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showing 10 items of 14059 documents

Founder effects drive the genetic structure of passively dispersed aquatic invertebrates

2018

Populations of passively dispersed organisms in continental aquatic habitats typically show high levels of neutral genetic differentiation, despite their high dispersal capabilities. Several evolutionary factors, including founder events and local adaptation, and life cycle features such as high population growth rates and the presence of propagule banks, have been proposed to be responsible for this paradox. Here, we have modeled the colonization process in these organisms to assess the impact of migration rate, growth rate, population size, local adaptation and life-cycle features on their population genetic structure. Our simulation results show that the strongest effect on population st…

0106 biological sciences0301 basic medicineLocal adaptationPopulationRotiferalcsh:MedicineBiologyFreshwater BiologyGenetic differentiation010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyZooplankton03 medical and health sciencesGeneticsPopulation growthAdaptació (Biologia)educationMigrationLocal adaptationeducation.field_of_studyEcologyEcologyGeneral NeurosciencePopulation sizelcsh:RSmall population sizeGeneral MedicineCladoceraEvolutionary StudiesGenetic hitchhiking030104 developmental biologyEvolutionary biologyGenetic structureBiological dispersalGeneral Agricultural and Biological SciencesInvertebrats d'aigua dolçaGenèticaPeerJ
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Genetic Component of Morphological Differentiation in Coal Tits Under Competitive Release

1987

0106 biological sciences0301 basic medicineMorphological differentiationbusiness.industryPopulation geneticsBiology010603 evolutionary biology01 natural sciences03 medical and health sciences030104 developmental biologyEvolutionary biologyComponent (UML)GeneticsCoalGene–environment interactionbusinessGeneral Agricultural and Biological SciencesEcology Evolution Behavior and SystematicsEvolution
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Patterns of genetic diversity and structure in Antarctic and sub-Antarctic Nacella (Patellogastropoda: Nacellidae) species.

2016

10 pages; International audience; The biogeography of the Southern Ocean reflects complex interactions between major macro-evolutionary forces and biotic elements. Major gateway openings, the establishment of the Antarctic Circumpolar Current and climate cooling are deeply connected to the composition, abundance and distribution of the Southern Ocean marine benthic fauna. Glacial episodes of the Quaternary heavily impacted the distribution of the genetic variation of the Southern Ocean biota. The genus Nacella includes 12 nominal species in different provinces of the Southern Ocean. In this study, we compared patterns of mitochondrial DNA diversity in three Nacella species from Antarctic Pe…

0106 biological sciences0301 basic medicineNacellaAntarctic Circumpolar CurrentNacellaBiogeographyFauna[SDV.BID]Life Sciences [q-bio]/Biodiversityphylogeography010603 evolutionary biology01 natural sciences03 medical and health sciencesPatellogastropoda14. Life underwaterGlacial periodSouthern OceanbiogeographyNature and Landscape Conservation[ SDV.BID ] Life Sciences [q-bio]/BiodiversityGlobal and Planetary ChangeGenetic diversity[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyEcologybiologyLast Glacial MaximumEcologyLast Glacial Maximumbiology.organism_classification030104 developmental biologyGenetic structure[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Following the Antarctic Circumpolar Current: patterns and processes in the biogeography of the limpet Nacella (Mollusca: Patellogastropoda) across th…

2017

14 pages; International audience; AimWe use an integrative biogeographical approach to further understand the evolution of an important Southern Ocean marine benthic element, the limpet genus Nacella (Mollusca: Patellogastropoda).LocationSouthern Ocean.MethodsWe used multi-locus time-calibrated phylogeny of Nacella at the scale of the whole Southern Ocean to elucidate the underlying processes involved in the origin and diversification of the genus.ResultsDivergence-time estimates suggest that soon after its origin during the mid-Miocene (c. 12.5 Ma), Nacella separated into two main lineages currently distributed in (1) South America and (2) Antarctica and the sub-Antarctic islands. We ident…

