Search results for "model."
showing 10 items of 23664 documents
Is it advantageous for Atlantic salmon to be triploid at lower temperatures?
2020
Marine organisms living at low temperatures tend to have larger genomes and larger cells which suggest that these traits can be beneficial in colder environments. In fish, triploidy (three complete sets of chromosomes) can be induced experimentally following fertilization, which provides a model system to investigate the hypothesis that larger cells and genomes offers a physiological advantage at low temperatures. We tested this hypothesis by measuring metabolic rates and swimming performance of diploid and triploid Atlantic salmon (Salmo salar) post smolts acclimated to 3 or 10.5 °C. At 10.5 °C, triploids had significantly lower maximum metabolic rates which resulted in a lower aerobic sco…
Low fitness at low latitudes: Wintering in the tropics increases migratory delays and mortality rates in an Arctic breeding shorebird
2020
Publisher's version (útgefin grein)
Reconstruction and analysis of genome-scale metabolic model of a photosynthetic bacterium
2010
Abstract Background Synechocystis sp. PCC6803 is a cyanobacterium considered as a candidate photo-biological production platform - an attractive cell factory capable of using CO2 and light as carbon and energy source, respectively. In order to enable efficient use of metabolic potential of Synechocystis sp. PCC6803, it is of importance to develop tools for uncovering stoichiometric and regulatory principles in the Synechocystis metabolic network. Results We report the most comprehensive metabolic model of Synechocystis sp. PCC6803 available, iSyn669, which includes 882 reactions, associated with 669 genes, and 790 metabolites. The model includes a detailed biomass equation which encompasses…
Effects of a mobile disturbance pattern on dynamic patch networks and metapopulation persistence
2021
Abstract Motivation Certain early-succession habitats may emerge only at restricted locations following disturbance. Therefore, whether disturbances tend to occur at certain sites or not can significantly affect habitat availability and metapopulation persistence of early-successional habitat specialists. Available models that combine metapopulation and landscape processes do not address how to model mobile, spatially shifting disturbance intensities independent of factors of site suitability. We present a model that allows the study on how a mobile disturbance pattern, of either natural or anthropogenic origin, affects patch network and metapopulation dynamics in realistic, heterogeneous l…
Null models for animal social network analysis and data collected via focal sampling: Pre‐network or node network permutation?
2020
In social networks analysis, two different approaches have predominated in creating null models for hypothesis testing, namely pre‐network and node network permutation approaches. Although the pre‐network permutation approach appears more advantageous, its use has mainly been restricted to data on associations and sampling methods such as ‘group follows’. The pre‐network permutation approach has recently been adapted to data on interactions and the focal sampling method, but its performance in different scenarios has not been thoroughly explored. Here, we assessed the performance of the pre‐network and node network permutation approach in several simulated scenarios based on proneness to fa…
Low temperature trumps high food availability to determine the distribution of intertidal mussels Perna perna in South Africa
2016
Explanations of species distributions often assume that the absence of a species is due to its inability to tolerate an environmental variable. Recent modelling techniques based on the dynamic energy budget (DEB) theory offer an effective way of identifying how interacting environmental parameters influence distributions through non-lethal effects on growth and development. The mussel Perna perna is an abundant ecosystem engineer around the coasts of Africa, South America and the Arabian peninsula, with an unexplained 1500 km lacuna in its distribution on the west coast of South Africa. We used a DEB approach to explain its distribution in southern Africa and test the hypothesis that this l…
High-resolution numerical modelling of the barotropic tides in the Gulf of Gabes, eastern Mediterranean Sea (Tunisia)
2017
International audience; A high-resolution 2D barotropic tidal model was developed for the Gulf of Gabes and used to characterise hydrodynamic processes and tidal dynamics. The model is based on the Regional Ocean Modelling System. It is forced at the open boundaries by the semidiurnal M2 and S2 astronomical components while meteorological forcing has been neglected. The model results show good agreement with observations confirming that it reproduces the gulf's main tidal characteristics reasonably well. In fact, the simulated semidiurnal tidal components M2 and S2 generate important sea level variations and coastal currents. Tidal propagation is directed to the gulf's western sector while …
Shift in Tuna Catches due to Ocean Warming.
2017
Ocean warming is already affecting global fisheries with an increasing dominance of catches of warmer water species at higher latitudes and lower catches of tropical and subtropical species in the tropics. Tuna distributions are highly conditioned by sea temperature, for this reason and their worldwide distribution, their populations may be a good indicator of the effect of climate change on global fisheries. This study shows the shift of tuna catches in subtropical latitudes on a global scale. From 1965 to 2011, the percentage of tropical tuna in longliner catches exhibited a significantly increasing trend in a study area that included subtropical regions of the Atlantic and western Pacifi…
Self-organized dynamics in spatially structured populations
2001
Self-organization and pattern formation represent the emergence of order in temporal and spatial processes. Self-organization in population ecology is gaining attention due to the recent advances concerning temporal fluctuations in the population size of dispersal-linked subunits. We shall report that spatially structured models of population renewal promote the emergence of a complex power law order in spatial population dynamics. We analyse a variety of population models showing that self-organization can be identified as a temporal match in population dynamics among local units, and how the synchrony changes in time. Our theoretical results are concordant with analyses of population data…
The irreducible uncertainty of the demography–environment interaction in ecology
2002
The interpretation of ecological data has been greatly improved by bridging the gap between ecological and statistical models. The major challenge is to separate competing hypotheses concerning demography, or other ecological relationships, and environmental variability (noise). In this paper we demonstrate that this may be an arduous, if not impossible, task. It is the lack of adequate ecological theory, rather than statistical sophistication, which leads to this problem. A reconstruction of underlying ecological processes can only be done if we are certain of either the demographic or the noise model, which is something that can only be achieved by an improved theory of stochastic ecologi…