Search results for "model."

showing 10 items of 23664 documents

Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions

2009

46 pages, 4 tables, 6 figures, 3 additinoal files.

0106 biological sciencesMESH: Genome PlantArabidopsis thalianaGene regulatory networkArabidopsis01 natural sciencesTranscriptomeGene Expression Regulation PlantArabidopsisMESH: Gene Expression Regulation DevelopmentalCluster AnalysisGene Regulatory NetworksMESH: ArabidopsisMESH: EcosystemMESH: Models GeneticOligonucleotide Array Sequence AnalysisMESH: Gene Regulatory NetworksGenetics0303 health sciencesMESH: Stress MechanicalbiologyMESH: Genomicsfood and beveragesGene Expression Regulation DevelopmentalGenomicsPhenotypeAlgorithmsGenome PlantMESH: MutationSystems biologyGenomicsMESH: AlgorithmsComputational biologyMESH: Arabidopsis ProteinsMESH: Phenotype03 medical and health sciencesMESH: Gene Expression Profiling[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMESH: Gene Expression Regulation PlantEcosystem030304 developmental biologyModels GeneticMicroarray analysis techniquesArabidopsis ProteinsGene Expression ProfilingResearchfungiRobustness (evolution)biology.organism_classificationMESH: Cluster AnalysisGene expression profilingMutationMESH: Oligonucleotide Array Sequence AnalysisStress Mechanical010606 plant biology & botany
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Community size can affect the signals of ecological drift and niche selection on biodiversity

2020

Made available in DSpace on 2020-12-12T01:24:05Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-06-01 Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) Academy of Finland Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) Ecological drift can override the effects of deterministic niche selection on small populations and drive the assembly of some ecological communities. We tested this hypothesis with a unique data set sampled identically in 200 streams in two regions (tropical Brazil and boreal Finland) that differ in macroinvertebrate community size by fivefold. Null models allowed us t…

0106 biological sciencesMETACOMMUNITIESNichenull modelsBeta diversityBiodiversitydispersal metacommunities010603 evolutionary biology01 natural sciencesCOLONIZATIONDISPERSALCONNECTIVITYAbundance (ecology)TROPICAL STREAMbeta-diversity deviation14. Life underwaterdispersalDISTURBANCEBETA-DIVERSITYRelative species abundanceEcosystemFinlandEcology Evolution Behavior and SystematicsRESTORATIONdemographic stochasticityβ-diversity deviationvesieläimistöEcology010604 marine biology & hydrobiologySmall population sizeBiodiversitybeta diversity deviation15. Life on landBiotaluonnon monimuotoisuusbiodiversiteettiGeographyHabitat destruction13. Climate action1181 Ecology evolutionary biologySIMILARITYPATTERNShyönteisetcommunity assemblySpecies richnessaquatic insectsmetacommunitiesBrazil
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Within-season movements of Alpine songbird distributions are driven by fine-scale environmental characteristics

2020

AbstractInformation about distribution and habitat use of organisms is crucial for conservation. Bird distribution within the breeding season has been usually considered static, but this assumption has been questioned. Within-season movements may allow birds to track changes in habitat quality or to adjust site choice between subsequent breeding attempts. Such movements are especially likely in temperate mountains, given the substantial environmental heterogeneity and changes occurring during bird breeding season. We investigated the within-season movements of breeding songbirds in the European Alps in spring-summer 2018, using repeated point counts and dynamic occupancy models. For all the…

0106 biological sciencesMaleConservation of Natural ResourcesOccupancyBehavioural ecologyPopulationMicroclimatelcsh:Medicine010603 evolutionary biology01 natural sciencesArticle010605 ornithologySongbirdsSeasonal breederTemperate climateAnimalslcsh:ScienceeducationEcosystemEcological modellingeducation.field_of_studyMultidisciplinarybiologyEcologyReproductionlcsh:RVegetationMicroclimateAnimal behaviourbiology.organism_classificationSongbirdGeographyHabitatlcsh:QAnimal MigrationFemaleSeasonsAnimal DistributionScientific Reports
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Variation in predation risk and vole feeding behaviour: a field test of the risk allocation hypothesis.

