Search results for "pit"

showing 10 items of 9314 documents

Speleothems from the Middle East: An Example of Water Limited Environments in the SISAL Database

2019

The Middle East (ME) spans the transition between a temperate Mediterranean climate in the Levant to hyper-arid sub-tropical deserts in the southern part of the Arabian Peninsula (AP), with the complex alpine topography in the northeast feeding the Euphrates and Tigris rivers which support life in the Southeastern Fertile Crescent (FC). Climate projections predict severe drying in several parts of the ME in response to global warming, making it important to understand the controls of hydro-climate perturbations in the region. Here we discuss 23 ME speleothem stable oxygen isotope (δ18Occ) records from 16 sites from the SISAL_v1 database (Speleothem Isotope Synthesis and Analysis database), …

010506 paleontologygeology010504 meteorology & atmospheric sciencesPleistoceneδ18OCaveSpeleothemlcsh:GN281-289Palaeoclimatecomputer.software_genre01 natural sciencesMiddle Eastlcsh:StratigraphyIsotopesEarth and Planetary Sciences (miscellaneous)DeglaciationPrecipitationHolocenelcsh:QE640-6990105 earth and related environmental sciencesEarth-Surface Processesgeographygeography.geographical_feature_categoryDatabaseGlobal warmingLast Glacial MaximumSpeleothemlcsh:Human evolutionSISAL databasecomputerGeology
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Trophic state changes can affect the importance of methane-derived carbon in aquatic food webs

2017

Methane-derived carbon, incorporated by methane-oxidizing bacteria, has been identified as a significant source of carbon in food webs of many lakes. By measuring the stable carbon isotopic composition (δ13C values) of particulate organic matter, Chironomidae andDaphniaspp. and their resting eggs (ephippia), we show that methane-derived carbon presently plays a relevant role in the food web of hypertrophic Lake De Waay, The Netherlands. Sediment geochemistry, diatom analyses and δ13C measurements of chironomid andDaphniaremains in the lake sediments indicate that oligotrophication and re-eutrophication of the lake during the twentieth century had a strong impact on in-lake oxygen availabili…

0106 biological sciences010504 meteorology & atmospheric scienceshiili580 Plants (Botany)01 natural sciencesDaphniaNutrientlakesEphippiaNetherlandsGeneral Environmental ScienceTrophic levelTotal organic carbonCarbon IsotopesEcologybiologyEcologyrehevöityminenmethaneGeneral MedicineCladoceraFood webeutrophicationinternationalGeneral Agricultural and Biological SciencesFood Chain530 Physicsta1172chemistry.chemical_elementjärvetmetaaniChironomidaestable carbon isotopesGeneral Biochemistry Genetics and Molecular BiologyAnimalssurviaissääsketisotopes0105 earth and related environmental sciencesisotoopitGeneral Immunology and Microbiologycarbon010604 marine biology & hydrobiologybiology.organism_classificationDaphniachemistryfood websvesikirputta1181Environmental scienceEutrophicationCarbonravintoverkotProceedings of the Royal Society B: Biological Sciences
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The effect of buffer strip width and selective logging on streamside polypore communities

2020

Preserving streamside forest habitats or buffer strips is considered to reduce forestry-related biodiversity loss in commercial forest landscapes. However, it is still unclear what type of management in and near streamside forests can be undertaken without compromising their biodiversity and natural change through succession. Using a before–after, control–impact study design, we tested the impacts of forested buffer strips (15 or 30 m wide, with or without selective logging), preserved after clear-cutting, on the changes of polypore communities in streamside boreal forests in Finland. Manipulations in 28 sites produced four treatment classes, the community compositions of which were compar…

0106 biological sciences010504 meteorology & atmospheric sciencesriparian forestBiodiversityBuffer stripbuffer zonekelopuutluontotyypitharvennus010603 evolutionary biology01 natural sciencessuoja-alueetPolyporekey habitatmonimuotoisuus0105 earth and related environmental sciencespartial harvestingGlobal and Planetary ChangedeadwoodEcologybiologyLoggingForestryForestrybiology.organism_classificationmetsätHabitatEnvironmental science
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Comment on the letter of the Society of Vertebrate Paleontology (SVP) dated April 21, 2020 regarding “Fossils from conflict zones and reproducibility…

