Search results for "photobiont"

showing 4 items of 4 documents

Thallus Growth Stage and Geographic Origin Shape Microalgal Diversity in Ramalina farinacea Lichen Holobionts

2021

Lichen symbioses are microecosystems hosting many other living organisms besides the two major lichen symbionts (i.e., lichenized fungi [the mycobiont] and green microalgae or cyanobacteria [the photobiont]). Recent investigations evidenced that other fungi, non-photosynthetic bacteria, and microalgae co-inhabit within the lichen thalli, but their diversity and their roles are still underinvestigated. Here we present an ad hoc stratified sampling design and in-depth Illumina paired-end metabarcoding approach to explore microalgal diversity in lichen thalli of the model species Ramalina farinacea from different ecologies. Lichen thalli were surveyed according to three different sizes, and di…

0106 biological sciencesTrebouxiaCyanobacteriasymbiosimycobiontLichensmedia_common.quotation_subjectLichenPlant ScienceAquatic Sciencehigh-throughput sequencing; metabarcoding; mycobiont; photobiont; symbiosis; Trebouxia; Symbiosis; Ascomycota; Chlorophyta; Lichens; Microalgae010603 evolutionary biology01 natural sciencesRamalina farinaceaSymbiosisAscomycotaChlorophytaBotanyMicroalgaeLichenSymbiosismedia_commonbiology010604 marine biology & hydrobiologyhigh-throughput sequencingbiology.organism_classificationThallusHabitatmetabarcodingTrebouxiaphotobiontDiversity (politics)
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Unexpected associated microalgal diversity in the lichen Ramalina farinacea is uncovered by pyrosequencing analyses

2017

The current literature reveals that the intrathalline coexistence of multiple microalgal taxa in lichens is more common than previously thought, and additional complexity is supported by the coexistence of bacteria and basidiomycete yeasts in lichen thalli. This replaces the old paradigm that lichen symbiosis occurs between a fungus and a single photobiont. The lichen Ramalina farinacea has proven to be a suitable model to study the multiplicity of microalgae in lichen thalli due to the constant coexistence of Trebouxia sp. TR9 and T. jamesii in long-distance populations. To date, studies involving phycobiont diversity within entire thalli are based on Sanger sequencing, but this method see…

0301 basic medicinelcsh:MedicineLichenologyArtificial Gene Amplification and ExtensionPlant SciencePolymerase Chain ReactionDatabase and Informatics MethodsDiversity indexMicroalgaeCluster AnalysisDNA Fungallcsh:ScienceLichenPhylogenyData ManagementMultidisciplinaryEcologybiologyEcologyPhylogenetic AnalysisBiodiversitysymbiosisThallusPhylogeneticspyrosequencingLichenologyTrebouxiaSequence AnalysisResearch ArticleTrebouxiaComputer and Information SciencesBioinformaticsSequence DatabasesReal-Time Polymerase Chain ReactionResearch and Analysis MethodslichenRamalina farinacea03 medical and health sciencesAscomycotaAlgaelichen photobionts pyrosequencing symbiosis TrebouxiaBotanyEvolutionary SystematicsMolecular Biology TechniquesMolecular BiologyDNA sequence analysisTaxonomyEvolutionary BiologyEcology and Environmental Scienceslcsh:RGenetic VariationBiology and Life SciencesSequence Analysis DNAReverse Transcriptase-Polymerase Chain Reactionbiology.organism_classificationBiological Databases030104 developmental biologyphotobiontsPyrosequencinglcsh:QSequence AlignmentPLOS ONE
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Promiscuity in Lichens Follows Clear Rules: Partner Switching in Cladonia Is Regulated by Climatic Factors and Soil Chemistry

2022

Climatic factors, soil chemistry and geography are considered as major factors affecting lichen distribution and diversity. To determine how these factors limit or support the associations between the symbiotic partners, we revise the lichen symbiosis as a network of relationships here. More than one thousand thalli of terricolousCladonialichens were collected at sites with a wide range of soil chemical properties from seven biogeographical regions of Europe. A total of 18 OTUs of the algal genusAsterochlorisand 181 OTUs ofCladoniamycobiont were identified. We displayed all realized pairwise mycobiont–photobiont relationships and performed modularity analysis. It revealed four virtually sep…

Microbiology (medical)CladoniaAsterochlorisspecificityphotobiontlichensMicrobiologysymbiosisQR1-502Frontiers in Microbiology
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Molecular phylogeny and ultrastructure of the lichen microalga Asterochloris mediterranea sp. nov. from Mediterranean and Canary Islands ecosystems

2015

The microalgae of the genus Asterochloris are the preferential phycobionts in Cladonia, Lepraria and Stereocaulon lichens. Recent studies have highlighted the hidden diversity of the genus, even though phycobionts hosting Cladonia spp. in Mediterranean and Canarian ecosystems have been poorly explored. Phylogenetic analyses were made by concatenation of the sequences obtained with a plastid -LSU rDNA- and two nuclear -ITS rDNA and actin- molecular markers of the phycobionts living in several populations of Cladonia convoluta-C. foliacea complex, C. rangiformis and C. cervicornis species widely distributed in these areas in a great variety of substrata and habitats. A new strongly supported …

food.ingredientDNA PlantLichensMolecular Sequence DataBOTANICAMicrobiologySPECIES DELIMITATIONfoodAscomycotaGenusPhylogeneticsChlorophytaSCHIZOSACCHAROMYCES-POMBEBotanyDNA Ribosomal SpacerInternal transcribed spacerLichenEcology Evolution Behavior and SystematicsPhylogenyBIOLOGIA VEGETALCladoniabiologySECONDARY STRUCTUREMediterranean RegionStereocaulonPHOTOBIONT DIVERSITYGenetic VariationGeneral MedicineSequence Analysis DNAbiology.organism_classification2 ITS2INTERNAL TRANSCRIBED SPACERSpainCLADONIA-ARBUSCULAMolecular phylogeneticsTREBOUXIA ALGAENucleic Acid ConformationGENETIC DIVERSITYLeprariaRIBOSOMAL-RNA
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