Search results for "model."

showing 10 items of 23664 documents

A multidisciplinary analytical framework to delineate spawning areas and quantify larval dispersal in coastal fish

2019

International audience; Assessing larval dispersal is essential to understand the structure and dynamics of marine populations. However, knowledge about early-life dispersal is sparse, and so is our understanding of the spawning process, perhaps the most obscure component of biphasic life cycles. Indeed, the poorly known species-specific spawning modality and early-life traits, along with the high spatio-temporal variability of the oceanic circulation experienced during larval drift, hamper our ability to properly appraise the realized connectivity of coastal fishes. Here, we propose an analytical framework which combines Lagrangian modeling, network theory, otolith analyses and biogeograph…

0106 biological sciencesConservation of Natural ResourcesOceans and SeasPopulation DynamicsCoastal fishEcosystem ManagementConservationAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesFish natal originsmedicineMediterranean SeaAnimalsDiplodus vulgarisMarine ecosystem14. Life underwaterEcosystemOtolithMarine Protected AreaLagrangian Flow Network[SDU.OCEAN]Sciences of the Universe [physics]/Ocean Atmosphere[SDV.EE]Life Sciences [q-bio]/Ecology environmentFish natal originbiologyEcology010604 marine biology & hydrobiologyFishesMarine connectivityPelagic zoneGeneral MedicineDiplodusbiology.organism_classificationPollutionCoastal fishesCoastal fishemedicine.anatomical_structureLarvaBiological dispersalMarine protected areaModels-hydrodynamicsModels-hydrodynamic
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Biotrickling filter modeling for styrene abatement. Part 1: Model development, calibration and validation on an industrial scale

2017

Abstract A three-phase dynamic mathematical model based on mass balances describing the main processes in biotrickling filtration: convection, mass transfer, diffusion, and biodegradation was calibrated and validated for the simulation of an industrial styrene-degrading biotrickling filter. The model considered the key features of the industrial operation of biotrickling filters: variable conditions of loading and intermittent irrigation. These features were included in the model switching from the mathematical description of periods with and without irrigation. Model equations were based on the mass balances describing the main processes in biotrickling filtration: convection, mass transfe…

0106 biological sciencesConvectionEngineeringEnvironmental EngineeringHealth Toxicology and MutagenesiseducationBiotrickling filter010501 environmental sciencesResidence time (fluid dynamics)01 natural scienceslaw.invention:Enginyeria química::Química del medi ambient::Química atmosfèrica [Àrees temàtiques de la UPC]Filter (large eddy simulation)Bioreactorslaw010608 biotechnologyMass transferEnvironmental ChemistryGases - PurificationVolatile organic compoundDiffusion (business)FiltrationStyrene0105 earth and related environmental scienceschemistry.chemical_classificationgeographyAir PollutantsVolatile Organic Compoundsgeography.geographical_feature_categorybusiness.industryPublic Health Environmental and Occupational HealthEnvironmental engineeringGeneral MedicineGeneral ChemistryPilot unitModels TheoreticalVolatile organic compoundInletPollutionGasos - DepuracióBiodegradation EnvironmentalchemistryCalibrationMathematical modelingBiological air treatmentbusinessFiltration
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AtCCS is a functional homolog of the yeast copper chaperone Ccs1/Lys7

2005

AbstractIn plant chloroplasts two superoxide dismutase (SOD) activities occur, FeSOD and Cu/ZnSOD, with reciprocal regulation in response to copper availability. This system presents a unique model to study the regulation of metal-cofactor delivery to an organelle. The Arabidopsis thaliana gene AtCCS encodes a functional homolog to yeast Ccs1p/Lys7p, a copper chaperone for SOD. The AtCCS protein was localized to chloroplasts where it may supply copper to the stromal Cu/ZnSOD. AtCCS mRNA expression levels are upregulated in response to Cu-feeding and senescence. We propose that AtCCS expression is regulated to allow the most optimal use of Cu for photosynthesis.

