Search results for "research article"

showing 10 items of 4621 documents

Decoding Group Vocalizations: The Acoustic Energy Distribution of Chorus Howls Is Useful to Determine Wolf Reproduction

2016

Population monitoring is crucial for wildlife management and conservation. In the last few decades, wildlife researchers have increasingly applied bioacoustics tools to obtain information on several essential ecological parameters, such as distribution and abundance. One such application involves wolves (Canis lupus). These canids respond to simulated howls by emitting group vocalizations known as chorus howls. These responses to simulated howls reveal the presence of wolf litters during the breeding period and are therefore often used to determine the status of wolf populations. However, the acoustic structure of chorus howls is complex and discriminating the presence of pups in a chorus i…

0106 biological sciencesEntropyPopulation Dynamicslcsh:MedicineWildlife01 natural sciencesVocalizationMathematical and Statistical Techniqueslcsh:ScienceAnimal Signaling and CommunicationIberian wolfMammalseducation.field_of_studyMultidisciplinarybiologyAnimal BehaviorBehavior AnimalEcologyPhysicsReproductionAcoustic energyCanisPhysical SciencesVertebratesThermodynamicsCartographyStatistics (Mathematics)Research ArticleConservation of Natural ResourcesBioacousticsAnimal TypesPopulationResearch and Analysis Methods010603 evolutionary biologyCoyotesAcoustic SignalsAnimalsWildlife managementStatistical MethodseducationEcosystemBehaviorWolvesReproductive success010604 marine biology & hydrobiologylcsh:RChorusOrganismsBiology and Life SciencesAcousticsJackalsModels Theoreticalbiology.organism_classificationAmnioteslcsh:QVocalization AnimalZoologyBioacousticsMathematicsForecasting
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Applicability of a single‐use bioreactor compared to a glass bioreactor for the fermentation of filamentous fungi and evaluation of the reproducibili…

2021

Abstract The implementation of single‐use technologies offers several major advantages, e.g. prevention of cross‐contamination, especially when spore‐forming microorganisms are present. This study investigated the application of a single‐use bioreactor in batch fermentation of filamentous fungus Penicillium sp. (IBWF 040‐09) from the Institute of Biotechnology and Drug Research (IBWF), which is capable of intracellular production of a protease inhibitor against parasitic proteases as a secondary metabolite. Several modifications to the SU bioreactor were suggested in this study to allow the fermentation in which the fungus forms pellets. Simultaneously, fermentations in conventional glass b…

0106 biological sciencesEnvironmental Engineeringsingle‐use bioreactorMicroorganismPenicillium spBioengineeringSecondary metabolite01 natural sciencesprotease inhibitor03 medical and health sciences010608 biotechnologyPelletmedicineBioreactorFood sciencefermentationResearch Articles030304 developmental biology0303 health sciencesbiologyChemistrytechnology industry and agricultureSubstrate (chemistry)biology.organism_classificationequipment and suppliespelletsSingle-use bioreactorPenicilliumFermentationTP248.13-248.65Biotechnologymedicine.drugResearch ArticleEngineering in Life Sciences
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Simple learning rules to cope with changing environments

2008

10 pages; International audience; We consider an agent that must choose repeatedly among several actions. Each action has a certain probability of giving the agent an energy reward, and costs may be associated with switching between actions. The agent does not know which action has the highest reward probability, and the probabilities change randomly over time. We study two learning rules that have been widely used to model decision-making processes in animals-one deterministic and the other stochastic. In particular, we examine the influence of the rules' 'learning rate' on the agent's energy gain. We compare the performance of each rule with the best performance attainable when the agent …

0106 biological sciencesError-driven learningExploitComputer scienceEnergy (esotericism)Biomedical EngineeringBiophysicsBioengineeringanimal behavior010603 evolutionary biology01 natural sciencesBiochemistryMulti-armed banditModels Biologicaldecision makingBiomaterials03 medical and health sciences[ INFO.INFO-BI ] Computer Science [cs]/Bioinformatics [q-bio.QM][ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsLearningComputer Simulation[ SDV.BIBS ] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]multi-armed banditEcosystem030304 developmental biologySimple (philosophy)0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologybusiness.industrydynamic environmentslearning rulesdecision-making[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]Unlimited periodRange (mathematics)Action (philosophy)Artificial intelligence[SDE.BE]Environmental Sciences/Biodiversity and Ecology[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]businessBiotechnologyResearch Article[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Modularity as a source of new morphological variation in the mandible of hybrid mice.

