Search results for "rhizosphere"

showing 10 items of 112 documents

Different Medicago truncatula genotypes, expressing different phenotypes, modulate microbial functional genes in the rhizosphere

2022

Plants host in their rhizosphere a remarkable diversity of microorganisms that in return promote plant growth and health. Thus, the plant microbiota emerges as a novel component that expand the capacity of plants to adapt to the environment, and thus pave the way for future breeding approaches.It is widely known that different plant species harbor different microbiota, but very few studies showed an impact of the plant genotypes on the microbiota. These contrasting results may depend on the choice of the tested genotypes.We formulate the hypothesis that only those plant genotypes showing high genetic diversity and expressing different phenotypes harbor different rhizosphere microbiota and a…

[SDV] Life Sciences [q-bio]medicago truncatulamicrobial functional genes16S rRNArhizosphereshotgun metagenomic
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Agroecology and Strategies for Climate Change

2012

 ; Sustainable agriculture is a rapidly growing field aiming at producing food and energy in a sustainable way for humans and their children. Sustainable agriculture is a discipline that addresses current issues such as climate change, increasing food and fuel prices, poor-nation starvation, rich-nation obesity, water pollution, soil erosion, fertility loss, pest control, and biodiversity depletion.Novel, environmentally-friendly solutions are proposed based on integrated knowledge from sciences as diverse as agronomy, soil science, molecular biology, chemistry, toxicology, ecology, economy, and social sciences. Indeed, sustainable agriculture decipher mechanisms of processes that occur fro…

[SDE] Environmental SciencesIntegrated pest managementagroecology[SDV.SA]Life Sciences [q-bio]/Agricultural sciences[SDV]Life Sciences [q-bio]Conservation agriculturenematode[SDE.MCG]Environmental Sciences/Global Changeswater use[ SDE.IE ] Environmental Sciences/Environmental Engineeringorganic farmingSustainable agriculturegeneticstransgenic cropsAgroecology[ SDV.SA ] Life Sciences [q-bio]/Agricultural sciencesagriculturesustainable developmentAgroforestrybusiness.industry[SDE.IE]Environmental Sciences/Environmental Engineeringmethaneheavy metalenergy cropManure[SDV] Life Sciences [q-bio][ SDE.MCG ] Environmental Sciences/Global Changesclimate changeconservation agriculturefly ashAgriculturegreenhouse gasmanure[SDE]Environmental SciencesOrganic farmingFood systemsEnvironmental sciencebiofuelfood systembusinessrhizospherepest control
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The establishment of an introduced community of fluorescent pseudomonads in the soil and in the rhizosphere is affected by the soil type

1999

Indigenous populations of fluorescent pseudomonads were previously shown to vary in two different soils (Châteaurenard and Dijon) and in the rhizosphere of a plant species (Linum usitatissimum L.) cultivated in these two soils. These differences could be related to the soil type and to their crop history. In the present study, the influence of the soil type on the diversity of fluorescent pseudomonads in bulk and rhizospheric soils was evaluated. The soils of Châteaurenard and Dijon were sterilized before being inoculated with the same community of fluorescent pseudomonads. Bacterial isolates from bulk and rhizospheric soils were characterized on the basis of their repetitive extragenic pal…

TYPE DE SOLBulk soilPseudomonas fluorescenscomplex mixturesApplied Microbiology and BiotechnologyMicrobiologyCrop03 medical and health sciencesBotany[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyComputingMilieux_MISCELLANEOUS0303 health sciencesRhizosphereEcologybiology030306 microbiology04 agricultural and veterinary sciences15. Life on landbiology.organism_classificationSoil typeColonisation[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyMicrobial population biologyAgronomySoil water040103 agronomy & agriculture0401 agriculture forestry and fisheries
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Drought stress impacts the microbiota mediating iron dynamic in the pea rhizosphere

2022

Agroécologie, INRAE, Institut Agro, Université de Bourgogne - Université de Bourgogne Franche-Comté, Dijon, FranceMicrobiota, with their consortia of genomes, extend the genetic repertoires of host plants to form ‘extended genotypes’, resulting in extended host phenotypes. Trecently, the term ‘holobiont’, which encompasses the host plant plus its associated microbiota, has been proposedHow environmental properties impact both the plant and microbial components of the holobiont, and its phenotype, still remain to be explored.We addressed this question by testing the impact of different abiotic conditions (drought stress and soil pH) on plant and microbial phenotypes in relation to iron. Iron…

