Search results for "nomic"

Fish Health and Fisheries, Implications for Stock Assessment and Management: The Mediterranean Example

2012

Although fish health may influence key population-level processes, particularly those dealing with natural mortality, reproduction and growth, which in turn affect stock productivity, there has been little emphasis on the links between fish health and management of marine fisheries. This paper addresses this gap and illustrates how knowledge of fish health provides insight to marine fisheries biologists, stock assessment modellers and managers. The study demonstrates ways in which the consideration of condition (energy reserves) indicators and parasitism adds to improved stock assessment and fisheries management, also in situations of data shortage when standard methods cannot be applied, a…

Distribution, ecological role and symbioses of selected shrubby species in the Mediterranean Basin: a review

2020

Among the Mediterranean ecosystems, shrublands are a characteristic type of vegetation, widespread in different habitats. Owing to different factors such as the physiological, morphological, reproductive, phenological and regenerative properties, as well as the inter-intraspecific interactions, each shrubby species represents an important element within the plant community and plays a specific ecological role. In this review, attention was focused on the ecological functions and type of plant-microsymbiont interactions in respect of selected shrubby species within the Mediterranean Basin: Amelanchier ovalis, Astragalus nebrodensis, Crataegus laciniata, Lycium intricatum, Prunus spinosa and …

Environmental filtering and spatial effects on metacommunity organisation differ among littoral macroinvertebrate groups deconstructed by biological …

2018

We examined spatial and environmental effects on the deconstructed assemblages of littoral macroinvertebrates within a large lake. We deconstructed assemblages by three biological trait groups: body size, dispersal mode and oviposition behaviour. We expected that spatial effects on assemblage structuring decrease and environmental effects increase with increasing body size. We also expected stronger environmental filtering and weaker spatial effect on the assemblages of flying species compared with assemblages of non-flying species. Stronger effect of environmental filtering was expected on the assemblages with species attaching eggs compared with assemblages of species with free eggs. We u…

Transcriptome and proteome analysis of Pinctada margaritifera calcifying mantle and shell: focus on biomineralization

2010

Abstract Background The shell of the pearl-producing bivalve Pinctada margaritifera is composed of an organic cell-free matrix that plays a key role in the dynamic process of biologically-controlled biomineralization. In order to increase genomic resources and identify shell matrix proteins implicated in biomineralization in P. margaritifera, high-throughput Expressed Sequence Tag (EST) pyrosequencing was undertaken on the calcifying mantle, combined with a proteomic analysis of the shell. Results We report the functional analysis of 276 738 sequences, leading to the constitution of an unprecedented catalog of 82 P. margaritifera biomineralization-related mantle protein sequences. Component…

Evolutionary relationships, biogeography and morphological characters of Glinus (Molluginaceae), with special emphasis on the genus composition in Su…

2021

Glinus is a small genus of Molluginaceae with 8–10 species mostly distributed in the tropics of the World. Its composition and evolutionary relationships were poorly studied. A new molecular phylogeny constructed here using nuclear (ITS) and chloroplast (rbcL, trnK-matK) markers confirmed the monophyly of the genus. Based on ITS analysis, the following well-supported lineages are present within Glinus: the G. bainesii lineage is recovered as sister to the remainder of the genus followed by G. oppositifolius. Three other clades are: G. hirtus with G. orygioides; G. radiatus and G. lotoides; the latter is represented by a sample from North America, and G. zambesiacus as sister to G. setifloru…

Handbook of protocols for standardized measurement of terrestrial invertebrate functional traits

2017

Trait-based approaches are increasingly being used to test mechanisms underlying species assemblages and biotic interactions across a wide range of organisms including terrestrial arthropods and to investigate consequences for ecosystem processes. Such an approach relies on the standardized measurement of functional traits that can be applied across taxa and regions. Currently, however, unified methods of trait measurements are lacking for terrestrial arthropods and related macroinvertebrates (terrestrial invertebrates hereafter). Here, we present a comprehensive review and detailed protocol for a set of 29 traits known to be sensitive to global stressors and to affect ecosystem processes a…

2019

Conflicts between biodiversity conservation and resource production can be mitigated by multi-objective management planning. Optimizing management for multiple objectives over larger land areas likely entails trading off the practicability of the process against the goodness of the solution. It is therefore worthwhile to resolve how large areas are required as management planning regions to reconcile conflicting objectives as effectively as possible. We aimed to reveal how the extent of forestry planning regions impacts the potential to mitigate a forestry-conservation conflict in Finland, represented as a trade-off between harvest income and deadwood availability. We used forecasted data f…

Empirical Bayes improves assessments of diversity and similarity when overdispersion prevails in taxonomic counts with no covariates

2019

Abstract The assessment of diversity and similarity is relevant in monitoring the status of ecosystems. The respective indicators are based on the taxonomic composition of biological communities of interest, currently estimated through the proportions computed from sampling multivariate counts. In this work we present a novel method to estimate the taxonomic composition able to work even with a single sample and no covariates, when data are affected by overdispersion. The presence of overdispersion in taxonomic counts may be the result of significant environmental factors which are often unobservable but influence communities. Following the empirical Bayes approach, we combine a Bayesian mo…

Managing for resilience: an information theory-based approach to assessing ecosystems

2016

Ecosystems are complex and multivariate; hence, methods to assess the dynamics of ecosystems should have the capacity to evaluate multiple indicators simultaneously. Most research on identifying leading indicators of regime shifts has focused on univariate methods and simple models which have limited utility when evaluating real ecosystems, particularly because drivers are often unknown. We discuss some common univariate and multivariate approaches for detecting critical transitions in ecosystems and demonstrate their capabilities via case studies. Synthesis and applications. We illustrate the utility of an information theory-based index for assessing ecosystem dynamics. Trends in this inde…

Assessing Methane Emission and Economic Viability of Energy Exploitation in a Typical Sicilian Municipal Solid Waste Landfill

2018

Sanitary landfills for municipal solid waste (MSW) represent one of the major anthropogenic source of GHGs emissions and are directly responsible of the climate changes we are facing nowadays. Indeed, the biodegradable organic matter of MSW undergoes anaerobic digestion producing the landfill gas (LFG), whose main components are CH4 and CO2. Therefore, biomethane energy exploitation in MSW landfills will reduce GHGs emission positively affecting the global warming. The aim of the present study was to assess the methane production in a Sicilian landfill by comparing the results from field measurements of methane emission and the estimates achieved by applying different mathematical models. A…