumansMicrobiomeExertionlcsh:ScienceFatigue Syndrome ChronicMultidisciplinarylcsh:RCase-control studyMiddle Agedmedicine.diseaseGastrointestinal MicrobiomeCase-Control StudiesJoint painImmunologyFemalelcsh:Qmedicine.symptomResearch ArticlePLOS ONE
researchProduct

Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis.

2013

Rheumatoid arthritis (RA) is a prevalent systemic autoimmune disease, caused by a combination of genetic and environmental factors. Animal models suggest a role for intestinal bacteria in supporting the systemic immune response required for joint inflammation. Here we performed 16S sequencing on 114 stool samples from rheumatoid arthritis patients and controls, and shotgun sequencing on a subset of 44 such samples. We identified the presence of Prevotella copri as strongly correlated with disease in new-onset untreated rheumatoid arthritis (NORA) patients. Increases in Prevotella abundance correlated with a reduction in Bacteroides and a loss of reportedly beneficial microbes in NORA subjec…

AdultMalerheumatoidQH301-705.5SciencePrevotellaArthritismicrobiomemedicine.disease_causeGeneral Biochemistry Genetics and Molecular BiologyMicrobiologyAutoimmunityPathogenesisArthritis Rheumatoid03 medical and health sciencesMice0302 clinical medicineImmune systemmedicinePrevotellaBacteroidaceae InfectionsAnimalsHumansMicrobiomeBiology (General)030304 developmental biology030203 arthritis & rheumatology0303 health sciencesmetagenomicsGeneral Immunology and MicrobiologybiologyGeneral NeuroscienceautoimmunityQRGeneral Medicinemedicine.diseasebiology.organism_classification3. Good healthMice Inbred C57BLDisease Models AnimalarthritisinflammationRheumatoid arthritisImmunologyMedicineFemaleBacteroidesGenome BacterialeLife
researchProduct

Developments in pediatrics in 2020: choices in allergy, autoinflammatory disorders, critical care, endocrinology, genetics, infectious diseases, micr…

2021

AbstractIn this article, we describe the advances in the field of pediatrics that have been published in the Italian Journal of Pediatrics in 2020. We report progresses in understanding allergy, autoinflammatory disorders, critical care, endocrinology, genetics, infectious diseases, microbiota, neonatology, neurology, nutrition, orthopedics, respiratory tract illnesses, rheumatology in childhood.

Allergyrespiratory tract illnessesRespiratory Tract DiseasesrheumatologyChild Nutrition SciencesReviewinfectious diseasesPediatricsneonatologyRJ1-570endocrinologyRare DiseasesHypersensitivitymicrobiotaortopedicsHumansgeneticsInfectious Disease MedicineAllergy Autoinflammatory disorders Child Nutrition Sciences COVID-19 Critical care Endocrinology Gastrointestinal Microbiome Genetics Hypersensitivity Infectious Disease Medicine Infectious diseases Microbiota Neonatology Neurology Nutrition Orthopedics Rare Diseases Respiratory Tract Diseases RheumatologyneurologyCOVID-19General MedicineGastrointestinal Microbiomecritical careOrthopedicsnutritionautoinflammatory disordersItalian Journal of Pediatrics
researchProduct

The Active Human Gut Microbiota Differs from the Total Microbiota

2011

The human gut microbiota is considered one of the most fascinating reservoirs of microbial diversity hosting between 400 to 1000 bacterial species distributed among nine phyla with Firmicutes, Bacteroidetes and Actinobacteria representing around of the diversity. One of the most intriguing issues relates to understanding which microbial groups are active players in the maintenance of the microbiota homeostasis. Here, we describe the diversity of active microbial fractions compared with the whole community from raw human fecal samples. We studied four healthy volunteers by 16S rDNA gene pyrosequencing. The fractions were obtained by cell sorting based on bacterial RNA concentration. Bacteria…

Anatomy and PhysiologyPolymerase Chain ReactionFecesRNA Ribosomal 16SMolecular Cell BiologyHomeostasisCommunity AssemblyIn Situ Hybridization FluorescenceMultidisciplinaryEcologybiologyQRBiodiversityGenomicsFlow CytometryBacterial Typing TechniquesRNA BacterialCommunity EcologyMedical MicrobiologyMedicineResearch ArticleAdultFirmicutesScienceSensitivity and SpecificityMicrobiologyMicrobial EcologyMicrobiologyActinobacteriaHumansMicrobiomeBiologyCommunity StructureBacteriaClostridialesBacteroidetesBacteriologySequence Analysis DNAComparative Genomicsbiology.organism_classificationGastrointestinal TractSpecies InteractionsMetagenomicsMetagenomePyrosequencingMetagenomicsPhysiological ProcessesCytometryBacteriaPLoS ONE
researchProduct