2020

International audience

0106 biological sciences010506 paleontologyNETHERLANDSARTHROPITYS-BISTRIATAAREACENTRAL-EUROPEPaleontologyPERMIAN PETRIFIED FORESTSAAR-NAHE BASIN010603 evolutionary biology01 natural sciencesArchaeologyPaleontologíaBALTIC AMBEREvoluciónGeographyPARNAIBA BASINSaar–Nahe BasinTHEROPOD DINOSAURBaltic amberDECAPODAVertebrate paleontology[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciences
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Taxonomic and nomenclatural revision of Carlos Pau’s names in Hieracium (Asteraceae)

2019

During a study on the taxonomy of Hieracium for the Flora iberica project, several names turned out to be not yet typified. In the present paper, 63 names of Hieracium are treated. In order to fix their applications, nomenclatural types for 28 Pau’s names in the genus Hieracium are designated (27 lectotypes, 1 neotype and 1 epitype). All the type material available is listed with full label data, and some nomenclatural and taxonomic comments are provided.

0106 biological sciences0301 basic medicineCompositaeLectotypesPlant Science010603 evolutionary biology01 natural sciences03 medical and health sciencesCichorieaeHieraciumEudicotsNomenclatureEcology Evolution Behavior and SystematicsTaxonomyHieraciumbiologyNomenclatureAsteraceaebiology.organism_classificationNeotypeGenealogy030104 developmental biologyEpitypeCichorieaeTaxonomy (biology)Eudicots
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Throwing down a genomic gauntlet on fisheries-induced evolution

2021

Beginning with studies on crypsis and camouflage, the hypothesis that predators can generate evolutionary change in their prey has a long and rich history (1). Few predators, however, rival humans in their potential to generate selection responses and concomitant phenotypic change on contemporary timescales. In the 1930s, J. B. S. Haldane (2) mused that fishing would be an ideal candidate for such “observable evolution” within a human lifetime, proceeding “with extreme and abnormal speed.” However, it was not until the late 1970s that research on fisheries-induced evolution (FIE) gained a substantive scientific foothold, beginning with thought-provoking work on Canadian whitefish ( Coregonu…

0106 biological sciences0301 basic medicineCoregonus clupeaformisFishingFisheriesevoluutioBiodiversity437430Polymorphism Single Nucleotide010603 evolutionary biology01 natural sciencesPredation03 medical and health sciencesPer capitaAnimals14. Life underwaterSemelparity and iteroparityPopulation DensityMultidisciplinaryPopulation BiologybiologykalakannatFishesGenomicsgenomiikkaBiological Sciencesbiology.organism_classificationBiological EvolutionkalastusFisherykalatalousOverexploitation030104 developmental biologyCrypsisCommentaryProceedings of the National Academy of Sciences
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Evolving by deleting: patterns of molecular evolution of Apple stem pitting virus isolates from Poland

2019

In this study, 267 coat protein gene (CP) sequences from 48 Polish isolates of Apple stem pitting virus (ASPV) were determined. The genetic structure of the virus population was analysed and possible mechanisms of molecular evolution explored. We found evidence of recombination within the ASPV population and the presence of 17 ASPV molecular variants that differ in the length, number and arrangement of deletions in the CP. Population genetic analyses showed significant variation among isolates from pear and apple trees, between isolates from the same host species and, more interestingly, within isolates, supporting the existence of significant levels of variability within individual hosts, …

0106 biological sciences0301 basic medicinePopulation geneticsPopulationPopulation geneticsViral quasispecies01 natural sciences03 medical and health sciencesMolecular evolutionVirologyDeletionsCladeeducationGeneticseducation.field_of_studyPhylogenetic analysisbiologyPhylogenetic treebiology.organism_classificationVirologyRecombinationApple stem pitting virusASPV030104 developmental biologyCP geneGenetic structure010606 plant biology & botany
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Functional characterization of the chaperon-like protein Cdc48 in cryptogein-induced immune response in tobacco

