Search results for "pattern"
showing 10 items of 4203 documents
Genotypic Analysis of E. coli Strains Isolated from Patients with Cystitis and Pyelonephritis
2012
BACKGROUND: Urinary tract infection is the most common health problem affecting millions of people each year, mainly caused by a large genetically heterogeneous group of Escherichia coli called uropathogenic E. coli This study investigates the genotypic analysis of E. coli strains isolated from patients with cystitis and pyelonephritis. METHODS: During 2008-2009, 90 E. coli strains were analyzed, consisting of 48 isolates causing pyelonephritis in children and 42 isolates causing cystitis. Having identified the strains by standard methods, they were subtyped by pulsed field gel electrophoresis (PFGE) and their corresponding patterns were compared using dendrogram. RESULTS: Sixty five PFGE p…
Ectopic hbox12 Expression Evoked by Histone Deacetylase Inhibition Disrupts Axial Specification of the Sea Urchin Embryo
2015
Dorsal/ventral patterning of the sea urchin embryo depends upon the establishment of a Nodal-expressing ventral organizer. Recently, we showed that spatial positioning of this organizer relies on the dorsal-specific transcription of the Hbox12 repressor. Building on these findings, we determined the influence of the epigenetic milieu on the expression of hbox12 and nodal genes. We find that Trichostatin-A, a potent and selective histone-deacetylases inhibitor, induces histone hyperacetylation in hbox12 chromatin, evoking broad ectopic expression of the gene. Transcription of nodal concomitantly drops, prejudicing dorsal/ventral polarity of the resulting larvae. Remarkably, impairing hbox12 …
Early asymmetric cues triggering the dorsal/ventral gene regulatory network of the sea urchin embryo
2014
Dorsal/ventral (DV) patterning of the sea urchin embryo relies on a ventrally-localized organizer expressing Nodal, a pivotal regulator of the DV gene regulatory network. However, the inceptive mechanisms imposing the symmetry-breaking are incompletely understood. In Paracentrotus lividus, the Hbox12 homeodomain-containing repressor is expressed by prospective dorsal cells, spatially facing and preceding the onset of nodal transcription. We report that Hbox12 misexpression provokes DV abnormalities, attenuating nodal and nodal-dependent transcription. Reciprocally, impairing hbox12 function disrupts DV polarity by allowing ectopic expression of nodal. Clonal loss-of-function, inflicted by b…
Gene within gene configuration and expression of the Drosophila melanogaster genes lethal(2) neighbour of tid [l(2)not] and lethal(2) relative of tid…
1997
In this paper, we describe the structure and temporal expression pattern of the Drosophila melanogaster genes l(2)not and l(2)rot located at locus 59F5 vis a vis the tumor suppressor gene l(2)tid described previously and exhibiting a gene within gene configuration. The l(2)not protein coding region, 1530 nt, is divided into two exons by an intron, 2645 nt, harboring the genes l(2)rot, co-transcribed from the same DNA strand, and l(2)tid, co-transcribed from the opposite DNA strand, located vis a vis. To determine proteins encoded by the genes described in this study polyclonal rabbit antibodies (Ab), anti-Not and anti-Rot, were generated. Immunostaining of developmental Western blots with t…
An organizing region in metamorphosing hydrozoan planula larvae--stimulation of axis formation in both larval and in adult tissue.
2010
A novel wingless gene was isolated from the marine colonial hydroid Hydractinia echinata. Alignments and Bayesian inference analysis clearly assign the gene to the Wnt5A group. In line with data found for the brachyury ortholog of Hydractinia, He-wnt5A is expressed during metamorphosis in the posterior tip of the spindle-shaped planula larva, suggesting that the tip functions as a putative organizer during metamorphosis. Additionally, the outermost cells of the posterior tip are omitted from apoptosis during metamorphosis. In order to investigate this putative organizer function, we transplanted the posterior tip of metamorphosing animals into non-induced larvae and into primary polyps 24 h…
Boosting Hankel matrices for face emotion recognition and pain detection
2017
HighligthsDynamics of face expression descriptors are modeled for emotion recognition.A set of Hankel matrices is built upon several multi-scale face representations.Boosting and random subspace projection are used for dynamics selection.Dynamics of Haar-like features and Gabor Energies are compared.Fine-grained dynamics of subtle expressions can be modeled at small spatial scales. Studies in psychology have shown that the dynamics of emotional expressions play an important role in face emotion recognition in humans. Motivated by these studies, in this paper the dynamics of face expressions are modeled and used for automatic emotion recognition and pain detection.Given a temporal sequence o…
Ensemble of Hankel Matrices for Face Emotion Recognition
2015
In this paper, a face emotion is considered as the result of the composition of multiple concurrent signals, each corresponding to the movements of a specific facial muscle. These concurrent signals are represented by means of a set of multi-scale appearance features that might be correlated with one or more concurrent signals. The extraction of these appearance features from a sequence of face images yields to a set of time series. This paper proposes to use the dynamics regulating each appearance feature time series to recognize among different face emotions. To this purpose, an ensemble of Hankel matrices corresponding to the extracted time series is used for emotion classification withi…
Application of GPS tracking for monitoring spatially unconstrained outdoor recreational activities in protected areas – A case study of ski touring i…
2018
Abstract New trends in leisure and outdoor recreation show an increased penetration of remote areas and the development of spatially unconstrained outdoor recreational activities. Here we present the application of GPS tracking to monitor a spatially unconstrained recreational activity, using ski touring in the Tatra National Park (TNP) as a study case. Particular focus of the study was the spatial and temporal behaviour of ski tourers with regard to existing management measures implemented in the Park, where recreation is limited to designated zones. The research is based upon empirical data (n = 427 ski touring GPS tracks). ArcGIS and statistics software SPSS were used for spatial and sta…
New molecular data attest to the absence of cospeciation patterns between Placobdella costata (Fr. Müller, 1846) (Hirudinea) and freshwater turtles (…
2021
The only Palearctic representative of the leech genus Placobdella Blanchard, 1893 is P. costata, an ectoparasite of freshwater turtles. To date, no conclusive evidence about the possible presence of coevolutionary patterns between this leech and its turtle hosts is available due to the paucity of DNA sequence data available for P. costata; moreover, comparative host data is also mostly lacking, making any inferences more difficult. The discovery of new populations of the species in northern Italy and Sicily allowed us to generate novel mitochondrial DNA sequences and to compare the topology of the resulting phylogenetic trees with the phylogeny of the turtle hosts occurring in the study are…
Linear spectral mixture modelling to estimate vegetation amount from optical spectral data
1996
Abstract Spectral mixture modelling has developed in recent years as a suitable remote sensing tool for analysing the biophysical and compositional character of ground surfaces. In this paper the potentiality of the linear spectral mixture model to extract vegetation related parameters from 0·4-2·5 μm reflectance data has been tested. High spectral resolution reflectance measurements of soil-plant mixtures with different soil colour and plant densities were carried out in a laboratory experiment. The constrained least-squares and the factor analysis unmixing procedures were applied to generate endmember fractions of the components present in the mixtures and to test the validity of the mode…