Search results for "mutation."

showing 10 items of 2808 documents

A new Euler–Mahonian constructive bijection

2011

AbstractUsing generating functions, MacMahon proved in 1916 the remarkable fact that the major index has the same distribution as the inversion number for multiset permutations, and in 1968 Foata gave a constructive bijection proving MacMahon’s result. Since then, many refinements have been derived, consisting of adding new constraints or new statistics.Here we give a new simple constructive bijection between the set of permutations with a given number of inversions and those with a given major index. We introduce a new statistic, mix, related to the Lehmer code, and using our new bijection we show that the bistatistic (mix,INV) is Euler–Mahonian. Finally, we introduce the McMahon code for …

Discrete mathematicsMultisetMathematics::CombinatoricsApplied MathematicsMajor indexMajor indexConstructiveCombinatoricssymbols.namesakeConstructive bijectionLehmer codeBijectionEuler's formulasymbolsInversion numberDiscrete Mathematics and CombinatoricsPermutation (bi)statisticStatisticMathematicsDiscrete Applied Mathematics
researchProduct

A loopless algorithm for generating the permutations of a multiset

2003

AbstractMany combinatorial structures can be constructed from simpler components. For example, a permutation can be constructed from cycles, or a Motzkin word from a Dyck word and a combination. In this paper we present a constructor for combinatorial structures, called shuffle on trajectories (defined previously in a non-combinatorial context), and we show how this constructor enables us to obtain a new loopless generating algorithm for multiset permutations from similar results for simpler objects.

Discrete mathematicsMultisetMathematics::CombinatoricsGeneral Computer ScienceMultiset permutationsLoopless algorithmStructure (category theory)Context (language use)Gray codesTheoretical Computer ScienceCombinatoricsGray codePermutationLoopless generating algorithmsShuffle combinatorial objectsBinomial coefficientWord (computer architecture)Computer Science::Formal Languages and Automata TheoryMathematicsMathematicsofComputing_DISCRETEMATHEMATICSComputer Science(all)Theoretical Computer Science
researchProduct

A fractal set from the binary reflected Gray code

2005

The permutation associated with the decimal expression of the binary reflected Gray code with $N$ bits is considered. Its cycle structure is studied. Considered as a set of points, its self-similarity is pointed out. As a fractal, it is shown to be the attractor of a IFS. For large values of $N$ the set is examined from the point of view of time series analysis

Discrete mathematicsPermutation (music)FísicaGeneral Physics and AstronomyBinary numberFOS: Physical sciencesStatistical and Nonlinear PhysicsNonlinear Sciences - Chaotic DynamicsDecimalGray codeSet (abstract data type)FractalAttractorPoint (geometry)Chaotic Dynamics (nlin.CD)Mathematical PhysicsMathematics
researchProduct

A note on the packing of two copies of some trees into their third power

2003

Abstract It is proved in [1] that if a tree T of order n is not a star, then there exists an edge-disjoint placement of two copies of this tree into its fourth power. In this paper, we prove the packing of some trees into their third power.

Discrete mathematicsPermutationFourth powerApplied MathematicsA* search algorithmlaw.inventionPackingCombinatoricslawOrder (group theory)Tree (set theory)Power treeEmbeddingPlacementMathematicsApplied Mathematics Letters
researchProduct

Analysis of properties of recombination operators proposed for the node-depth encoding

2011

The node-depth encoding is a representation for evolutionary algorithms applied to tree problems. Its represents trees by storing the nodes and their depth in a proper ordered list. The original formulation of the node-depth encoding has only mutation operators as the search mechanism. Although it is computationally efficient, the exclusive use of mutation restricts the exploration of the search space and the algorithm convergence. Then, this work proposes two specific recombination operators to improve the convergence of the algorithm using the node-depth encoding representation. These operators are based on recombination operators for permutation representations. Analysis of the proposed …

Discrete mathematicsPermutationTree (data structure)Encoding (memory)Mutation (genetic algorithm)Convergence (routing)Evolutionary algorithmQuantitative Biology::Populations and EvolutionNode (circuits)Representation (mathematics)AlgorithmMathematicsProceedings of the 13th annual conference companion on Genetic and evolutionary computation
researchProduct

Improved constructions of mixed state quantum automata

2009

Quantum finite automata with mixed states are proved to be super-exponentially more concise rather than quantum finite automata with pure states. It was proved earlier by A. Ambainis and R. Freivalds that quantum finite automata with pure states can have an exponentially smaller number of states than deterministic finite automata recognizing the same language. There was an unpublished ''folk theorem'' proving that quantum finite automata with mixed states are no more super-exponentially more concise than deterministic finite automata. It was not known whether the super-exponential advantage of quantum automata is really achievable. We prove that there is an infinite sequence of distinct int…