2003

Many prey animals experience temporal variation in the risk of predation and therefore face the problem of allocating their time between antipredator efforts and other activities like feeding and breeding. We investigated time allocation of prey animals that balanced predation risk and feeding opportunities. The predation risk allocation hypothesis predicts that animals should forage more in low- than in high-risk situations and that this difference should increase with an increasing attack ratio (i.e. difference between low- and high-risk situations) and proportion of time spent at high risk. To test these predictions we conducted a field test using bank voles ( Clethrionomys glareolus) as…

0106 biological sciencesMaleForage (honey bee)Food ChainForagingTime allocationCarnivoraTrade-off010603 evolutionary biology01 natural sciencesPredationRisk Factorsbiology.animalAnimals0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyPredatorEcology Evolution Behavior and SystematicsPopulation DensitybiologyEcologyArvicolinae05 social sciencesFeeding BehaviorModels Theoreticalbiology.organism_classificationWeaselPredatory BehaviorVoleFemaleOecologia
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Negative frequency-dependent selection of sexually antagonistic alleles in Myodes glareolus.

2011

Sexually antagonistic genetic variation, where optimal values of traits are sex-dependent, is known to slow the loss of genetic variance associated with directional selection on fitness-related traits. However, sexual antagonism alone is not sufficient to maintain variation indefinitely. Selection of rare forms within the sexes can help to conserve genotypic diversity. We combined theoretical models and a field experiment with Myodes glareolus to show that negative frequency-dependent selection on male dominance maintains variation in sexually antagonistic alleles. In our experiment, high-dominance male bank voles were found to have low-fecundity sisters, and vice versa. These results show …

0106 biological sciencesMaleLitter SizeFrequency-dependent selectionZoologyBiologySocial Environment010603 evolutionary biology01 natural sciencesLife history theory03 medical and health sciencesSexual Behavior AnimalGenetic variationAnimalsGenetic variabilityAlleleSelection GeneticAllelesEcosystem030304 developmental biology0303 health sciencesSex CharacteristicsMultidisciplinaryNatural selectionModels GeneticDirectional selectionArvicolinaeGenetic VariationFertilitySocial DominanceEvolutionary ecologyFemaleGenetic FitnessScience (New York, N.Y.)
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Why ruminating ungulates chew sloppily: Biomechanics discern a phylogenetic pattern.

2019

Altres ajuts: "Beatriu de Pinos" 2014 - BP-A 00048 There is considerable debate regarding whether mandibular morphology in ungulates primarily reflects phylogenetic affinities or adaptation to specific diet. In an effort to help resolve this debate, we use three-dimensional finite element analysis (FEA) to assess the biomechanical performance of mandibles in eleven ungulate taxa with well-established but distinct dietary preferences. We found notable differences in the magnitude and the distribution of von Mises stress between Artiodactyla and Perissodactyla, with the latter displaying lower overall stress values. Additionally, within the order Artiodactyla the suborders Ruminantia and Tylo…

0106 biological sciencesMaleModels AnatomicUngulateScienceFinite Element AnalysisZoologyRhinocerosMandible010603 evolutionary biology01 natural sciencesbiomechanicsRuminantiaBite ForceEvolution Molecular03 medical and health sciencesImaging Three-DimensionalSpecies SpecificityAnimalsCluster AnalysisRuminatingFEAPerissodactylaPhylogeny030304 developmental biologyArtiodactylafunctional morphology0303 health sciencesMultidisciplinarybiologyQRReproducibility of ResultsRuminantsbiology.organism_classificationTylopodaBiomechanical PhenomenaDietBite force quotientPhylogenetic PatternMedicineMasticationFemaleAdaptationPloS one
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Advantage of rare infanticide strategies in an invasion experiment of behavioural polymorphism

2012

Killing conspecific infants (infanticide) is among the most puzzling phenomena in nature. Stable polymorphism in such behaviour could be maintained by negative frequency-dependent selection (benefit of rare types). However, it is currently unknown whether there is genetic polymorphism in infanticidal behaviour or whether infanticide may have any fitness advantages when rare. Here we show genetic polymorphism in non-parental infanticide. Our novel invasion experiment confirms negative frequency-dependent selection in wild bank vole populations, where resource benefits allow an infanticidal strategy to invade a population of non-infanticidal individuals. The results show that infanticidal beh…

0106 biological sciencesMalePopulationGeneral Physics and AstronomyBiology010603 evolutionary biology01 natural sciencesGenetic correlationGeneral Biochemistry Genetics and Molecular BiologyArticleSex FactorsPolymorphism (computer science)AnimalseducationMaternal BehaviorSelection (genetic algorithm)Paternal BehaviorComputingMilieux_MISCELLANEOUSGeneticseducation.field_of_studyMultidisciplinaryModels StatisticalPolymorphism GeneticBehavior AnimalArvicolinaeGeneral Chemistrybiology.organism_classification010601 ecologyBank voleAggressionAnimals NewbornEvolutionary biologyMutationLinear ModelsFemale[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Does evolution of iteroparous and semelparous reproduction call for spatially structured systems?