0106 biological sciences0301 basic medicineNacellalineage-through-time plotsPleistoceneAntarctic Circumpolar CurrentNacellaFaunaBiogeographylong-distance dispersal[SDV.BID]Life Sciences [q-bio]/Biodiversity010603 evolutionary biology01 natural sciences03 medical and health sciencesPatellogastropoda14. Life underwaterSouthern OceanEcology Evolution Behavior and Systematicsbiogeography[ SDV.BID ] Life Sciences [q-bio]/Biodiversity[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyEcologybiologyEcologyLimpetCircumpolar starbiology.organism_classification030104 developmental biologyBenthic zone[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Divergent parasite infections in sympatric cichlid species in Lake Victoria

2018

Parasitism has been proposed as a factor in host speciation, as an agent affecting coexistence of host species in species-rich communities and as a driver of post-speciation diversification. Young adaptive radiations of closely related host species of varying ecological and genomic differentiation provide interesting opportunities to explore interactions between patterns of parasitism, divergence and coexistence of sympatric host species. Here, we explored patterns in ectoparasitism in a community of 16 fully sympatric cichlid species at Makobe Island in Lake Victoria, a model system of vertebrate adaptive radiation. We asked whether host niche, host abundance or host genetic differentiatio…

0106 biological sciences0301 basic medicineParasitismZoologyparasitismiisäntälajitTanzania010603 evolutionary biology01 natural sciencesHost Specificity03 medical and health sciencesgenomic differentiationCichlidEctoparasitismAdaptive radiationAnimals14. Life underwaterincipient speciesEcosystemEcology Evolution Behavior and SystematicsbiologyHost (biology)PundamiliaCichlidsbiology.organism_classificationhost-parasite interactionsLakesSympatry030104 developmental biologyerilaistuminenSympatric speciationPundamilia pundamiliaperimäJanzen-Connell mechanismta1181lajiutuminenahvenkalatTrematodaadaptive radiationJournal of Evolutionary Biology
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Proposal of a Citrus translational genomic approach for early and infield detection of Flavescence dorée in Vitis

2014

Flavescence dore´e (FD) is one of the most widely known grapevine yellows disease and one of the most unabated worldwide in the viticulture sector. In this paper, we outline a strategy for developing an integrated system of technologies to enable rapid, early disease FD detection and diagnosis. We propose the deployment of a newly developed sensor device, the differential mobility spectrometer (DMS), which has shown positive results with a similar vector-borne disease in Citrus. We have previously demonstrated that the gas chromatograph DMS (GC/DMS) can distinguish various citrus diseases, and the system may also allow detection of volatile organic compound (VOC) signals from a tree of othe…

0106 biological sciences0301 basic medicinePlant ScienceComputational biologyBiology01 natural sciences03 medical and health sciencesSettore AGR/07 - Genetica AgrariaBotanyProfile analysisPlant systemEcology Evolution Behavior and SystematicsDifferential mobility spectrometer early detection Flavescence dore´e phytoplasma qRT-PCR ELISA VitisfungiEarly diseasefood and beveragesSettore AGR/12 - Patologia VegetaleGrapevine yellowsSettore AGR/02 - Agronomia E Coltivazioni ErbaceeSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboree030104 developmental biologySettore AGR/14 - PedologiaFlavescence doréeGas chromatographyGas chromatography–mass spectrometryDisease transmission010606 plant biology & botany
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Identification of conserved genes linked to responses to abiotic stresses in leaves among different plant species

2020

As a consequence of global climate change, certain stress factors that have a negative impact on crop productivity such as heat, cold, drought and salinity are becoming increasingly prevalent. We conducted a meta-analysis to identify genes conserved across plant species involved in (1) general abiotic stress conditions, and (2) specific and unique abiotic stress factors (drought, salinity, extreme temperature) in leaf tissues. We collected raw data and re-analysed eight RNA-Seq studies using our previously published bioinformatic pipeline. A total of 68 samples were analysed. Gene set enrichment analysis was performed using MapMan and PageMan whereas DAVID (Database for Annotation, Visuali…

