Search results for "regulation"

showing 10 items of 4463 documents

Paclitaxel and beta-lapachone synergistically induce apoptosis in human retinoblastoma Y79 cells by downregulating the levels of phospho-Akt.

2009

Paclitaxel (PTX) and beta-lapachone (LPC) are naturally occurring compounds that have shown a large spectrum of anticancer activity. In this article we show for the first time that PTX/LPC combination induces potent synergistic apoptotic effects in human retinoblastoma Y79 cells. Combination of suboptimal doses of PTX (0.3 nM) and LPC (1.5 microM) caused biochemical and morphological signs of apoptosis at 48 h of treatment. These effects were accompanied by potent lowering in inhibitor of apoptosis proteins and by activation of Bid and caspases 3 and 6 with lamin B and PARP breakdown. PTX/LPC combination acted by favoring p53 stabilization through a lowering in p-Akt levels and in ps166-MDM…

Time FactorsPhysiologyClinical BiochemistryApoptosisInhibitor of Apoptosis ProteinsWortmanninchemistry.chemical_compoundSettore BIO/10 - BiochimicaAntineoplastic Combined Chemotherapy ProtocolsPhosphorylationCaspasebiologyCaspase 6Lamin Type BCaspase 3Protein StabilityRetinoblastomaDrug SynergismProto-Oncogene Proteins c-mdm2TransfectionBiochemistrylipids (amino acids peptides and proteins)Poly(ADP-ribose) PolymerasesWortmanninBH3 Interacting Domain Death Agonist Proteinretinoblastoma survival factors apoptosisPaclitaxelCell SurvivalPoly ADP ribose polymeraseActive Transport Cell NucleusDown-RegulationInhibitor of apoptosisTransfectionCell Line TumorHumansProtein kinase BProtein Kinase InhibitorsCell NucleusDose-Response Relationship DrugCell BiologyAntineoplastic Agents PhytogenicAndrostadieneschemistryCell cultureApoptosisbiology.proteinCancer researchTumor Suppressor Protein p53Proto-Oncogene Proteins c-aktNaphthoquinonesJournal of cellular physiology
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Cross-circulation and Cell Distribution Kinetics in Parabiotic Mice

2011

Blood-borne nucleated cells participate not only in inflammation, but in tissue repair and regeneration. Because progenitor and stem cell populations have a low concentration in the blood, the circulation kinetics and tissue distribution of these cells is largely unknown. An important approach to tracking cell lineage is the use of fluorescent tracers and parabiotic models of cross-circulation. Here, we investigated the cross-circulation and cell distribution kinetics of C57/B6 GFP(+)/wild-type parabionts. Flow cytometry analysis of the peripheral blood after parabiosis demonstrated no evidence for a "parabiotic barrier" based on cell size or surface characterstics; all peripheral blood cel…

Time FactorsPhysiologyParabiosisT-LymphocytesClinical BiochemistryGreen Fluorescent ProteinsParabiosisMice TransgenicBiologyArticleFlow cytometryMiceNucleated cellWeight LossmedicineAnimalsPeripheral blood cellWhole bloodmedicine.diagnostic_testBehavior AnimalCell BiologyMolecular biologyMice Inbred C57BLLymphatic systemGene Expression RegulationImmunologyLymphStem cell
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Glucocorticoid receptor regulates organic cation transporter 1 (OCT1, SLC22A1) expression via HNF4α upregulation in primary human hepatocytes

2013

Abstract Background Organic cation transporter 1 (OCT1, SLC22A1) is a membrane transporter that is important for therapeutic effect of the antidiabetic drug metformin. Its liver-specific expression in hepatocytes is strongly controlled by hepatocyte nuclear factor-4α (HNF4α). HNF4α expression and transcriptional activity have been demonstrated to be augmented by glucocorticoid receptor (GR) in human hepatocytes and rodent livers. Methods It was examined whether GR activation indirectly induces OCT1 gene expression via HNF4α up-regulation in primary human hepatocytes.We also examined which other transcription factors are involved in OCT1 gene expression and whether they are regulated by dexa…

Time FactorsPrimary Cell CultureTransfectionDexamethasoneReceptors GlucocorticoidGlucocorticoid receptorTransduction GeneticEnhancer bindingCoactivatorGene expressionHumansRNA MessengerGlucocorticoidsTranscription factorPharmacologyRegulation of gene expressionChemistryCCAAT-Enhancer-Binding Protein-betaOrganic Cation Transporter 1Hep G2 CellsGeneral MedicineTransfectionPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaMolecular biologyUp-RegulationHepatocyte Nuclear Factor 4Cell cultureHepatocytesTranscription FactorsPharmacological Reports
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High-throughput sequencing of RNA silencing-associated small RNAs in olive (Olea europaea L.).

