Search results for "pit"

showing 10 items of 9314 documents

Immunity and the emergence of virulent pathogens.

2013

6 pages; International audience; The emergence/re-emergence of infectious diseases has been one of the major concerns for human and wildlife health. In spite of the medical and veterinary progresses as to prevent and cure infectious diseases, during the last decades we have witnessed the emergence/re-emergence of virulent pathogens that pose a threat to humans and wildlife. Many factors that might drive the emergence of these novel pathogens have been identified and several reviews have been published on this topic in the last years. Among the most cited and recognized drivers of pathogen emergence are climate change, habitat destruction, increased contact with reservoirs, etc. These factor…

0106 biological sciencesMicrobiology (medical)[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyWildlifeVirulenceBiology[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunologyCommunicable Diseases Emerging010603 evolutionary biology01 natural sciencesMicrobiologyParasite diversity03 medical and health sciencesImmune systemDisease severityImmunityImmune-mediated selection[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisGeneticsAnimalsHumansParasites[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biology[ SDE.BE ] Environmental Sciences/Biodiversity and Ecology0303 health sciencesVirulenceEcology15. Life on land3. Good healthVaccinationInfectious DiseasesHabitat destruction[SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunology13. Climate actionHost-Pathogen InteractionsSpite[SDE.BE]Environmental Sciences/Biodiversity and EcologyImmune-suppression[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Going underground: short- and long-term movements may reveal the fossorial spatial ecology of an amphisbaenian

2021

[Background]: The movement and spatial ecology of an animal depends on its morphological and functional adaptations to its environment. In fossorial animals, adaptations to the underground life help to face peculiar ecological challenges, very different from those of epigeal species, but may constrain their movement ability.

0106 biological sciencesMovement patternsEcology (disciplines)010603 evolutionary biology01 natural sciencesAmphisbaenians03 medical and health sciencesSpace useTrogonophis wiegmannilcsh:QH301-705.5PIT tag telemetryEcology Evolution Behavior and Systematics030304 developmental biology0303 health sciencesMovement (music)EcologyResearchSpace useFossorialTerm (time)Geographylcsh:Biology (General)Animal ecologyFossorial reptilesSpatial ecologyEpigeal
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Molecular phylogeny of the marine dinoflagellate genus Heterodinium (Dinophyceae)

2012

The dinoflagellate genus Heterodinium has unusual morphological characters such as a mid-ventral intercalary plate with a pore, a small plate in the left side of the dorsal epitheca, three antapical plates, and a well-developed anterior cingular list. We obtained the first SSU rDNA sequences from single cells of six species of Heterodinium from Mediterranean coastal and open waters. They included the type species H. scrippsii and H. rigdeniae and representatives of the other subgenera, Sphaerodinium (H. doma, H. milneri, H. globosum) and Platydinium (H. pavillardii). SSU rDNA phylogeny showed that Heterodinium spp. formed a well-supported monophyletic group (100% bootstrap support) composed…

0106 biological sciencesPeridiniales0303 health sciencesbiologyPlant ScienceAquatic Sciencebiology.organism_classification010603 evolutionary biology01 natural sciencesGymnodiniales03 medical and health sciencesEpithecaMonophylyType speciesGenusBotanyMolecular phylogenetics14. Life underwater[SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography030304 developmental biologyDinophyceae
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Estimation of fitness from energetics and life-history data: An example using mussels.

2017

Changing environments have the potential to alter the fitness of organisms through effects on components of fitness such as energy acquisition, metabolic cost, growth rate, survivorship, and reproductive output. Organisms, on the other hand, can alter aspects of their physiology and life histories through phenotypic plasticity as well as through genetic change in populations (selection). Researchers examining the effects of environmental variables frequently concentrate on individual components of fitness, although methods exist to combine these into a population level estimate of average fitness, as the per capita rate of population growth for a set of identical individuals with a particul…

0106 biological sciencesPhenotypic plasticityEcology010604 marine biology & hydrobiologyBiology010603 evolutionary biology01 natural sciencesSurvivorship curveStatisticsPer capitaPopulation growthProduction (economics)Set (psychology)Ecology Evolution Behavior and SystematicsSelection (genetic algorithm)OrganismNature and Landscape ConservationEcology and evolution
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The grapevine flagellin receptor VvFLS2 differentially recognizes flagellin-derived epitopes from the endophytic growth-promoting bacterium Burkholde…

