Search results for "profiling"

showing 10 items of 881 documents

Analysis of the Molecular Dialogue Between Gray Mold (Botrytis cinerea) and Grapevine (Vitis vinifera) Reveals a Clear Shift in Defense Mechanisms Du…

2015

Mature grapevine berries at the harvesting stage (MB) are very susceptible to the gray mold fungus Botrytis cinerea, while veraison berries (VB) are not. We conducted simultaneous microscopic and transcriptomic analyses of the pathogen and the host to investigate the infection process developed by B. cinerea on MB versus VB, and the plant defense mechanisms deployed to stop the fungus spreading. On the pathogen side, our genome-wide transcriptomic data revealed that B. cinerea genes upregulated during infection of MB are enriched in functional categories related to necrotrophy, such as degradation of the plant cell wall, proteolysis, membrane transport, reactive oxygen species (ROS) genera…

Physiology[SDV]Life Sciences [q-bio]Defence mechanismsVeraisonCell WallGene Expression Regulation PlantGene Expression Regulation FungalStilbenesPlant defense against herbivoryVitisPathogenComputingMilieux_MISCELLANEOUSDisease ResistanceOligonucleotide Array Sequence AnalysisBotrytis cinerea2. Zero hungerchemistry.chemical_classificationVirulencebiologyReverse Transcriptase Polymerase Chain ReactionPhytoalexinGene Expression Regulation Developmentalfood and beveragesGeneral MedicineSalicylatesPlant disease[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyHost-Pathogen Interactions[SDE]Environmental SciencesBotrytisSesquiterpenesPlant DiseaseVirulenceCyclopentanesMicrobiologyPhytoalexinsBotany[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyOxylipinsPlant DiseasesPhytopathologyGene Expression Profilingfungibiology.organism_classificationGene OntologychemistryResveratrolFruitReactive Oxygen SpeciesAgronomy and Crop Science[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Identification of Volatile Compounds in Blackcurrant Berries: Differences Among Cultivars

2021

Berries of blackcurrant are known to produce a strong flavor. Some previous studies have reported that a given cultivar of blackcurrant can produce berries with a specific profile of volatile compounds. For the Burgundy region in France, the Noir de Bourgogne cultivar is especially important because it is the main ingredient of a liquor with a designation of origin. The aim of the present study was to characterize the volatile fractions of berries from 15 cultivars in order to explore the possibility of using different cultivars for liquor production. The plants were cultivated under the same conditions and harvested in the same year. The volatile fractions of the harvested berries were ana…

PhytochemicalsSPMEPharmaceutical ScienceBiology01 natural sciencesGas Chromatography-Mass SpectrometryArticleAnalytical ChemistryOcimene010104 statistics & probabilitychemistry.chemical_compoundIngredientblackcurrant berriesRibesQD241-4410404 agricultural biotechnologySpecies SpecificityDrug DiscoverycultivarsHumans[CHIM]Chemical SciencesStatistical analysisCultivarvolatile compounds0101 mathematicsPhysical and Theoretical ChemistrySolid Phase MicroextractionFlavorVolatile Organic CompoundsLimonenemultivariate statistical analysesAlcoholic BeveragesOrganic Chemistry04 agricultural and veterinary sciences040401 food scienceCrop Productionchemical profilingFlavoring AgentsHorticulturechemistryChemistry (miscellaneous)FruitTasteMultivariate AnalysisMolecular MedicineFranceGas chromatography–mass spectrometryGC-MSMolecules
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Spatial transcriptome of a germinal center plasmablastic burst hints at MYD88/CD79B mutants-enriched diffuse large B-cell lymphomas

