Search results for "prefix"
showing 10 items of 57 documents
Quando la malattia nasce, cresce e muore «con» (συν-) il paziente. Terminologia del male congenito nel Corpus ippocratico
2019
The present study aims to investigate the use and semantics of the most common terminology used by the medical writers of the Hippocratic Collection in order to define diseases commonly considered to be of a “congenital” nature, with particular attention to nominal as well as verbal forms, composed by the prefixation syn-, indicating the different stages of the pathological process according to which disease is represented as a proper entity claimed to arise inside the patient, to develop, to became old and then also to die together with him or her. Individual constitution, familiarity, epigenetic factors such as conditions of growth during gestation or climatic conditions, age of the patie…
Universal Lyndon Words
2014
A word w over an alphabet Σ is a Lyndon word if there exists an order defined on Σ for which w is lexicographically smaller than all of its conjugates (other than itself). We introduce and study universal Lyndon words, which are words over an n-letter alphabet that have length n! and such that all the conjugates are Lyndon words. We show that universal Lyndon words exist for every n and exhibit combinatorial and structural properties of these words. We then define particular prefix codes, which we call Hamiltonian lex-codes, and show that every Hamiltonian lex-code is in bijection with the set of the shortest unrepeated prefixes of the conjugates of a universal Lyndon word. This allows us t…
An automata-theoretic approach to the study of the intersection of two submonoids of a free monoid
2008
We investigate the intersection of two finitely generated submonoids of the free monoid on a finite alphabet. To this purpose, we consider automata that recognize such submonoids and we study the product automata recognizing their intersection. By using automata methods we obtain a new proof of a result of Karhumaki on the cha- racterization of the intersection of two submonoids of rank two, in the case of prefix (or suffix) generators. In a more general setting, for an arbitrary number of generators, we prove that if H and K are two finitely generated submonoids generated by prefix sets such that the product automaton associated to H ∩ K has a given special property then �(H ∩ K) ≤ �(H)�(K…
Periodicity vectors for labelled trees
2003
AbstractThe concept of a periodicity vector is introduced in the context of labelled trees, and some new periodicity theorems are obtained. These results constitute generalizations of the classical periodicity theorem of Fine and Wilf for words. The concept of a tree congruence is also generalized and the isomorphism between the lattice of tree congruences and the lattice of unlabelled trees (prefix codes) is established.
On the size of transducers for bidirectional decoding of prefix codes
2012
In a previous paper [L. Giambruno and S. Mantaci, Theoret. Comput. Sci. 411 (2010) 1785–1792] a bideterministic transducer is defined for the bidirectional deciphering of words by the method introduced by Girod [ IEEE Commun. Lett. 3 (1999) 245–247]. Such a method is defined using prefix codes. Moreover a coding method, inspired by the Girod’s one, is introduced, and a transducer that allows both right-to-left and left-to-right decoding by this method is defined. It is proved also that this transducer is minimal. Here we consider the number of states of such a transducer, related to some features of the considered prefix code X . We find some bounds of such a number of states in relation wi…
Loop-free Gray code algorithm for the e-restricted growth functions
2011
The subject of Gray codes algorithms for the set partitions of {1,2,...,n} had been covered in several works. The first Gray code for that set was introduced by Knuth (1975) [5], later, Ruskey presented a modified version of [email protected]?s algorithm with distance two, Ehrlich (1973) [3] introduced a loop-free algorithm for the set of partitions of {1,2,...,n}, Ruskey and Savage (1994) [9] generalized [email protected]?s results and give two Gray codes for the set of partitions of {1,2,...,n}, and recently, Mansour et al. (2008) [7] gave another Gray code and loop-free generating algorithm for that set by adopting plane tree techniques. In this paper, we introduce the set of e-restricte…
A Generalization of Girod’s Bidirectional Decoding Method to Codes with a Finite Deciphering Delay
2012
In this paper we generalize an encoding method due to Girod (cf. [6]) using prefix codes, that allows a bidirectional decoding of the encoded messages. In particular we generalize it to any finite alphabet A, to any operation defined on A, to any code with finite deciphering delay and to any key x ∈ A+ , on a length depending on the deciphering delay. We moreover define, as in [4], a deterministic transducer for such generalized method. We prove that, fixed a code X ∈ A* with finite deciphering delay and a key x ∈ A *, the transducers associated to different operations are isomorphic as unlabelled graphs. We also prove that, for a fixed code X with finite deciphering delay, transducers asso…
DEFECT THEOREMS FOR TREES
2000
We generalize different notions of a rank of a set of words to sets of trees. We prove that almost all of those ranks can be used to formulate a defect theorem. However, as we show, the prefix rank forms an exception.
On the Number of Closed Factors in a Word
2015
A closed word (a.k.a. periodic-like word or complete first return) is a word whose longest border does not have internal occurrences, or, equivalently, whose longest repeated prefix is not right special. We investigate the structure of closed factors of words. We show that a word of length $n$ contains at least $n+1$ distinct closed factors, and characterize those words having exactly $n+1$ closed factors. Furthermore, we show that a word of length $n$ can contain $\Theta(n^{2})$ many distinct closed factors.
Lightweight LCP construction for very large collections of strings
2016
The longest common prefix array is a very advantageous data structure that, combined with the suffix array and the Burrows-Wheeler transform, allows to efficiently compute some combinatorial properties of a string useful in several applications, especially in biological contexts. Nowadays, the input data for many problems are big collections of strings, for instance the data coming from "next-generation" DNA sequencing (NGS) technologies. In this paper we present the first lightweight algorithm (called extLCP) for the simultaneous computation of the longest common prefix array and the Burrows-Wheeler transform of a very large collection of strings having any length. The computation is reali…