2000

A persistent question in the evolution of life histories is the fitness trade-off between reproducing only once (semelparity) in a lifetime or reproducing repeated times in different seasons (iteroparity). The problem can be formulated into a research agenda by assuming that one reproductive strategy is resident (has already evolved) and by asking whether invasion (evolution) of an alternative reproductive strategy is possible. For a spatially nonstructured system, Bulmer (1994) derived the relationship v + PA1 (PA is adult survival; vbS and bS are offspring numbers for iteroparous and semelparous breeding strategies, respectively) at which semelparous population cannot be invaded by an ite…

0106 biological sciencesMaleReproduction (economics)PopulationPopulation DynamicsReproductive strategyBiology010603 evolutionary biology01 natural sciencesModels BiologicalEvolutionarily stable strategyGeneticsAnimalseducationSemelparity and iteroparityEcology Evolution Behavior and SystematicsEcosystemeducation.field_of_studyEcologyReproductionBiological Evolution010601 ecologyEvolutionary biologyMutationBiological dispersalFemaleStructured systemsGeneral Agricultural and Biological SciencesEvolution; international journal of organic evolution
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Phenotypic Divergence among West European Populations of Reed Bunting Emberiza schoeniclus: The Effects of Migratory and Foraging Behaviours

2013

[EN] Divergent selection and local adaptation are responsible for many phenotypic differences between populations, potentially leading to speciation through the evolution of reproductive barriers. Here we evaluated the morphometric divergence among west European populations of Reed Bunting in order to determine the extent of local adaptation relative to two important selection pressures often associated with speciation in birds: migration and diet. We show that, as expected by theory, migratory E. s. schoeniclus had longer and more pointed wings and a slightly smaller body mass than the resident subspecies, with the exception of E. s. lusitanica, which despite having rounder wings was the s…

0106 biological sciencesMaleZOOLOGIASexual-dimorphismAnimal EvolutionSpeciationBuntinglcsh:MedicineWing-lengthSubspecies01 natural sciencesDivergent Evolution010605 ornithologyBehavioral EcologyOrnithologyNatural SelectionWings AnimalPasseriformeslcsh:Science10. No inequalityeducation.field_of_studyMultidisciplinaryNatural selectionEcologyEcologyBill sizeReproductive isolationBiodiversityAdaptation PhysiologicalEuropePhenotypeDarwins finchesFemaleResearch ArticleMorphologyEvolutionary ProcessesEvolutionForagingPopulationBOTANICAZoologyEmberiza schoeniclusBiologyForms of Evolution010603 evolutionary biologyMarsh sparrowsBody-sizeMicroevolutionAnimalsAdaptationeducationBiologySelectionLocal adaptationEvolutionary Biologylcsh:RFeeding Behaviorbiology.organism_classificationOrganismal EvolutionEvolutionary EcologyLinear Modelslcsh:QAnimal MigrationZoology
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Testosterone-Mediated Effects on Fitness-Related Phenotypic Traits and Fitness

2009

International audience; The physiological and behavioral mechanisms underlying life-history trade-offs are a continued source of debate. Testosterone (T) is one physiological factor proposed to mediate the trade-off between reproduction and survival. We use phenotypic engineering and multiple laboratory and field fitness-related phenotypic traits to test the effects of elevated T between two bank vole Myodes glareolus groups: dominant and subordinate males. Males with naturally high T levels showed higher social status (laboratory dominance) and mobility (distance between capture sites) than low-T males, and the effect of T on immune response was also T group specific, suggesting that behav…

0106 biological sciencesMalemedicine.medical_specialtymedicine.drug_class[SDE.MCG]Environmental Sciences/Global ChangesRadioimmunoassayZoologySpatial BehaviorHierarchy SocialTrade-off010603 evolutionary biology01 natural sciencesAntibodies03 medical and health sciencesImmune systemSpecies SpecificityInternal medicinemedicineAgonistic behaviourAnimalsTestosteroneEcology Evolution Behavior and SystematicsFinland030304 developmental biology0303 health sciencesbiologyReproductive successAggressionArvicolinaePhenotypic traitbiology.organism_classificationAndrogenSurvival AnalysisBank voleEndocrinologyPhenotypeImmunoglobulin GLinear Modelsmedicine.symptom
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