0106 biological sciencesCu/Zn superoxide dismutaseChloroplastsSaccharomyces cerevisiae ProteinsMolecular Sequence DataArabidopsisBiophysicsSaccharomyces cerevisiaeMetallo chaperoneChloroplastModels Biological01 natural sciencesBiochemistryGreen fluorescent proteinSuperoxide dismutase03 medical and health sciencesDownregulation and upregulationGene Expression Regulation PlantStructural BiologyOrganelleGeneticsAmino Acid SequenceRNA MessengerMolecular BiologyGene030304 developmental biology0303 health sciencesbiologyArabidopsis ProteinsGene Expression ProfilingGenetic Complementation TestCell BiologyYeastChloroplastProtein TransportBiochemistryChaperone (protein)Mutationbiology.proteinSequence AlignmentCopperMolecular Chaperones010606 plant biology & botanyFEBS Letters
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Quorum Sensing and Density-Dependent Dispersal in an Aquatic Model System

2012

International audience; Many organisms use cues to decide whether to disperse or not, especially those related to the composition of their environment. Dispersal hence sometimes depends on population density, which can be important for the dynamics and evolution of subdivided populations. But very little is known about the factors that organisms use to inform their dispersal decision. We investigated the cues underlying density-dependent dispersal in interconnected microcosms of the freshwater protozoan Paramecium caudatum. In two experiments, we manipulated (i) the number of cells per microcosm and (ii) the origin of their culture medium (supernatant from high-or low-density populations). …

0106 biological sciencesDYNAMICSAquatic OrganismsParameciumPopulation DynamicsEMIGRATIONlcsh:MedicineMarine and Aquatic Sciences01 natural sciencesPopulation densityBehavioral EcologySpatial and Landscape Ecologylcsh:ScienceOrganismFreshwater Ecology0303 health sciencesMultidisciplinarybiologyEcologyAnimal BehaviorEcologySwarm behaviourQuorum Sensing[SDE]Environmental SciencesMicrocosmResearch ArticleFreshwater EnvironmentsSignal TransductionMetapopulation DynamicsSTRATEGIESMovementMarine Biology010603 evolutionary biologyModels Biological03 medical and health sciencesRATESBiologySOCIAL INFORMATION;EVOLUTION;EMIGRATION;STRATEGIES;DYNAMICS;LIZARD;RATES030304 developmental biologyPopulation Biologylcsh:RSOCIAL INFORMATIONLIZARDbiology.organism_classificationEVOLUTIONQuorum sensingEarth SciencesBiological dispersallcsh:QParamecium caudatumAdaptation[SDE.BE]Environmental Sciences/Biodiversity and EcologyZoologyEcological Environments
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Protist predation can select for bacteria with lowered susceptibility to infection by lytic phages

2015

Background: Consumer-resource interactions constitute one of the most common types of interspecific antagonistic interaction. In natural communities, complex species interactions are likely to affect the outcomes of reciprocal co-evolution between consumers and their resource species. Individuals face multiple enemies simultaneously, and consequently they need to adapt to several different types of enemy pressures. In this study, we assessed how protist predation affects the susceptibility of bacterial populations to infection by viral parasites, and whether there is an associated cost of defence on the competitive ability of the bacteria. As a study system we used Serratia marcescens and i…

0106 biological sciencesDYNAMICSMultiple species interactionalkueliötPhage resistancePREYTrade-offmedicine.disease_cause01 natural sciencesBacteriophageDECREASED VIRULENCEBacteriophagesHETEROGENEITYPhage-host interactionSerratia marcescens2. Zero hungerGenetics0303 health scienceseducation.field_of_studybiologyTetrahymenaProtistProtistsBiological Evolution010601 ecologyLytic cycle1181 Ecology evolutionary biologyResearch ArticleAntagonistic co-evolutionVIRUSESPopulationRESISTANT MUTANTSPseudomonas fluorescensSerratiabakteriofagitMicrobiologyTetrahymena thermophilaMECHANISMS03 medical and health sciencesmedicineHost-parasite interactioneducationEcosystemEcology Evolution Behavior and Systematics030304 developmental biologyCOEVOLUTION15. Life on landbiology.organism_classificationEVOLUTIONMODELPseudomonas fluorescens SBW25Serratia marcescensBacteria
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Decision support systems (DSS) for wastewater treatment plants - A review of the state of the art.

2019

The use of decision support systems (DSS) allows integrating all the issues related with sustainable development in view of providing a useful support to solve multi-scenario problems. In this work an extensive review on the DSSs applied to wastewater treatment plants (WWTPs) is presented. The main aim of the work is to provide an updated compendium on DSSs in view of supporting researchers and engineers on the selection of the most suitable method to address their management/operation/design problems. Results showed that DSSs were mostly used as a comprehensive tool that is capable of integrating several data and a multi-criteria perspective in order to provide more reliable results. Only …