2011

14 páginas, 5 figuras, 3 tablas, S4 figuras, S2 tablas

Time FactorsScienceMolecular Sequence DataSequence DatabasesPlant ScienceBiologyDeep sequencingTranscriptomesRNA interferenceGene Expression Regulation PlantGenome Analysis ToolsOleaGene expressionmicroRNAGenome DatabasesPlant GenomicsGene silencingGene Regulatory NetworksGenome SequencingBiologyConserved SequenceGeneticsPlant Growth and DevelopmentMultidisciplinaryPolymorphism GeneticBase SequenceReverse Transcriptase Polymerase Chain ReactionSequence Analysis RNAGene Expression ProfilingQRRNAGene Expression Regulation DevelopmentalHigh-Throughput Nucleotide SequencingReproducibility of ResultsGenomicsOlive treesFunctional GenomicsRNA silencingMicroRNAsRNA PlantSmall MoleculesMedicineRNA InterferenceResearch ArticleBiotechnologyDevelopmental BiologyPloS one
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Nucleosome-specific, Time-dependent Changes in Histone Modifications during Activation of the Early Growth Response 1 (Egr1) Gene

2014

Histone post-translational modifications and nucleosome remodeling are coordinate events involved in eukaryotic transcriptional regulation. There are relatively few data on the time course with which these events occur in individual nucleosomes. As a contribution to fill this gap, we first describe the nature and time course of structural changes in the nucleosomes -2, -1, and +1 of the murine Egr1 gene upon induction. To initiate the transient activation of the gene, we used the stimulation of MLP29 cells with phorbol esters and the in vivo activation after partial hepatectomy. In both models, nucleosomes -1 and +1 are partially evicted, whereas nucleosomes +1 and -2 slide downstream durin…

Time FactorsTranscription GeneticBiologyBiochemistryChromatin remodelingCell LineHistonesMiceHistone H1Histone methylationAnimalsHepatectomyHistone codeNucleosomeGene RegulationPromoter Regions GeneticMolecular BiologyEarly Growth Response Protein 1Mice KnockoutCell BiologyMolecular biologySWI/SNFLiver RegenerationNucleosomesCell biologyHistoneLiverChromatosomeHepatocytesbiology.proteinTetradecanoylphorbol AcetateProtein Processing Post-TranslationalJournal of Biological Chemistry
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Perturbation of spermine synthase Gene Expression and Transcript Profiling Provide New Insights on the Role of the Tetraamine Spermine in Arabidopsis…

2011

The role of the tetraamine spermine in plant defense against pathogens was investigated by using the Arabidopsis (Arabidopsis thaliana)-Pseudomonas viridiflava pathosystem. The effects of perturbations of plant spermine levels on susceptibility to bacterial infection were evaluated in transgenic plants (35S::spermine synthase [SPMS]) that overexpressed the SPMS gene and accumulated spermine, as well as in spms mutants with low spermine levels. The former exhibited higher resistance to P. viridiflava than wild-type plants, while the latter were more susceptible. Exogenous supply of spermine to wild-type plants also increased disease resistance. Increased resistance provided by spermine was p…

Time FactorsTranscription GeneticGene Expression ProfilingSpermine SynthaseArabidopsisColony Count MicrobialGenes PlantPlants Genetically ModifiedGene Expression Regulation EnzymologicGene Expression Regulation PlantPseudomonasMutationPlants Interacting with Other OrganismsSpermineRNA MessengerReactive Oxygen SpeciesOxidation-Reduction
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Coordinated Sumoylation and Ubiquitination Modulate EGF Induced EGR1 Expression and Stability

2011

Background Human early growth response-1 (EGR1) is a member of the zing-finger family of transcription factors induced by a range of molecular and environmental stimuli including epidermal growth factor (EGF). In a recently published paper we demonstrated that integrin/EGFR cross-talk was required for Egr1 expression through activation of the Erk1/2 and PI3K/Akt/Forkhead pathways. EGR1 activity and stability can be influenced by many different post-translational modifications such as acetylation, phosphorylation, ubiquitination and the recently discovered sumoylation. The aim of this work was to assess the influence of sumoylation on EGF induced Egr1 expression and/or stability. Methods We …