Discrete mathematicsQuantum algorithmsNested wordPermutation groupsGeneral Computer Scienceω-automatonTheoretical Computer ScienceCombinatoricsDeterministic finite automatonDFA minimizationDeterministic automatonQuantum finite automataAutomata theoryNondeterministic finite automatonFinite automataComputer Science::Formal Languages and Automata TheoryMathematicsComputer Science(all)Theoretical Computer Science
researchProduct

Efficient algorithm for learning simple regular expressions from noisy examples

1994

We present an efficient algorithm for finding approximate repetitions in a given sequence of characters. First, we define a class of simple regular expressions which are of star-height one and do not contain union operations, and a stochastic mutation process of a given length over a string of characters. Then, assuming that a given string of characters is obtained corrupted by the defined mutation process from some long enough word generated by a simple regular expression, we try to restore the expression. We prove that to within some reasonable accuracy it is always possible if the length of the mutation process is bounded comparing to the length of the example. We provide an algorithm by…

Discrete mathematicsRegular languageComputer scienceBounded functionString (computer science)Mutation (genetic algorithm)Edit distanceRegular expressionExpression (computer science)Time complexity
researchProduct

Finitary Representations and Images of Transitive Finitary Permutation Groups

1999

Abstract We characterize the point stabilizers and kernels of finitary permutation representations of infinite transitive groups of finitary permutations. Moreover, the number of such representations is determined.

Discrete mathematicshomomorphic imagesMathematics::CombinatoricsAlgebra and Number Theorypermutation groupsfinitary groupsBit-reversal permutationGeneralized permutation matrixPermutation groupCyclic permutationCombinatoricsMathematics::LogicPermutationwreath productsWreath productMathematics::Category TheoryComputer Science::Logic in Computer ScienceFinitaryPermutation graphMathematicsJournal of Algebra
researchProduct

Large-scale network functional interactions during distraction and reappraisal in remitted bipolar and unipolar patients.

2017

Objectives The human brain is organized into large-scale networks that dynamically interact with each other. Extensive evidence has shown characteristic changes in certain large-scale networks during transitions from internally directed to externally directed attention. The aim of the present study was to compare these context-dependent network interactions during emotion regulation and to examine potential alterations in remitted unipolar and bipolar disorder patients. Methods We employed a multi-region generalized psychophysiological interactions analysis to quantify connectivity changes during distraction vs reappraisal pair-wise across 90 regions placed throughout the four networks of i…

DorsumAdultMaleBipolar DisorderEmotions050105 experimental psychologyDevelopmental psychology03 medical and health sciences0302 clinical medicineCognitionSalience (neuroscience)DistractionmedicinePermutation testingConnectomeHumans0501 psychology and cognitive sciencesAttentionBipolar disorderBiological PsychiatryNeuronal PlasticityLarge scale network05 social sciencesHealthy subjectsBrainCognitionmedicine.diseasePsychiatry and Mental healthFemaleNerve NetPsychologyNeuroscience030217 neurology & neurosurgeryBipolar disorders
researchProduct

The broad-spectrum antiinfective drug artesunate interferes with the canonical nuclear factor kappa B (NF-κB) pathway by targeting RelA/p65.

2015

Infection with human cytomegalovirus (HCMV) is a serious medical problem, particularly in immunocompromised individuals and neonates. The success of standard antiviral therapy is hampered by low drug compatibility and induction of viral resistance. A novel strategy is based on the exploitation of cell-directed signaling inhibitors. The broad antiinfective drug artesunate (ART) offers additional therapeutic options such as oral bioavailability and low levels of toxic side-effects. Here, novel ART-derived compounds including dimers and trimers were synthesized showing further improvements over the parental drug. Antiviral activity and mechanistic aspects were determined leading to the followi…

DrugHuman cytomegalovirusTranscriptional Activationmedia_common.quotation_subjectTranscription Factor RelAArtesunateCytomegalovirusPharmacologyCREBAntiviral Agentschemistry.chemical_compoundVirologyDrug Resistance ViralmedicineHumansCyclic AMP Response Element-Binding ProteinHerpesviridaemedia_commonPharmacologybiologyHEK 293 cellsNF-kappa BTranscription Factor RelANF-κBmedicine.diseaseIn vitroArtemisininsUp-RegulationHEK293 CellschemistryMutationbiology.proteinSignal transductionSignal TransductionAntiviral research
researchProduct