Search results for "notation"

showing 10 items of 317 documents

How Does Tremblaya princeps Get Essential Proteins from Its Nested Partner Moranella endobia in the Mealybug Planoccocus citri?

2013

International audience; Many insects maintain intracellular mutualistic symbiosis with a wide range of bacteria which are considered essential for their survival (primary or P-endosymbiont) and typically suffer drastic genome degradation. Progressive loss of P-endosymbiont metabolic capabilities could lead to the recruitment of co-existent facultative endosymbiont (secondary or S-endosymbiont), thus adding more complexity to the symbiotic system. Planococcus citri, among other mealybug species, harbors an unconventional nested endosymbiotic system where every Tremblaya princeps cell (beta-proteobacterium) harbors many Moranella endobia cells (gamma-proteobacterium). In this system, T. princ…

DNA Bacterial[SDV]Life Sciences [q-bio]Planococcus Insectlcsh:MedicineGenomeBacterial genetics03 medical and health sciencesBacterial ProteinsGenome SizeSymbiosisPlanococcus citriAnimalsSymbiosislcsh:ScienceGenome size030304 developmental biologyGenetics0303 health sciencesMultidisciplinarybiology030306 microbiologyHost (biology)lcsh:RBetaproteobacteriaMolecular Sequence AnnotationProkaryoteGene Expression Regulation BacterialSequence Analysis DNAbiology.organism_classificationProtein TransportEssential genelcsh:QGammaproteobacteriaGenome BacterialResearch ArticlePLoS ONE
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PyCellBase, an efficient python package for easy retrieval of biological data from heterogeneous sources.

2019

Background Biological databases and repositories are incrementing in diversity and complexity over the years. This rapid expansion of current and new sources of biological knowledge raises serious problems of data accessibility and integration. To handle the growing necessity of unification, CellBase was created as an integrative solution. CellBase provides a centralized NoSQL database containing biological information from different and heterogeneous sources. Access to this information is done through a RESTful web service API, which provides an efficient interface to the data. Results In this work we present PyCellBase, a Python package that provides programmatic access to the rich RESTfu…

Databases FactualComputer scienceAnnotationBiological databaseRESTfulcomputer.software_genreNoSQLlcsh:Computer applications to medicine. Medical informaticsBiochemistryDatabase03 medical and health sciencesAnnotationUser-Computer Interface0302 clinical medicineInstallationStructural BiologyVariantMolecular Biologylcsh:QH301-705.5030304 developmental biologycomputer.programming_language0303 health sciencesBiological dataDatabaseApplied MathematicsRepositoryComputational BiologyPython (programming language)CellBaseComputer Science Applicationslcsh:Biology (General)Scripting language030220 oncology & carcinogenesislcsh:R858-859.7Web servicecomputerSoftwarePython
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Using Semantics in the Environment for Multiagent-Based Simulation

2014

In this chapter, we carry out an overview and analysis of the usage of semantics to enhance environments in the domain of multiagent-based simulations. Firstly, we take a look at what a multiagent system (MAS) is, and after that we look at the environment for these systems, and why semantics are required in it. Various propositions to put semantics in the environment for MAS are then reviewed, as well as the strengths and weaknesses for these approaches. These propositions are grouped together under two categories, regarding whether the proposed approach is based on only the environment or on both the agents and the environment. The paper is then concluded with findings that have emerged by…

Denotational semanticsProgramming languageComputer scienceSemantics (computer science)Multiagent based simulationcomputer.software_genreComputingMethodologies_ARTIFICIALINTELLIGENCEcomputerOperational semantics
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Determination of aluminum at the parts per billion level by solvent extraction and flame atomic emission spectrometry

1991

A new method for the determination of aluminum at the parts per billion level, by N 2 O/ C 2 H 2 flame emission spectrometry with prior solvent extraction with acetylacetone or 8-hydroxyquinoline in 4-methylpentan-2-one, has been performed. The influence of extraction conditions and instrumental parameters on the sensitivity, precision, and dynamic range of the emission calibration curves have been studied. The limit of detection is between 5 and 10 ppb for both ligands, the variation coefficient being 0.2 and 3% at levels of 75 and 25 ppb, respectively. The method has been applied to the determination of Al in water and the results obtained are compared with those found by the standard add…

Detection limitCalibration curveAcetylacetoneExtraction (chemistry)Parts-per notationAnalytical chemistrychemistry.chemical_elementAnalytical Chemistrychemistry.chemical_compoundchemistryAluminiumLiquid–liquid extractionStandard additionSpectroscopyMicrochemical Journal
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Low-temperature phosphorescence of 1,4-benzodiazepines

1991

Abstract A highly sensitive method for the low-temperature phosphorescence determination of a series of 1,4-benzodiazepines has been developed. Oxazepam has been used as a test molecule to study the effects of instrumental parameters, such as time decay, gate time, excitation and emission slits, and ordinate, on the phosphorescence spectra. The corresponding analytical parameters have been established for different concentration levels. Under the best sensitivity conditions a limit of detection of 16 parts per trillion (ppt) for oxazepam, 3.8 ppt for medazepam, 2 ppt for prazepam, 5 × 10 −3 ppt for diazepam, and 0.09 ppt for lorazepam could be obtained. The proposed method is thus the most …

