Search results for "quantum theory"

showing 10 items of 234 documents

Matrix Isolation and Ab Initio Study of Trans−Trans and Trans−Cis Dimers of Formic Acid

2010

Six trans-trans and five trans-cis dimeric structures of formic acid (HCOOH) are revealed by ab initio calculations. Four trans-trans and two trans-cis dimers are identified in the IR absorption spectra in argon matrices. The trans-cis dimers are obtained by narrow-band IR excitation of the vibrational transitions of the trans-trans dimers. Two trans-trans (tt3 and tt6) and one trans-cis (tc4) dimer are characterized experimentally for the first time. The tunneling decay rates of two trans-cis dimers (tc1 and tc4) are evaluated at different temperatures. A greater lifetime of the trans-cis dimers at elevated temperatures compared to the cis-monomer suggests that the high-energy conformers c…

Models MolecularFormatesSpectrophotometry InfraredFormic acidDimerMolecular ConformationAb initio010402 general chemistryPhotochemistry01 natural scienceschemistry.chemical_compoundAb initio quantum chemistry methods0103 physical sciencesPhysical and Theoretical ChemistryConformational isomerism010304 chemical physicsHydrogen bondMatrix isolationStereoisomerism0104 chemical sciences3. Good healthCrystallographychemistryQuantum TheoryThermodynamicsDimerizationCis–trans isomerismThe Journal of Physical Chemistry A
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Computational and experimental studies of size and shape related physical properties of hydroxyapatite nanoparticles

2011

In this work, the properties of hydroxyapatite (HAP) nanoparticles (NPs) have been studied both theoretically and experimentally focusing on computational analysis. HAP is widely used to fabricate implants, for drug delivery, etc. The physical properties of the nanosized HAP particles play an important role in the interaction with cells in the human body and are of great interest. Computer simulation was employed to understand the properties of HAP clusters (Ca(5)(PO(4))(3)OH) including formation energies, dipole moments and polarization (surface charges) by molecular mechanics (MM + , OPLS) and mostly by quantum semi-empirical Hartree-Fock (PM3) methods. The size of the simulated cluster i…

Models MolecularHydrogenMolecular Conformationchemistry.chemical_elementNanoparticleElectrons02 engineering and technologyElectron010402 general chemistry01 natural sciencesMolecular physicsPhysical PhenomenaCluster (physics)Computer SimulationGeneral Materials ScienceWork functionSurface chargeParticle SizeChemistryHydrogen bond021001 nanoscience & nanotechnologyCondensed Matter Physics0104 chemical sciencesCrystallographyDipoleDurapatiteNanoparticlesQuantum Theory0210 nano-technologyJournal of Physics: Condensed Matter
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On the Catalytic Effect of Water in the Intramolecular Diels–Alder Reaction of Quinone Systems: A Theoretical Study

2012

The mechanism of the intramolecular Diels#8211;Alder (IMDA) reaction of benzoquinone 1, in the absence and in the presence of three water molecules, 1w, has been studied by means of density functional theory (DFT) methods, using the M05-2X and B3LYP functionals for exploration of the potential energy surface (PES). The energy and geometrical results obtained are complemented with a population analysis using the NBO method, and an analysis based on the global, local and group electrophilicity and nucleophilicity indices. Both implicit and explicit solvation emphasize the increase of the polarity of the reaction and the reduction of activation free energies associated with the transition stat…

Models MolecularImplicit solvationPopulationpolar Diels–Alder reactionsMolecular ConformationPharmaceutical SciencePhotochemistryArticleCatalysisAnalytical Chemistrylcsh:QD241-441lcsh:Organic chemistryComputational chemistryDrug DiscoveryDFT reactivity indicesComputer SimulationPhysical and Theoretical ChemistryeducationDiels–Alder reactioneducation.field_of_studyCycloaddition ReactionChemistryOrganic Chemistryintramolecular Diels–Alder reactionsSolvationQuinonesWaterHydrogen Bondingwater catalysisBenzoquinoneTransition stateModels ChemicalChemistry (miscellaneous)Intramolecular forceMolecular MedicineQuantum TheoryThermodynamicsDensity functional theorylocal reactivity difference indexDiterpenesAlgorithmsMolecules
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Stereochemical Consequences of Oxygen Atom Transfer and Electron Transfer in Imido/Oxido Molybdenum(IV, V, VI) Complexes with Two Unsymmetric Bidenta…

2012

Two equivalents of the unsymmetrical Schiff base ligand (L(tBu))(-) (4-tert-butyl phenyl(pyrrolato-2-ylmethylene)amine) and MoCl(2)(NtBu)O(dme) (dme = 1,2-dimethoxyethane) gave a single stereoisomer of a mixed imido/oxido Mo(VI) complex 2(tBu). The stereochemistry of 2(tBu) was elucidated using X-ray diffraction, NMR spectroscopy, and DFT calculations. The complex is active in an oxygen atom transfer (OAT) reaction to trimethyl phosphane. The putative intermediate five-coordinate Mo(IV) imido complex coordinates a PMe(3) ligand, giving the six-coordinate imido phosphane Mo(IV) complex 5(tBu). The stereochemistry of 5(tBu) is different from that of 2(tBu) as shown by NMR spectroscopy, DFT ca…