2017

SPEIPMUBINRASUPDATDOCT; Cdc48, a molecular chaperone conserved in different kingdoms, is a member of the AAA+ family contributing to numerous processes in mammals including proteins quality control and degradation, vesicular trafficking, autophagy and immunity. The functions of Cdc48 plant orthologues are less understood. We previously reported that Cdc48 is regulated by S-nitrosylation in tobacco cells undergoing an immune response triggered by cryptogein, an elicitin produced by the oomycete Phytophthora cryptogea. Here, we inv estigated the function of NtCdc48 in cryptogein signalling and induced hypersensitive-like cell death. NtCdc48 was found to accumulate in elicited cells at both th…

0106 biological sciences0301 basic medicineProgrammed cell deathPhysiologyImmunoprecipitationNitrosation[SDV]Life Sciences [q-bio]PopulationPlant ScienceBiologyBioinformatics01 natural sciencesdefence responsescryptogeinFungal Proteins03 medical and health sciencesImmune systemGene Expression Regulation PlantValosin Containing ProteinPlant CellsTobaccoRNA MessengereducationPlant ProteinsRegulation of gene expressioneducation.field_of_studyFungal protein[ SDV ] Life Sciences [q-bio]AutophagyElicitinCell biology030104 developmental biologycell deathChromatography GelCdc48 partnersNtCdc48Protein Binding010606 plant biology & botany
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The Histone Marks Signature in Exonic and Intronic Regions Is Relevant in Early Response of Tomato Genes to Botrytis cinerea and in miRNA Regulation

2020

Research into the relationship between epigenetic regulation and resistance to biotic stresses provides alternatives for plant protection and crop improvement. To unravel the mechanisms underlying tomato responses to Botrytis cinerea, we performed a chromatin immunoprecipitation (ChIP) analysis showing the increase in H3K9ac mark along the early induced genes SlyDES, SlyDOX1, and SlyLoxD encoding oxylipin-pathway enzymes, and SlyWRKY75 coding for a transcriptional regulator of hormonal signaling. This histone mark showed a more distinct distribution than the previously studied H3K4me3. The RNAPol-ChIP analysis reflected the actual gene transcription associated with increased histone modific…

0106 biological sciences0301 basic medicinePseudomonas syringaeMiRNA bindingPlant ScienceBiology<i>pseudomonas syringae</i>01 natural sciencesTomato03 medical and health sciencesBotrytis cinerealcsh:BotanyTomàquetsTranscriptional regulationEpigeneticsGeneEcology Evolution Behavior and SystematicsBotrytis cinereamiRNAGeneticsEcologyHistone modificationsfungifood and beveragesFongs patògensbiology.organism_classificationChromatin immunoprecipitationlcsh:QK1-989030104 developmental biologyHistone<i>botrytis cinerea</i>biology.proteinRNAH3K4me3EpigeneticsChromatin immunoprecipitation010606 plant biology & botany
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Female sexual signaling in a capital breeder, the European glow-worm Lampyris noctiluca

2021

AbstractTheory predicts that because costs constrain female sexual signaling, females are expected to have a low signaling effort that is increased with passing time until mating is secured. This pattern of signaling is expected to result from females balancing the costs associated with a higher than optimal signaling effort and those costs associated with a low signaling effort that increase the likelihood of delayed mating. We tested whether this prediction applies in the common glow-worm Lampyris noctiluca (Coleoptera, Lampyridae), a capital breeding species in which females glow at night to attract males. Contrary to predictions, we found that the duration of female sexual signaling sig…

0106 biological sciences0301 basic medicineaviationSexual signaling costsFemale sexual selectioneläinten käyttäytyminen010603 evolutionary biology01 natural sciences03 medical and health sciencessignaalitLampyridaeMatingEcology Evolution Behavior and SystematicsCapital breedinglisääntymiskäyttäytyminen030102 biochemistry & molecular biologybiologyFemale sexual signalingbiology.organism_classificationBreeder (cellular automaton)aviation.aircraft_modelsukupuolivalintaAnimal ecologyInsect ScienceCapital (economics)kiiltomadotLampyris noctilucaLampyris noctilucaLampyridaeDemography
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