2014

International audience; The role of flagellin perception in the context of plant beneficial bacteria still remains unclear. Here, we characterized the flagellin sensing system flg22-FLAGELLIN SENSING 2 (FLS2) in grapevine, and analyzed the flagellin perception in the interaction with the endophytic plant growth-promoting rhizobacterium (PGPR) Burkholderia phytofirmans. The functionality of the grapevine FLS2 receptor, VvFLS2, was demonstrated by complementation assays in the Arabidopsis thaliana fls2 mutant, which restored flg22-induced H2O2 production and growth inhibition. Using synthetic flg22 peptides from different bacterial origins, we compared recognition specificities between VvFLS2…

0106 biological sciencesPhysiologyBurkholderia phytofirmans[SDV]Life Sciences [q-bio]flg22ArabidopsisColony Count MicrobialPlant Sciencemedicine.disease_cause01 natural sciencesEpitopesArabidopsisEndophytesArabidopsis thalianaPlant ImmunityVitisDisease ResistancePlant Proteins0303 health sciencesbiologyBurkholderia phytofirmansmicrobe-associated molecular pattern (MAMP)Xanthomonas campestrisPGPR[SDE]Environmental SciencesBotrytispattern recognition receptor (PRR)BurkholderiaMolecular Sequence DataContext (language use)Receptors Cell SurfaceMicrobiology03 medical and health sciencesSpecies Specificitymedicine[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyComputer SimulationAmino Acid Sequenceflagellin sensing030304 developmental biologyPlant DiseasesfungiCell MembraneGenetic Complementation TestPathogenic bacteriabiology.organism_classificationVitis viniferaMutationbiology.proteinReactive Oxygen SpeciesFlagellinBacteria010606 plant biology & botanyFlagellinThe New phytologistReferences
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Purification and characterization of geranyl diphosphate synthase from Vitis vinifera L. cv Muscat de Frontignant cell cultures

1993

A geranyl diphosphate synthase (EC 2.5.1.1), which catalyzes the formation of geranyl diphosphate from dimethylallyl diphosphate and isopentenyl diphosphate, was isolated from Vitis vinifera L. cv Muscat de Frontignan cell cultures. Purification of the enzyme was achieved successively by ammonium sulfate precipitation and chromatography on DEAE-Sephacel, hydroxylapatite, Mono Q, Phenyl Superose, Superose 12, and preparative nondenaturing polyacrylamide gels. The enzyme formed only geranyl diphosphate as a product. In all cases, neither neryl diphosphate, the cis isomer, nor farnesyl diphosphate was detected. The enzyme showed a native molecular mass of 68 [plus or minus] 5 kD as determined …

0106 biological sciencesPhysiologyStereochemistry[SDV]Life Sciences [q-bio]PolyacrylamidePlant Science01 natural sciencesCofactor[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health scienceschemistry.chemical_compound[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsGeneticsSodium dodecyl sulfateAmmonium sulfate precipitationComputingMilieux_MISCELLANEOUS030304 developmental biologychemistry.chemical_classification0303 health sciencesbiologyMolecular mass[SDV] Life Sciences [q-bio]EnzymechemistryCell cultureCULTURE DE CELLULEbiology.proteinCis–trans isomerism010606 plant biology & botanyResearch Article
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Detection of Allee effects in marine fishes: analytical biases generated by data availability and model selection

2017

The demographic Allee effect, or depensation, implies positive association between per capita population growth rate and population size at low abundances, thereby lowering growth ability of sparse populations. This can have far-reaching consequences on population recovery ability and colonization success. In the context of marine fishes, there is a widespread perception that Allee effects are rare or non-existent. However, studies that have failed to detect Allee effects in marine fishes have suffered from several fundamental methodological and data limitations. In the present study, we challenge the prevailing perception about the rarity of Allee effects by analysing nine populations of …

0106 biological sciencesPopulation DynamicsAtlantic herringBiologyModels Biological010603 evolutionary biology01 natural sciencesPopulation densityGeneral Biochemistry Genetics and Molecular BiologycompensationDepensationsymbols.namesakePer capitaAnimalsPopulation growth14. Life underwaterClupea harengusPopulation GrowthGeneral Environmental ScienceAllee effectlow-abundance dynamicsPopulation DensityModels StatisticalEcologyGeneral Immunology and MicrobiologyEcology010604 marine biology & hydrobiologyModel selectionPopulation sizestock–recruitment relationshipFishesBayes TheoremGeneral MedicineData availabilitydepensationsymbolsta1181General Agricultural and Biological SciencesProceedings of the Royal Society B: Biological Sciences
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An Empirical Evaluation of the Utility of Convex Hull and Standard Ellipse Areas for Assessing Population Niche Widths from Stable Isotope Data