2022

The GC reaction results in the selection of B cells acquiring effector Ig secreting ability by progressing toward plasmablastic differentiation. This transition is associated with exclusion from the GC microenvironment. The aberrant expansion of plasmablastic elements within the GC fringes configures an atypical condition, the biological characteristics of which have not been defined yet. We investigated the in situ immunophenotypical and transcriptional characteristics of a nonclonal germinotropic expansion of plasmablastic elements (GEx) occurring in the tonsil of a young patient. Compared to neighboring GC and perifollicular regions, the GEx showed a distinctive signature featuring key r…

Plasma CellsImmunologyGerminal centerDiffuse large B-cell lymphomaDigital spatial profilingSettore MED/08 - Anatomia PatologicaPlasmablastDiffuse large B-cell lymphoma; Digital spatial profiling; Germinal center; Plasmablastdigital spatial profiling; germinal center; plasmablast; diffuse large b-cell lymphomaMyeloid Differentiation Factor 88Tumor MicroenvironmentHumansSettore MED/05 - Patologia ClinicaImmunology and AllergyLymphoma Large B-Cell DiffuseTranscriptomeCD79 AntigensDiffuse large B-cell lymphoma ⋅ Digital spatial profiling ⋅ Germinal center ⋅ Plasmablast
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Polycomb-like 2 Associates with PRC2 and Regulates Transcriptional Networks during Mouse Embryonic Stem Cell Self-Renewal and Differentiation

2010

SummaryPolycomb group (PcG) proteins are conserved epigenetic transcriptional repressors that control numerous developmental gene expression programs and have recently been implicated in modulating embryonic stem cell (ESC) fate. We identified the PcG protein PCL2 (polycomb-like 2) in a genome-wide screen for regulators of self-renewal and pluripotency and predicted that it would play an important role in mouse ESC-fate determination. Using multiple biochemical strategies, we provide evidence that PCL2 is a Polycomb Repressive Complex 2 (PRC2)-associated protein in mouse ESCs. Knockdown of Pcl2 in ESCs resulted in heightened self-renewal characteristics, defects in differentiation, and alte…

Pluripotent Stem CellsCellular differentiationGene regulatory networkDown-RegulationPolycomb-Group Proteinsmacromolecular substancesMethylationBiochemistryArticleCell LineHistonesSelf-RenewalMice03 medical and health sciences0302 clinical medicineEmbryonic Stem CellHistone methylationPolycomb-group proteinsGeneticsAnimalsGene Regulatory NetworksEpigeneticsInduced pluripotent stem cellEmbryonic Stem Cells030304 developmental biologyGenetics0303 health sciencesbiologyurogenital systemGene Expression ProfilingPolycomb Repressive Complex 2Cell DifferentiationCell BiologyCellular ReprogrammingSTEMCELLPRC2Embryonic stem cellRepressor ProteinsOncologyDifferentiation030220 oncology & carcinogenesisembryonic structuresbiology.proteinMolecular MedicineTranscriptional NetworkPRC2Genome-Wide Association StudyProtein BindingCell Stem Cell
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Method for Estimating the Manual Nesting Process Efficiency for Profiling Machines, Based upon Image Processing Techniques

2015

The paper presents a method for estimating the efficiency of the manual nesting process. By using the graphic file generated during the nesting process and using image processing techniques, the method allows the user to calculate the percentage of material used for manufacturing the parts. The method combines a manual approach - the user has to select some specific points on the graphic file with the mouse, with some image processing algorithms form Matlab software package.

Profiling (computer programming)Computer scienceDigital image processingNesting (process)Image processingGeneral MedicineData miningMATLABcomputer.software_genrecomputercomputer.programming_languageApplied Mechanics and Materials
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Researches Regarding Optimising the Contouring Precision of CNC Laser Cutting Machines

2014

This paper presents some experimental researches regarding the manufacturing accuracy of a profiling machine together with an approach to eliminate the positioning and contouring errors. A mathematical model based on transfer functions is used as starting approach in order to tune the feed drives of the machine. The accuracy of the profiling machine is tested before and after the tuning process, in order to validate the proposed approach. There are unfolded both positioning tests along one axis and contouring tests on two axes.