Models MolecularMagnetic Resonance SpectroscopyDenticityCoordination sphereElectronsCrystallography X-RayLigandsPhotochemistryMedicinal chemistrylaw.inventionElectron TransportInorganic Chemistrychemistry.chemical_compoundElectron transferCoordination ComplexeslawMoleculeFerrous CompoundsPhysical and Theoretical ChemistryElectron paramagnetic resonanceSchiff BasesMolybdenumSchiff baseMolecular StructureLigandStereoisomerismNuclear magnetic resonance spectroscopyOxygenEthyl EtherschemistryQuantum TheoryOxidation-ReductionInorganic Chemistry
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On novel magnetic probe for fullerene characterization: Theoretical studies on NMR parameters of free and confined in fullerenes HD and H2 molecules

2015

Chemical characterization and separation of individual fullerenes from a raw reaction mixture need new and efficient tools, including rapid spectroscopic techniques. Recent "molecular surgery" synthesis of endohedral complexes of fullerenes with selected atoms and small molecules has opened a new path for experimental and theoretical studies on structural and spectroscopic properties of these molecular systems. Among them are fullerenes with molecular hydrogen confined within a nanoscale cavity. In this work we report on quantum-chemical prediction of nuclear magnetic shielding (and chemical shift) and indirect spin-spin coupling constant in free HD and H2 molecules, as well as models of co…

Models MolecularMagnetic Resonance SpectroscopyFullereneHydrogenchemistry.chemical_element010402 general chemistry01 natural sciencesDFTComputational chemistryHD molecule0103 physical sciencesPhysics::Atomic and Molecular ClustersMaterials ChemistryMoleculeCCSD(T)Physical and Theoretical ChemistrySpectroscopyCoupling constant010304 chemical physicsfullereneBenzeneNuclear magnetic resonance spectroscopyComputer Graphics and Computer-Aided DesignSmall molecule0104 chemical sciencesCoupled clusterModels ChemicalchemistryChemical physicsconstansAnisotropyQuantum TheoryDensity functional theoryFullerenesindirect nuclear spin–spin couplingHydrogenJournal of Molecular Graphics and Modelling
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Triphenyltin(IV) 2-[(E)-2-(aryl)-1-diazenyl]benzoates as anticancer drugs: Synthesis, structural characterization, in vitro cytotoxicity and study of…

2009

Summary: Triphenyltin(IV) complexes of composition [Ph3SnL 1H]n (1) and [Ph3SnL2H]n (2) (where L1H=2-[(E)-2-(3-formyl-4-hydroxyphenyl)-1-diazenyl] benzoate and L2H = 2-[(E)-2-(4-Hydroxy-5-methylphenyl)-1-diazenyl] benzoate) were synthesized and characterized by spectroscopic (1H, 13C and 119Sn NMR, IR, 119Sn Mössbauer) techniques in combination with elemental analysis. The molecular structures and geometries of the complexes (1 and 2) were fully optimized using the quantum mechanical method (PM3). Complexes (1 and 2) were found to exhibit stronger cytotoxic activity in vitro across a panel of human tumour cell lines viz., A498, EVSA-T, H226, IGROV, M19 MEL, MCF-7 and WIDR. The test compound…

Models MolecularMagnetic Resonance SpectroscopySpectrophotometry InfraredStereochemistryTriphenyltin(IV) 2-[(E)-2-(4-Hydroxy-5-methylphenyl)-1-diazenyl]benzoateAntineoplastic AgentsCrystallography X-RayThymidylate synthaseAnti-cancer drugTriphenyltin(IV) benzoateCell Line TumorRibonucleotide ReductasesOrganotin CompoundsHumansPharmacology (medical)Pharmacologychemistry.chemical_classificationBinding SitesbiologyCell DeathChemistryTopoisomeraseThymidylate SynthaseIn vitroBenzoatesRibonucleotide reductaseEnzymeOncologyDocking (molecular)Cell cultureSettore CHIM/03 - Chimica Generale E InorganicaDocking studiebiology.proteinQuantum TheoryThermodynamicsTriphenyltin(IV) 2-[(E)-2-(3-formyl-4-hydroxyphenyl)-1-diazenyl]benzoateDrug Screening Assays AntitumorCell line
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Heptacoordinated Molybdenum(VI) Complexes of Phenylenediamine Bis(phenolate): A Stable Molybdenum Amidophenoxide Radical

2013

The syntheses, crystallographic structures, magnetic properties, and theoretical studies of two heptacoordinated molybdenum complexes with N,N′-bis(3,5-di-tert-butyl-2-hydroxyphenyl)-1,2-phenylenediamine (H4N2O2) are reported. A formally molybdenum(VI) complex [Mo(N2O2)Cl2(dmf)] (1) was synthesized by the reaction between [MoO2Cl2(dmf)2] and H4N2O2, whereas the other molybdenum(VI) complex [Mo(N2O2)(HN2O2)] (2) was formed when [MoO2(acac)2] was used as a molybdenum source. Both complexes represent a rare case of the MoVI ion without any multiply bonded terminal ligands. In addition, molecular structures, magnetic measurements, ESR spectroscopy, and density functional theory calculations ind…