0106 biological sciencesDecision support systemWastewater treatment plant (WWTP)Environmental EngineeringComputer sciencemedia_common.quotation_subjectAigües residuals -- Depuració:Desenvolupament humà i sostenible::Enginyeria ambiental::Tractament de l'aigua [Àrees temàtiques de la UPC]Bioengineering010501 environmental sciencesDecision support systemsWastewater01 natural sciencesSoftwareSistemes d'ajuda a la decisióDecision support system (DSS)010608 biotechnologySustainable developmentDesenvolupament sostenibleQuality (business)Waste WaterDecision-makingSewage disposal plantsWaste Management and Disposal0105 earth and related environmental sciencesmedia_commonDSSSustainable developmentSettore ICAR/03 - Ingegneria Sanitaria-AmbientaleMathematical modellingRenewable Energy Sustainability and the Environmentbusiness.industryDecision – making processDecision–making processUsabilityGeneral MedicineCompendiumWork (electrical)Risk analysis (engineering)Decision – making proce:Informàtica::Intel·ligència artificial [Àrees temàtiques de la UPC]businessSoftwareProcess optimizationBioresource technology
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Modeling dense inflorescences

2016

Showy inflorescences - clusters of flowers - are a common feature of many plants, greatly contributing to their beauty. The large numbers of individual flowers (florets), arranged in space in a systematic manner, make inflorescences a natural target for procedural modeling. We present a suite of biologically motivated algorithms for modeling and animating the development of inflorescences with closely packed florets. These inflorescences share the following characteristics: (i) in their ensemble, the florets form a relatively smooth, often approximately planar surface; (ii) there are numerous collisions between petals of the same or adjacent florets; and (iii) the developmental stage and ty…

0106 biological sciencesDevelopmental stageUmbel020207 software engineering02 engineering and technologyPhyllotaxis01 natural sciencesComputer Graphics and Computer-Aided DesignPosition based dynamicsInflorescence0202 electrical engineering electronic engineering information engineeringCorymbPetalBiological systemProcedural modeling010606 plant biology & botanyACM Transactions on Graphics
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Disturbance-grazer-vegetation interactions maintain habitat diversity in mountain pasture-woodlands

2017

Low-intensity livestock grazing is a widespread management tool in order to maintain habitat diversity in mountain pasture-woodlands for nature conservation purposes. Historical photographs indicate that forest disturbance significantly contributed to forest-grassland mosaic pattern formation. Disturbance grazer interactions are however poorly understood and the effects of logging or windthrow are rarely considered in management plans. Moreover, disturbance-grazer interactions are crucial for the maintenance of open habitats in the upcoming "rewilding" approach of nature conservation. We aimed to understand the effects of forest gap creation by the breakdown of senile trees or by single-tre…

0106 biological sciencesDisturbance (geology)010504 meteorology & atmospheric sciencesWoodlandWindthrowUngulates010603 evolutionary biology01 natural sciencesGrasslandForest-grassland mosaicGrazing0105 earth and related environmental sciences2. Zero hunger[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologygeographygeography.geographical_feature_categoryAgroforestryEcologyEcological ModelingSegregationLoggingSemi-open landscape15. Life on landManagementHabitatSecondary forest[SDE.BE]Environmental Sciences/Biodiversity and EcologyTree lineEcological Modelling
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Interactions between environmental variability and immigration rate control patterns of species diversity

2006

Abstract Theories focussing on local competition processes predict that species diversity is maximised with high-frequency environmental variability or alternatively with intermediate frequencies. The models coupling regional processes to local explanations of diversity patterns predict that the immigration rate from a regional species pool can strongly increase diversity. However, the interaction between local and regional processes in temporally fluctuating environment has received little attention. We explored in a simulation study how the patterns of species diversity are affected by the frequency spectrum of stochastic environmental variations and density independent immigration rate i…

0106 biological sciencesEcological nicheEcologyEcological Modelingmedia_common.quotation_subjectBiodiversitySpecies diversity15. Life on landBiology010603 evolutionary biology01 natural sciencesCompetition (biology)010601 ecologyIntermediate Disturbance HypothesisBiological dispersalGrowth ratehuman activitiesDiversity (business)media_commonEcological Modelling
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Corrigendum to “Soil fungal community composition does not alter along a latitudinal gradient through the maritime and sub-Antarctic” Fungal Ecology …

2012

0106 biological sciencesEcologyFungal ecologyEcologyEcological ModelingEnvironmental ethicsPlant ScienceBiologySub antarctic010603 evolutionary biology01 natural sciencesCommunity compositionEcology Evolution Behavior and Systematics010606 plant biology & botanyFungal Ecology
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