Profiling (computer programming)Engineering drawingContouringEngineeringLaser cuttingbusiness.industryProcess (computing)Control engineeringGeneral MedicineMotion controlbusinessTransfer functionApplied Mechanics and Materials
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Improving the Manufacturing Accuracy of the Profiling Machines

2010

Abstract This paper presents the results of theoretical and experimental researches carried out with regard to the optimization of the dynamic behavior of a CNC laser cutting machine, in terms of cutting precision, for the case of flat metallic parts whose contours comprise right angles and which a profiling machine has to process continuously, without stopping in the corner points. It is aimed especially at detailing the influence of the numerical control equipment's setup on the size of the contouring errors and on the smoothness of the movement, factors that have a direct influence on the accuracy and that have been less addressed until now. The theoretical researches indicate that it is…

Profiling (computer programming)EngineeringContouringSmoothnessControl theorybusiness.industryLaser cuttingNumerical controlProcess (computing)Right angleMechanical engineeringbusinessSimulationIFAC Proceedings Volumes
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Method for improving the contouring accuracy for CNC profiling machines at the shop floor level

2009

Computer Numerically Controlled (CNC) laser cutting machines are capable of producing high-quality precise parts. However, as cutting speeds is increased, in order to achieve higher productivity, the accuracy of the parts is affected. In order to improve the contouring accuracy of these machines, a simple straight-forward joint simulation and experimental strategy is proposed. The position controllers within the feed drives are considered the key factor in improving the dynamic behavior and consequently the contouring accuracy of a CNC laser cutting machine at the shop floor level.

Profiling (computer programming)EngineeringContouringbusiness.product_categoryLaser cuttingbusiness.industryFloor levelControl engineeringServomotorAutomotive engineeringMachine toolControl systemNumerical controlbusiness2009 7th IEEE International Conference on Industrial Informatics
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Run-time profiling of functional logic programs

2005

In this work, we introduce a profiling scheme for modern functional logic languages covering notions like laziness, sharing, and non-determinism. Firstly, we instrument a natural (big-step) semantics in order to associate a symbolic cost to each basic operation (e.g., variable updates, function unfoldings, case evaluations). While this cost semantics provides a formal basis to analyze the cost of a computation, the implementation of a cost-augmented interpreter based on it would introduce a huge overhead. Therefore, we also introduce a sound transformation that instruments a program such that its execution—under the standard semantics—yields not only the corresponding results but also the a…

Profiling (computer programming)Functional programmingTheoretical computer sciencebusiness.industryComputer scienceSubroutineComputationSoftware developmentProgram transformationcomputer.software_genreSemanticsSemantics of logicLogical programmingbusinesscomputerInterpreter
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Defect incorporation in In-containing layers and quantum wells: Experimental analysis via deep level profiling and optical spectroscopy

2020

Abstract Recent studies demonstrated that the performance of InGaN/GaN quantum well (QW) light emitting diodes (LEDs) can be significantly improved through the insertion of an InGaN underlayer (UL). The current working hypothesis is that the presence of the UL reduces the density of non-radiative recombination centers (NRCs) in the QW itself: during the growth of the UL, surface defects are effectively buried in the UL, without propagating towards the QW region. Despite the importance of this hypothesis, the concentration profile of defects in the quantum wells of LEDs with and without the UL was never investigated in detail. This paper uses combined capacitance-voltage and steady-state pho…

Profiling (computer programming)Materials scienceAcoustics and UltrasonicsDeep levelInGaNbusiness.industryunderlayerSSPC measurementsCondensed Matter PhysicsSettore ING-INF/01 - ElettronicaSurfaces Coatings and FilmsElectronic Optical and Magnetic Materialsdefects growthefficiencyOptoelectronicsSpectroscopybusinessdefects growth; InGaN; SSPC measurements; underlayerperformanceQuantum well
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