Time FactorsTranscription GeneticSUMO proteinlcsh:MedicineUbiquitin-conjugating enzymeBiochemistrychemistry.chemical_compoundEpidermal growth factorMG132protein 1lcsh:ScienceMitogen-Activated Protein Kinase 1Regulation of gene expressionMitogen-Activated Protein Kinase 3MultidisciplinaryProtein translationProtein Stabilitygene expression regulationCell biologyepidermal growth factorResearch Articlemedicine.drugProteasome Endopeptidase Complexendocrine systemkinase 1SUMO-1 ProteinBiologyDNA-binding proteinsGeneticsmedicineHumansBiologySettore BIO/10 - BIOCHIMICAProtein kinase BPI3K/AKT/mTOR pathwayEarly Growth Response Protein 1lcsh:RMitogen-activated proteinProteinsSumoylationRegulatory proteinsenzyme activationRNA stabilityMolecular biologychemistryProteolysisUbiquitin-Conjugating EnzymesProteasome inhibitorlcsh:QEarly growth responseGene expressionCell linePLoS ONE
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Comprehensive transcriptional analysis of the oxidative response in yeast

2008

The oxidative stress response in Saccharomyces cerevisiae has been analyzed by parallel determination of mRNA levels and transcription rates for the entire genome. A mathematical algorithm has been adapted for a dynamic situation such as the response to stress, to calculate theoretical mRNA decay rates from the experimental data. Yeast genes have been grouped into 25 clusters according to mRNA level and transcription rate kinetics, and average mRNA decay rates have been calculated for each cluster. In most of the genes, changes in one or both experimentally determined parameters occur during the stress response. 24% of the genes are transcriptionally induced without an increase inmRNAlevels…

Time FactorsTranscription GeneticSaccharomyces cerevisiaeResponse elementSaccharomyces cerevisiaeBiochemistryModels BiologicalEvolution MolecularFungal ProteinsTranscription (biology)Gene Expression Regulation FungalP-bodiesProtein biosynthesisCluster AnalysisRNA MessengerRRNA processingMolecular BiologyGeneMessenger RNAbiologyCell Biologybiology.organism_classificationMolecular biologyCell biologyOxygenKineticsOxidative StressModels ChemicalRNARibosomes
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Robust dynamical pattern formation from a multifunctional minimal genetic circuit.

2010

Abstract Background A practical problem during the analysis of natural networks is their complexity, thus the use of synthetic circuits would allow to unveil the natural mechanisms of operation. Autocatalytic gene regulatory networks play an important role in shaping the development of multicellular organisms, whereas oscillatory circuits are used to control gene expression under variable environments such as the light-dark cycle. Results We propose a new mechanism to generate developmental patterns and oscillations using a minimal number of genes. For this, we design a synthetic gene circuit with an antagonistic self-regulation to study the spatio-temporal control of protein expression. He…

Time FactorsTranscription GeneticSystems biologyGene regulatory networkPattern formationBiologyModels BiologicalCatalysis03 medical and health sciences0302 clinical medicineStructural BiologyModelling and SimulationOscillometryResearch articleEscherichia coliGene Regulatory Networkslcsh:QH301-705.5Molecular Biology030304 developmental biologyElectronic circuitGeneticsRegulation of gene expression0303 health sciencesModels StatisticalModels GeneticMechanism (biology)Applied MathematicsQuantitative Biology::Molecular NetworksGene Expression ProfilingSystems BiologyRobustness (evolution)DNAComputer Science ApplicationsQuorum sensinglcsh:Biology (General)Gene Expression RegulationModeling and SimulationBiological system030217 neurology & neurosurgeryBMC systems biology
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Oxidative stress responses and lipid peroxidation damage are induced during dehydration in the production of dry active wine yeasts.

2009

The tolerance of the yeast Saccharomyces cerevisiae to desiccation is important for the use of this microorganism in the wine industry, since active dry wine yeast is routinely used as starter for must fermentations. Many studies have shown the complexity of the cellular effects caused by water loss, including oxidative injuries on macromolecular components. However the technological interest of yeast drying was not addressed in those studies, and the dehydration conditions were far from the industrial practice. In the present study a molecular approach was used to characterize the relevant injuring conditions during pilot plant dehydrations under two different drying temperatures (i.e., 35…

Time FactorsWineSaccharomyces cerevisiaeBiologymedicine.disease_causeMicrobiologyLipid peroxidationchemistry.chemical_compoundIndustrial MicrobiologyGlutaredoxinGene Expression Regulation FungalmedicineBiomassDesiccationWinemakingWinefood and beveragesGeneral MedicineGlutathioneYeastYeast in winemakingOxidative StressBiochemistrychemistryFermentationLipid PeroxidationOxidation-ReductionOxidative stressFood ScienceInternational journal of food microbiology
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