2012

Abstract Background Hybridization is often seen as a process dampening phenotypic differences accumulated between diverging evolutionary units. For a complex trait comprising several relatively independent modules, hybridization may however simply generate new phenotypes, by combining into a new mosaic modules inherited from each parental groups and parts intermediate with respect to the parental groups. We tested this hypothesis by studying mandible size and shape in a set of first and second generation hybrids resulting from inbred wild-derived laboratory strains documenting two subspecies of house mice, Musmusculus domesticus and Musmusculus musculus. Phenotypic variation of the mandible…

0106 biological sciencesEvolutionMandible[SDV.BID]Life Sciences [q-bio]/BiodiversityModels Biological010603 evolutionary biology01 natural sciencesHouse mouse[ SDV.BDD.MOR ] Life Sciences [q-bio]/Development Biology/MorphogenesisMandible (arthropod mouthpart)Mice03 medical and health sciencesQH359-425AnimalsBody SizeMus musculusMandible shapeTransgressive phenotypesHybridizationEcology Evolution Behavior and Systematics030304 developmental biologyHybridGenetics[ SDV.BID ] Life Sciences [q-bio]/Biodiversity0303 health sciencesModularity (networks)Geometric morphometricsbiology[SDV.BDD.MOR]Life Sciences [q-bio]/Development Biology/Morphogenesisbiology.organism_classification<it>Mus musculus</it>PhenotypeHouse mouseEvolutionary biologyTraitHybridization GeneticHouse miceTransgressiveResearch Article
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Phylogeography and Molecular Evolution of Potato virus Y

2012

Potato virus Y (PVY) is an important plant pathogen, whose host range includes economically important crops such as potato, tobacco, tomato, and pepper. PVY presents three main strains (PVYO, PVYN and PVYC) and several recombinant forms. PVY has a worldwide distribution, yet the mechanisms that promote and maintain its population structure and genetic diversity are still unclear. In this study, we used a pool of 77 complete PVY genomes from isolates collected worldwide. After removing the effect of recombination in our data set, we used Bayesian techniques to study the influence of geography and host species in both PVY population structure and dynamics. We have also performed selection and…

0106 biological sciencesEvolutionary GeneticsAmino-acid sitesSelective constraintsPotyviruslcsh:Medicine01 natural sciencesAmino-Acid SitesRecombinant strainPlant RNA virusesNegative selectionMaximum-Likelihoodlcsh:Sciencepathologie végétaleSelective ConstraintsPhylogenyGenetics0303 health sciencesCoat proteinMultidisciplinaryNatural selectionVegetal BiologybiologyEcologyGenetic-structurePotyvirusfood and beveragesEuropePhylogeneticsVenous necrosisPhylogeographyPotato virus YBiogeographyVenous NecrosisSequence AnalysisResearch ArticlePlant RNA VirusesGenome ViralMicrobiologyEvolution Molecular03 medical and health sciencesGenetic-StructureMolecular evolutionVirologyMosaic-virus[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEvolutionary SystematicsBiology030304 developmental biologySolanum tuberosumGenetic diversityEvolutionary BiologyMosaic virusHost (biology)Maximum-likelihoodlcsh:RComputational Biologyvirus à de la pomme de terreBayes Theoremlégumebiology.organism_classificationMutational analysisMosaic-VirusMutational AnalysisEvolutionary EcologyRecombinant StrainNorth Americalcsh:QBiologie végétalePopulation Genetics010606 plant biology & botany
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Revision of the calcareous fen arachnofauna: habitat affinities of the fen-inhabiting spiders

2018

Calcareous fens are one of the most species-rich habitats of the temperate zone of the Northern Hemisphere. In spite of this species richness, however, calcareous fens are still rather poorly investigated. Consequently, the data of the fen-associated spider fauna are also largely lacking. The aim of the research was to study the spider fauna of the calcareous fens of Latvia and to draw conclusions about what kind of spider species and ecological groups typically inhabit calcareous fen habitats. Spiders were sampled in the summer months of 2010, 2011, and 2012 at nine different calcareous fens of the coastal lowland of Latvia. The spider collection was performed by pitfall traps and a sweep …

0106 biological sciencesFaunaBiodiversity & Conservationmire habitats010603 evolutionary biology01 natural sciencesMirelcsh:ZoologyTemperate climatespider faunalcsh:QL1-991Ecology Evolution Behavior and SystematicsSpiderCenozoicEcologyAffinitiesLatviaEurope010602 entomologyGeographyHabitatecological groupsAraneaeAnimal Science and ZoologySpecies richnessCalcareousResearch Article
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The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest

2020

Background: Although native to North America, the invasion of the aphid-like grape phylloxera Daktulosphaira vitifoliae across the globe altered the course of grape cultivation. For the past 150 years, viticulture relied on grafting-resistant North American Vitis species as rootstocks, thereby limiting genetic stocks tolerant to other stressors such as pathogens and climate change. Limited understanding of the insect genetics resulted in successive outbreaks across the globe when rootstocks failed. Here we report the 294-Mb genome of D. vitifoliae as a basic tool to understand host plant manipulation, nutritional endosymbiosis, and enhance global viticulture. Results: Using a combination of…