Brief Report: Intestinal dysbiosis in ankylosing spondylitis

2015

Objective Ankylosing spondylitis (AS) is a common, highly heritable immune-mediated arthropathy that occurs in genetically susceptible individuals exposed to an unknown but likely ubiquitous environmental trigger. There is a close relationship between the gut and spondyloarthritis, as exemplified in patients with reactive arthritis, in whom a typically self-limiting arthropathy follows either a gastrointestinal or urogenital infection. Microbial involvement in AS has been suggested; however, no definitive link has been established. The aim of this study was to determine whether the gut in patients with AS carries a distinct microbial signature compared with that in the gut of healthy contro…

Ankylosing spondylitiAnkylosing spondylitis; Community profiling; Intestinal microbiome; Immunology; Immunology and Allergy; RheumatologyRheumatologyImmunologyCommunity profilingImmunology and AllergyIntestinal microbiome
researchProduct

Role of Food Antioxidants in Modulating Gut Microbial Communities: Novel Understandings in Intestinal Oxidative Stress Damage and Their Impact on Hos…

2021

Dietary components have an important role on the structure and function of host gut microbial communities. Even though, various dietary components, such as carbohydrates, fats, proteins, fibers, and vitamins, have been studied in depth for their effect on gut microbiomes, little attention has been paid regarding the impact of several food antioxidants on the gut microbiome. The long-term exposure to reactive oxygen species (ROS) can cause microbial dysbiosis which leads to numerous intestinal diseases such as microbiota dysbiosis, intestinal injury, colorectal cancers, enteric infections, and inflammatory bowel diseases. Recently, it has been shown that the food derived antioxidant compound…

Antioxidantfood.ingredientPhysiologymedicine.medical_treatmentClinical BiochemistryRM1-950ReviewGut floramedicine.disease_causeBiochemistryMicrobiologyImmune systemfoodmedicineMicrobiomeMolecular BiologyCarotenoidchemistry.chemical_classificationfood additivebiologygut microbiotaFood additivedigestive oral and skin physiologyCell Biologybiology.organism_classificationmedicine.diseasevitaminspolyphenolantioxidantschemistryTherapeutics. PharmacologyDysbiosisbioactive peptidesOxidative stressAntioxidants (Basel, Switzerland)
researchProduct

The Effects of Probiotics and Prebiotics on Gastrointestinal and Behavioural Symptoms in Autism Spectrum Disorder

2021

Background: Autism Spectrum Disorders (ASDs) are a group of prevalent neuropsychiatric disorders. They present a complex and unknown etiology, which in most cases includes significant peripheral alterations outside the brain such as in the composition of gut microbiota. Because the gut microbiota is involved in modulating the gut-brain axis, several studies have suggested that the microbiome in the gut can modify metabolites which are able to cross the blood-brain barrier and modulate brain function. Methods: We reviewed the current evidence regarding microbiota alterations in patients with ASD and the effects of the administration of probiotics and prebiotics in these patients, both in te…

Autism Spectrum DisorderSynbioticsmedicine.medical_treatmentGut–brain axisBehavioral SymptomsGut floraBioinformaticslaw.inventionProbioticlawmedicineHumansPharmacology (medical)MicrobiomeGeneral Pharmacology Toxicology and Pharmaceuticsbiologybusiness.industryProbioticsPrebioticbiology.organism_classificationmedicine.diseaseGastrointestinal MicrobiomePrebioticsAutism spectrum disorderAutismbusinessCurrent Reviews in Clinical and Experimental Pharmacology
researchProduct

Stimulated and unstimulated saliva samples have significantly different bacterial profiles

2018

Epidemiological studies use saliva on a regular basis as a non-invasive and easy-to-take sample, which is assumed to be a microbial representative of the oral cavity ecosystem. However, comparative studies between different kinds of saliva samples normally used in microbial studies are scarce. The aim of the current study was to compare oral microbiota composition between two different saliva samples collected simultaneously: non-stimulated saliva with paper points and stimulated saliva collected after chewing paraffin gum. DNA was extracted from saliva samples of ten individuals, then analyzed by 16S rRNA pyrosequencing to describe bacterial diversity. The results demonstrate significant d…

Bacterial DiseasesMale0301 basic medicineSalivaPhysiologylcsh:MedicineMicrobiologiaPathology and Laboratory MedicineOral cavityDatabase and Informatics Methodsfluids and secretions0302 clinical medicineOral DiseasesCariesMedicine and Health SciencesFood sciencelcsh:ScienceChildMultidisciplinaryGenomicsBody FluidsBacterial PathogensInfectious Diseasesmedicine.anatomical_structureMedical MicrobiologyParaffinFemaleAnatomyPathogensSequence AnalysisResearch ArticleAdolescentBioinformaticsOral MedicineSequence DatabasesMicrobial GenomicsBiologyResearch and Analysis MethodsDental plaqueMicrobiologyBuccal mucosa03 medical and health sciencesOral Microbiotastomatognathic systemTongueGeneticsmedicineHumansEpidemiologiaSalivaMicrobial PathogensBacteriaBocalcsh:ROrganismsBiology and Life SciencesStreptococcus030206 dentistrymedicine.disease16S ribosomal RNAstomatognathic diseasesBiological Databases030104 developmental biologyEstomatologiaPyrosequencinglcsh:QMicrobiomePLOS ONE
researchProduct