2013

Stable isotope analyses are increasingly employed to characterise population niche widths. The convex hull area (TA) in a δ¹³C–δ¹⁵N biplot has been used as a measure of isotopic niche width, but concerns exist over its dependence on sample size and associated difficulties in among-population comparisons. Recently a more robust method was proposed for estimating and comparing isotopic niche widths using standard ellipse areas (SEA), but this approach has yet to be tested with empirical stable isotope data. The two methods measure different kind of isotopic niche areas, but both are now widely used to characterise isotopic niche widths of populations. We used simulated data and an extensive e…

0106 biological sciencesPopulation Dynamicslcsh:MedicinePopulation Modeling01 natural sciencesTheoretical EcologyFood Web StructureStatisticsRange (statistics)lcsh:ScienceFreshwater EcologyCarbon Isotopeseducation.field_of_studyMultidisciplinaryEcologyδ13CEcologyStable isotope ratioStatisticsFishesBiogeochemistryisotopic nicheTrophic Interactionstrophic nicheCommunity Ecologyconvex hullResearch ArticlePopulationNichestable isotopesBiostatistics010603 evolutionary biologyNiche ConstructionNormal distributionBayesian ellipse areavakaat isotoopitAnimals14. Life underwaterStatistical MethodseducationBiologyEcological nicheNitrogen Isotopes010604 marine biology & hydrobiologylcsh:RComputational BiologySpecies InteractionsSample size determinationSample SizeravintolokeroEnvironmental scienceta1181lcsh:QPopulation EcologyEcosystem ModelingMathematicsPLOS ONE
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Depuration of geosmin- and 2-methylisoborneol-induced off-flavors in recirculating aquaculture system (RAS) farmed European whitefish Coregonus lavar…

2019

European whitefish Coregonus lavaretus has increasingly become an important species for aquatic food production, especially in the Nordic countries. Whitefish is produced in traditional cage and pond operations, and in recirculating aquaculture system (RAS) in which, unfortunately, off-flavors and odors, mostly caused by geosmin (GSM) and 2-methylisoborneol (MIB), can accumulate in fish flesh from the circulating water. GSM and MIB have very low human sensory detection limits and, therefore, often disliked by consumers even at low concentrations. In this study, concentrations of GSM and MIB in RAS farmed European whitefish were studied by an analytical method based on headspace solid phase …

0106 biological sciencesRAS farmingBiology01 natural scienceshajuchemistry.chemical_compoundfoodCoregonus lavaretusFood sciencevesiviljely (kalatalous)Volume concentrationfood.dish2-methylisoborneol010604 marine biology & hydrobiologyFleshRecirculating aquaculture system04 agricultural and veterinary sciencesvedenlaatuGeosmindepurationchemistryEuropean whitefishsiikapitoisuus040102 fisheries0401 agriculture forestry and fisheriesgeosmin2-Methylisoborneolmaku (aineen ominaisuudet)Food Science
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Persistence of remnant boreal plants in the Chiricahua Mountains, southern Arizona

2020

Abstract Boreal plants growing along the southern edge of their range on isolated mountains in a hot desert matrix live near the extreme of their physiological tolerance. Such plants are considered sensitive to small changes in climate. We coupled field observations (1974, 1993, 2019) about the abundance and vigor of small populations of ten remnant boreal plant species persisting in the uppermost elevations of spruce-fir forests of the Chiricahua Mountains, together with modeling of the species sensitivities to three stress factors associated with climatic change: warming, drought, and forest fire, in order to explore the persistence of frontier boreal plant species during climate change. …

0106 biological sciencesRange (biology)PopulationClimate changeWarming toleranceRubus parviflorusVaccinium myrtillus010603 evolutionary biology01 natural sciencesClimate warmingfoodAbundance (ecology)lcsh:QH540-549.5PrecipitationeducationEcology Evolution Behavior and SystematicsNature and Landscape ConservationPlant traitseducation.field_of_studyEcologybiologyDroughtEcology010604 marine biology & hydrobiologyfood and beveragesSmall population sizeForest firebiology.organism_classificationfood.foodBorealEnvironmental sciencelcsh:EcologyRemnant boreal plants
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