[SDV] Life Sciences [q-bio]microbiota;rhizosphere;pea;iron;drought;pea
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Impact of inoculation with the phytostimulatory PGPR Azospirillum lipoferum CRT1 on the genetic structure of the rhizobacterial community of field-gr…

2009

International audience; The phytostimulatory PGPR Azospirillum lipoferum CRT1 was inoculated to maize seeds and the impact on the genetic structure of the rhizobacterial community in the field was determined during maize growth by Automated Ribosomal Intergenic Spacer Analysis (ARISA) of rhizosphere DNA extracts. ARISA fingerprints could differ from one plant to the next as well as from one sampling to the next. Inoculation with strain CRT1 enhanced plant-to-plant variability of the ARISA fingerprints and caused a statistically significant shift in the composition of the indigenous rhizobacterial community at the first two samplings. This is the first study on the ecological impact of Azosp…

Ribosomal Intergenic Spacer analysisSoil ScienceBiology[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studyRhizobacteriaMicrobiologyAzospirillum Rhizosphere ARISA Fingerprint Bacterial community Impact03 medical and health sciencesMicrobial ecologyBotanyPoaceae[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMicrobial inoculant[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular Biology030304 developmental biology2. Zero hunger0303 health sciencesRhizosphere[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyInoculationfood and beverages04 agricultural and veterinary sciencesHorticultureAzospirillum lipoferum040103 agronomy & agriculture0401 agriculture forestry and fisheries[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Interaction between Medicago truncatula and Pseudomonas fluorescens: evaluation of costs and benefits across an elevated atmospheric CO2.

2012

10 pages; International audience; Soil microorganisms play a key role in both plants nutrition and health. Their relation with plant varies from mutualism to parasitism, according to the balance of costs and benefits for the two partners of the interaction. These interactions involved the liberation of plant organic compounds via rhizodeposition. Modification of atmospheric CO2 concentration may affect rhizodeposition and as a consequence trophic interactions that bind plants and microorganisms. Positive effect of elevated CO2 on plants are rather well known but consequences for micoorganisms and their interactions with plants are still poorly understood. A gnotobiotic system has been devel…

0106 biological scienceslcsh:MedicineplantPlant Science01 natural sciencesPlant RootsPlant reproductionnitrogenPlant Microbiologyterrestrial ecosystem[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosislcsh:ScienceSoil Microbiology2. Zero hungerMutualism (biology)Abiotic componentPlant Growth and Development0303 health sciencesRhizospheredynamicMultidisciplinaryresponsebiologyEcologyfood and beveragesMedicago truncatulacarbon-dioxide;terrestrial ecosystem;development;dynamic;nitrogen;plant;soil;rhizosphere;response;Pseudomonas fluorescensSeedsSoil microbiologyEcosystem FunctioningResearch Article[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil studyPseudomonas fluorescensFlowers[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil studycarbon-dioxidePseudomonas fluorescensMicrobiologyEcosystemsMicrobial Ecologysoil03 medical and health sciencesSymbiosisPlant-Environment InteractionsBotanyMedicago truncatulaSymbiosisBiologydevelopment030304 developmental biology[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyAnalysis of VarianceAtmospherePlant Ecologylcsh:RfungiComputational Biology15. Life on landCarbon Dioxidebiology.organism_classificationPlant LeavesAgronomylcsh:Q[SDE.BE]Environmental Sciences/Biodiversity and EcologyrhizosphereEcosystem Modeling010606 plant biology & botany[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Root-induced decomposer growth and plant N uptake are not positively associated among a set of grassland plants

2007

Abstract It is known that plant species can induce development of different soil decomposer communities and that they differ in their influence on organic matter decomposition and N mineralization in soil. However, no study has so far assessed whether these two observations are related to each other. Based on the hypothesis that root-induced growth of soil decomposers leads to accelerated decomposition of SOM and increased plant N availability in soil, we predicted that (1) among a set of grassland plants the abundance of soil decomposers in the plant rhizosphere is positively associated with plant N uptake from soil organic matter. To test this, we established grassland microcosms consisti…

RhizosphereEcologybiologySoil organic matterSoil biologyfungiSoil Sciencefood and beveragesP34 - Biologie du solF62 - Physiologie végétale - Croissance et développementMineralization (soil science)Plant litterbiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)complex mixturesDecomposerAgronomyBotanyLotus corniculatusHolcus lanatus
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Woody Plant Declines. What’s Wrong with the Microbiome?