Models MolecularMagnetic measurementsFree Radicalssyylliset liganditInorganic chemistryMolecular Conformationchemistry.chemical_elementPhenylenediaminesCrystallography X-RayMolecular conformationIonInorganic ChemistryPhenolsRare casePolymer chemistryOrganometallic CompoundsamidophenoxidePhysical and Theoretical ChemistrySpectroscopyta116Molybdenumradicalta114X-raynon-innocent ligandschemistryMolybdenumradikaalitQuantum TheoryDensity functional theoryamidofenoksidimolybdeeni
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DFT study of zigzag (n, 0) single-walled carbon nanotubes: 13C NMR chemical shifts

2016

Abstract 13 C NMR chemical shifts of selected finite-size models of pristine zigzag single walled carbon nanotubes (SWCNTs) with a diameter of ∼0.4–0.8 nm and length up to 2.2 nm were studied theoretically. Results for finite SWCNTs models containing 1, 4 and 10 adjacent bamboo-type units were compared with data obtained for infinite tubes in order to estimate the reliability of small finite models in predicting magnetic properties of real-size nanotubes and to assess their tube-length dependence. SWCNTs were fully optimized using unrestricted density functional theory (DFT-UB3LYP/6-31G*). Cyclacenes, as the shortest models of open-ended zigzag SWCNTs, with systematically varying diameter w…

Models MolecularMaterials science02 engineering and technologyCarbon nanotube010402 general chemistryDFT01 natural sciencesMolecular physicslaw.inventionlawComputational chemistryMaterials ChemistryCarbon-13 Magnetic Resonance SpectroscopyPhysical and Theoretical ChemistrySpectroscopyBasis setNanotubes Carbontheoretical modelingChemical shiftCarbon-13Carbon-13 NMR021001 nanoscience & nanotechnologyzigzag SWCNTComputer Graphics and Computer-Aided DesignNMR0104 chemical sciencesReal sizeZigzagQuantum TheorycyclacenesDensity functional theory0210 nano-technologyJournal of Molecular Graphics and Modelling
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Conformational and structural studies of N-methylacetohydroxamic acid and of its mono- and bis-chelated uranium(VI) complexes

2015

The thermodynamics and kinetics of the cis/trans isomerism of N-methylacetohydroxamic acid (NMAH) and its conjugated base (NMA(-)) have been reinvestigated in aqueous media by (1)H NMR spectroscopy. Hindered rotation around the central C-N bond due to electronic delocalization becomes slow enough on the NMR time scale to observe both rotamers in equilibrium in D2O at room temperature. By properly assigning the methyl group resonances, evidence for the prevalence of the E over the Z form is unambiguously provided [K300=[E]/[Z]=2.86(2) and 9.63(5) for NMAH and NMA(-), respectively], closing thereby a long-lasting dispute about the most stable conformer. To that end, calculations of the chemic…

Models MolecularMolecular ConformationX-ray crystal structuresCrystallography X-RayHydroxamic AcidsSpectrum Analysis RamanBiochemistryInorganic Chemistrychemistry.chemical_compoundDelocalized electronReaction rate constantEXSY spectroscopyCoordination ComplexesSpectroscopyConformational isomerismChelating AgentsUranium(VI) complexesChemical shiftWater[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryCrystallographyHydroxamic acidchemistry[ CHIM.THEO ] Chemical Sciences/Theoretical and/or physical chemistryRaman spectroscopyProton NMRQuantum TheoryUraniumDensity functional theoryMethyl group
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Effects of sequence, connectivity, and counter ions in new amide-linked Ru(tpy)2-Re(bpy) chromophores on redox chemistry and photophysics.

2013

New cationic metallo ligands L1-L3 based on bis(terpyridine) ruthenium(II) complexes decorated with differently substituted 2,2'-bipyridines attached via amide groups (5-NHCO-bpy, 4-CONH-bpy, 5-CONH-bpy) were prepared. Coordination of Re(I)Cl(CO)(3) fragments to the bpy unit gives the corresponding bimetallic Ru~Re complexes 1-3. Hydrogen bonds of the bridging amide groups to [PF(6)](-) counterions or to water molecules are observed both in the solid state and in solution. The impact of the amide orientation, the connecting site, and the coordination of counterions on redox and photophysical properties is explored. Both the metallo ligands L1-L3 and the bimetallic complexes 1-3 are emissive…

Models MolecularMolecular Conformationchemistry.chemical_elementPhotochemistryCrystallography X-RayRutheniumlaw.inventionInorganic Chemistrychemistry.chemical_compoundlawAmideOrganometallic CompoundsMoleculePhysical and Theoretical ChemistryElectron paramagnetic resonanceBimetallic stripIonsHydrogen bondLigandPhotochemical ProcessesAmidesRutheniumCrystallographyRheniumchemistryQuantum TheoryTerpyridineOxidation-ReductionInorganic chemistry
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