0106 biological sciences0301 basic medicinePlant ScienceProtein degradationBiologyGenes Plant01 natural sciences03 medical and health scienceschemistry.chemical_compoundGene Expression Regulation PlantStress PhysiologicalSettore AGR/07 - Genetica AgrariaMYBSecondary metabolismAbscisic acidGeneAbiotic componentGeneticsabiotic-stresses differentially expressed genes leaves meta-analysis RNA-Seq transcriptomic.Abiotic stressGene Expression Profilingfungifood and beveragesPlant LeavesSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboree030104 developmental biologychemistryCinnamoyl-CoA reductaseAgronomy and Crop Science010606 plant biology & botany
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Genetic structuring in Atlantic haddock contrasts with current management regimes

2020

AbstractThe advent of novel genetic methods has made it possible to investigate population structure and connectivity in mobile marine fish species: knowledge of which is essential to ensure a sustainable fishery. Haddock (Melanogrammus aeglefinus) is a highly exploited marine teleost distributed along the coast and continental shelf on both sides of the North Atlantic Ocean. However, little is known about its population structure. Here, we present the first study using single-nucleotide polymorphism (SNP) markers to assess the genetic population structure of haddock at multiple geographic scales, from the trans-Atlantic to the local (fjord) level. Genotyping 138 SNP loci in 1329 individual…

0106 biological sciences0301 basic medicinePopulation geneticsAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesStructuringGenetic population structure of fish in the North AtlanticFiskeriforvaltningGenetic diversity03 medical and health sciencesVDP::Genetikk og genomikk: 474Fisheries ManagementGenetisk populasjonsstruktur hos fisk i NordatlanterenEcology Evolution Behavior and SystematicsEcologybiologyHaddockbiology.organism_classificationFishery030104 developmental biologyGeographyCurrent managementHyseGenetisk diversitetPopulasjonsgenetikkHaddock
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Molecular phylogeny and forms of photosynthesis in tribe Salsoleae (Chenopodiaceae).

2016

Evolution of C3–C4 intermediate and C4 lineages are resolved in Salsoleae (Chenopodiaceae), and a model for structural and biochemical changes for the evolution of the Salsoloid form of C4 is considered.

0106 biological sciences0301 basic medicineRecurrent evolutionPhysiologyBlotting WesternPlant ScienceChenopodiaceaewestern blotsPhotosynthesis01 natural sciences03 medical and health sciencesMicroscopy Electron TransmissionBotanyPhotosynthesisChenopodiaceaeCladePhylogenyCarbon IsotopesbiologyPhylogenetic treeC2 pathway15. Life on landCarbon Dioxidebiology.organism_classificationGlycine Dehydrogenase (Decarboxylating)CO2 compensation pointPhenotypePlant Leaves030104 developmental biologyCompensation pointC3–C4 intermediatesMolecular phylogeneticsTEMleaf anatomyAncestral character state reconstruction010606 plant biology & botanyResearch PaperJournal of experimental botany
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Aging parasites produce offspring with poor fitness prospects.

2017

Senescing individuals have poor survival prospects and low fecundity. They can also produce offspring with reduced survival and reproductive success. We tested the effect of parental age on the performance of descendants in the nematode Heligmosomoides polygyrus , an intestinal parasite of rodents. We found that offspring of senescing worms had reduced within-host survival and reduced egg shedding over the first month post-infection compared with offspring produced by young parents. These results suggest that declining offspring quality is a component of senescence in parasitic nematodes and might have evolutionary consequences for the optimal schedule of age-dependent investment into repr…

0106 biological sciences0301 basic medicineSenescence[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyTime FactorssenescenceOffspringLongevityIntestinal parasiteZoologyHeligmosomoides polygyrusBiologymedicine.disease_cause010603 evolutionary biology01 natural sciences03 medical and health sciencesMicemedicine[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimals[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyStrongylida InfectionsEvolutionary BiologyNematospiroides dubius[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologyoffspring fitnessReproductive successReproductionYoung parentsFecunditybiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)infection030104 developmental biologyNematodeFertilityImmunologyFemaleHeligmosomoides polygyrus[SDE.BE]Environmental Sciences/Biodiversity and EcologyGeneral Agricultural and Biological Sciencesparental age[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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