2020

National audience; Woody plant (WP) declines have multifactorial determinants as well as a biological and economic reality. The vascular system of WPs involved in the transport of carbon, nitrogen, and water from sources to sinks has a seasonal activity, which places it at a central position for mediating plant–environment interactions from nutrient cycling to community assembly and for regulating a variety of processes. To limit effects and to fight against declines, we propose: (i) to consider the WP and its associated microbiota as an holobiont and as a set of functions; (ii) to consider simultaneously, without looking at what comes first, the physiological or pathogenic disorders; and (…

0106 biological sciences0301 basic medicineNitrogenecological engineering[SDV]Life Sciences [q-bio]microbiomePlant ScienceBiology01 natural scienceswoody plant decline03 medical and health scienceshomeostasisMicrobiomeSoil MicrobiologyComputingMilieux_MISCELLANEOUSholobiont2. Zero hungerEcologyMicrobiotaPlants15. Life on landEconomic realityEcological engineeringCarbonHolobiont030104 developmental biology[SDE]Environmental Sciencesrhizosphere010606 plant biology & botanyWoody plantTrends in Plant Science
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Multitrophic interactions in the rhizosphere Rhizosphere microbiology: at the interface of many disciplines and expertises.

2008

The rhizosphere – the soil compartment influenced by the root, including the root itself – is the most-active microbial habitat in soils. Indeed, the release by plant roots of a significant part of their photosynthates promotes microbial abundance and activities in the rhizosphere. This investment made by plants is paid back by microbial functions, which contribute to plant nutrition and protection against soil-borne diseases. Indeed, rhizosphere microorganisms play a major role in plant growth and health and, …

0106 biological sciencesPlant growthMICROBIOLOGYMicroorganismPLANT ZOOLOGYBiology01 natural sciencesApplied Microbiology and BiotechnologyPlant RootsBotanyMICROBIAL COMMUNITIESRELATION PLANTE-MICROORGANISMEMolecular BiologyComputingMilieux_MISCELLANEOUSEcosystemPlant Physiological PhenomenaSoil Microbiology2. Zero hungerRhizosphereMicroscopyEcologyPlant rootsEcologyfungiSignificant partfood and beveragesRHIZOSPHERE04 agricultural and veterinary sciencesPLANT PATHOLOGY15. Life on landPlantsPLANT PHYSIOLOGY[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologySoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesPhyllospherePlant nutrition010606 plant biology & botanyFEMS microbiology ecology
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Cadmium-induced changes in soil biochemical characteristics of oat (Avena sativa L.) rhizosphere during early growth stages

2011

A microcosm was assembled to physically separate soil from roots and was used to study both the impact of living roots on the soil–plant system during early stages of growth and plant responses to abiotic stress. Oat (Avena sativa L.) seedlings were grown in the microcosm unit for 44 days. Twenty-three days after planting, 0.154 mg CdSO4/g dry soil was added. Plants grown in Cd-treated microcosms showed considerable inhibition of shoot growth rates, and leaf chlorophyll content. Soil microbial biomass C and respiration increased with plant age, and most of the measured biochemical indicators decreased with increasing distance from the soil–root interface, thus demonstrating the rhizosphere …

Rhizospherefood.ingredientChemistryAbiotic stressfungiSettore AGR/13 - Chimica Agrariafood and beveragesSoil ScienceSowingEnvironmental Science (miscellaneous)Rhizosphere Microbial activity Heavy metals Microbial biomass Cadmium OatSoil respirationAvenafoodAgronomyShootRespirationMicrocosmEarth-Surface Processes
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