0106 biological sciencesFil·loxeraPhysiology[SDV]Life Sciences [q-bio]Introduced speciesPlant Science01 natural sciencesGenomeGene duplicationsStructural BiologyVitislcsh:QH301-705.5ComputingMilieux_MISCELLANEOUS2. Zero hunger0303 health scienceseducation.field_of_studyHost plant interactionsGenomeEndosymbiosisbiologyfood and beveragesBiological SciencesBiological EvolutionGeneral Agricultural and Biological SciencesRootstockInfectionDaktulosphaira vitifoliaeBiotechnologyResearch ArticlePopulation010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyHemiptera03 medical and health sciencesGeneticsInsect pestsAnimalsPlagues d'insectesAdaptationBiological invasionsGenomeseducationPhylloxeraEcology Evolution Behavior and Systematics030304 developmental biologyObligateHuman GenomeViticulturaCell Biology15. Life on landbiology.organism_classificationBiologicalEffectorsClimate Actionlcsh:Biology (General)13. Climate actionEvolutionary biologyArthropod genomesPhylloxeraAdaptationIntroduced SpeciesInsectAnimal DistributionDevelopmental Biology
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Checklist of gypsophilous vascular flora in Italy

2018

Our understanding of the richness and uniqueness of the flora growing on gypsum substrates in Italy has grown significantly since the 19th century and, even today, new plant species are still being discovered. However, the plants and plant communities, growing on gypsum substrates in Italy, are still a relatively unknown subject. The main aim of this paper was to elaborate a checklist of the Italian gypsophilous flora, to increase knowledge about this peculiar flora and for which conservation efforts need to be addressed. Through a structured group communication process of experts (application of the Delphi technique), a remarkable number of experienced Italian botanists have joined togethe…

0106 biological sciencesFloraEdaphism Gypsophyte Habitats Directive Plant preservationBiodiversity & ConservationPlant SciencePoaceaePlant conservation010603 evolutionary biology01 natural sciencesFloristics & Distributionlcsh:BotanyEndemismEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUSEdaphismEcologyEdaphism Gypsophyte Habitats Directive Plant conservationSettore BIO/02 - Botanica SistematicaSouthern Europe and MediterraneanGypsophyteEuphorbiaceaePlant community15. Life on landSpecies InventoriesEcology Evolution Behavior and SystematicChecklistHabitatslcsh:QK1-989Plant preservationEuropeHabitats DirectiveGeographyTaxonAngiospermaeHabitatBiogeographyecosystems & natural spacesSettore BIO/03 - Botanica Ambientale E ApplicataBrassicaceaeSpecies richnessHabitats DirectiveCatalogues and Checklists010606 plant biology & botanyResearch ArticlePhytoKeys
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Predator encounters have spatially extensive impacts on parental behaviour in a breeding bird community.

2016

Predation risk has negative indirect effects on prey fitness, partly mediated through changes in behaviour. Evidence that individuals gather social information from other members of the population suggests that events in a community may impact the behaviour of distant individuals. However, spatially wide-ranging impacts on individual behaviour caused by a predator encounter elsewhere in a community have not been documented before. We investigated the effect of a predator encounter (hawk model presented at a focal nest) on the parental behaviour of pied flycatchers ( Ficedula hypoleuca ), both at the focal nest and at nearby nests different distances from the predator encounter. We show tha…

0106 biological sciencesFood ChainPopulationspatial impactBiologyAlarm signal010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyFicedula hypoleucaPredationNesting BehaviorSongbirdsFood chainNestpredation riskAnimals0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyeducationSocial informationPredatorFinlandResearch ArticlesGeneral Environmental Scienceeducation.field_of_studyGeneral Immunology and MicrobiologyEcology05 social sciencesFicedulaGeneral Medicinebiology.organism_classificationHawksPredatory Behaviorcommunityta1181CuesGeneral Agricultural and Biological SciencesProceedings. Biological sciences
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Demosponge EST sequencing reveals a complex genetic toolkit of the simplest metazoans.

2010

Sponges (Porifera) are among the simplest living and the earliest branching metazoans. They hold a pivotal role for studying genome evolution of the entire metazoan branch, both as an outgroup to Eumetazoa and as the closest branching phylum to the common ancestor of all multicellular animals (Urmetazoa). In order to assess the transcription inventory of sponges, we sequenced expressed sequence tag libraries of two demosponge species, Suberites domuncula and Lubomirskia baicalensis, and systematically analyzed the assembled sponge transcripts against their homologs from complete proteomes of six well-characterized metazoans--Nematostella vectensis, Caenorhabditis elegans, Drosophila melanog…

0106 biological sciencesGenome evolutionanimal structuresMolecular Sequence Datacomparative genomicsBiologyLubomirskia baicalensis010603 evolutionary biology01 natural sciencesGenomeEvolution Molecular03 medical and health sciencesGeneticsAnimalsCiona intestinalisMolecular BiologyGeneEcology Evolution Behavior and SystematicsPhylogenyResearch Articles030304 developmental biologymetazoan evolution; comparative genomics; genome complexity; Suberites domuncula; Lubomirskia baicalensisComparative genomicsGeneticsExpressed Sequence Tags0303 health sciencesComparative Genomic HybridizationGenomegenome complexityBase SequenceSequence Homology Amino Acidmetazoan evolutionbiology.organism_classificationSuberites domunculaEumetazoaPoriferaSuberites domunculaGene Expression RegulationSuberitesSequence AlignmentSuberitesMolecular biology and evolution
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