Detection limitChemistryParts-per notationAnalytical chemistryTime decaySpectral lineAnalytical ChemistryMedazepamOxazepammedicinePhosphorescenceSpectroscopyPrazepammedicine.drugMicrochemical Journal
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Suitability of a content-based retrieval method in astronomical image databases

1996

Abstract Indexing and retrieval methods based on the image content are required to effectively use information from large repositories of digital images. Usually, the way to search for data and images in astronomical archives is via textual queries expressed in terms of constraints on observation parameters. In this paper we present a method for automatic extraction of images by using shape descriptions based on local symmetry. The proposed indexing methodology has been developed and tested inside JACOB, a prototypal system for content-based video database querying.

Digital imageInformation retrievalAutomatic image annotationComputer scienceContent (measure theory)Search engine indexingAstronomy and AstrophysicsVisual WordImage retrievalImage (mathematics)Content based retrievalVistas in Astronomy
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Co-occurrence of discourse markers in English : from juxtaposition to composition

2019

Abstract In this paper, we report on a qualitative analysis of co-occurring discourse markers, that is, sequences of adjacent discourse markers that belong to the same unit but may express different functions. We examine several formal and functional features of these co-occurring strings on the basis of corpus examples extracted from conversational data in English. In particular, we focus on scope, meaning-in-context (or functions), syntactic category and position. Our analysis reveals several degrees of integration: differences in scope allow us to differentiate juxtaposition and combination of markers. In the case of combination, difference in meaning integration allows us to distinguish…

Discourse markers050101 languages & linguisticsLinguistics and LanguageComputer scienceScope05 social sciencesCo-occurrenceDM co-occurrenceCorpus050105 experimental psychologyLanguage and LinguisticsLinguisticsLanguages and LiteraturesFocus (linguistics)AnnotationSyntactic categoryArtificial IntelligenceEnglishPragmatic functions0501 psychology and cognitive sciencesComposition (language)Scope (computer science)Discourse markerMeaning (linguistics)
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Parsimony hierarchies for inductive inference

2004

AbstractFreivalds defined an acceptable programming system independent criterion for learning programs for functions in which the final programs were required to be both correct and “nearly” minimal size. i.e.. within a computable function of being purely minimal size. Kinber showed that this parsimony requirement on final programs limits learning power. However, in scientific inference, parsimony is considered highly desirable. Alim-computable functionis (by definition) one calculable by a total procedure allowed to change its mind finitely many times about its output. Investigated is the possibility of assuaging somewhat the limitation on learning power resulting from requiring parsimonio…

Discrete mathematicsLogic68Q32limiting computable functionComputational learning theoryFunction (mathematics)Inductive reasoningNotationminimal size programConstructivePhilosophyComputable functionComputational learning theoryBounded functionArithmeticOrdinal notationconstructive ordinal notationsMathematics
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Querying Dynamic and Context-Sensitive Metadata in Semantic Web

2005

RDF (core Semantic Web standard) is not originally appropriate for context representation, because of its initial focus on the ordinary Web resources, such as web pages, files, databases, services, etc., which structure and content are more or less stable. However, on the other hand, emerging industrial applications consider e.g. machines, processes, personnel, services for condition monitoring, remote diagnostics and maintenance, etc. to be specific classes of Web resources and thus a subject for semantic annotation. Such resources are naturally dynamic, not only from the point of view of changing values for some attributes (state of resource), but also from the point of view of changing “…

Document Structure DescriptionWeb standardsmedicine.medical_specialtyWeb developmentWeb 2.0Computer scienceRDF Schemacomputer.software_genreSocial Semantic WebWorld Wide WebAnnotationWeb pagemedicineSemantic analyticsSPARQLSemantic Web StackRDFCwmSemantic WebData Webbusiness.industrySemantic Web Rule Languagecomputer.file_formatLinked dataMetadataSemantic gridSimple Knowledge Organization SystemThe InternetWeb serviceWeb resourcebusinesscomputerWeb modeling
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DSL Based Platform for Business Process Management

2014

Currently nearly all commercial and open source BPMS are based on BPMN as a process notation. In contrast, the paper proposes to build a BPMS based on a domain specific language (DSL) as a process notation – DSBPMS. In such a DSBPMS a specific business process support could be created by business analysts. A platform for creating such DSBPMS with feasible efforts is described. This platform contains a Configurator for easy creation of graphical editors for the chosen DSL and a simple mapping language for transforming processes in this DSL to a language directly executable by the execution engine of this platform. The engine includes also all typical execution support functions so no other t…

Domain-specific languageSIMPLE (military communications protocol)Programming languageComputer sciencebusiness.industrycomputer.file_formatcomputer.software_genreBusiness process supportBusiness process managementBusiness Process Model and NotationConfiguratorDigital subscriber lineExecutablebusinesscomputer
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