Search results for "rites"

showing 10 items of 427 documents

Temporal coherency between receptor expression, neural activity and AP-1-dependent transcription regulates Drosophila motoneuron dendrite development.

2013

Neural activity has profound effects on the development of dendritic structure. Mechanisms that link neural activity to nuclear gene expression include activity-regulated factors, such as CREB, Crest or Mef2, as well as activity-regulated immediate-early genes, such as fos and jun. This study investigates the role of the transcriptional regulator AP-1, a Fos-Jun heterodimer, in activity-dependent dendritic structure development. We combine genetic manipulation, imaging and quantitative dendritic architecture analysis in a Drosophila single neuron model, the individually identified motoneuron MN5. First, Dα7 nicotinic acetylcholine receptors (nAChRs) and AP-1 are required for normal MN5 dend…

Mef2Transcriptional ActivationEmbryo NonmammalianTime FactorsTranscription GeneticReceptor expressionReceptors NicotinicCREBSynaptic TransmissionAnimals Genetically ModifiedGenes ReporterCa2+/calmodulin-dependent protein kinaseAnimalsDrosophila ProteinsCholinergic synapseCholinergic neuronMolecular BiologyResearch ArticlesCell NucleusDendritic spikeMicroscopy ConfocalbiologyGene Expression Regulation DevelopmentalDendritesImmunohistochemistryCholinergic NeuronsCell biologyEnzyme ActivationTranscription Factor AP-1Drosophila melanogasterMicroscopy Fluorescencebiology.proteinSignal transductionCalcium-Calmodulin-Dependent Protein Kinase Type 2Developmental BiologySignal TransductionDevelopment (Cambridge, England)
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Origin of metazoan stem cell system in sponges: first approach to establish the model (Suberites domuncula).

2003

Abstract It is established that Porifera (sponges) represent the earliest phylum which branched off from the common ancestor of all multicellular animals, the Urmetazoa. In the present study, the hypothesis is tested if, during this transition, pluripotent stem cells were formed which are provided—similar to the totipotent cells (archaeocytes/germ cells)—with a self-renewal capacity. As a model system, primmorphs from the sponge Suberites domuncula were used. These 3D-cell aggregates were cultivated in medium (RPMI 1640/seawater) either lacking silicate and ferric iron or in medium which was supplemented with these ‘morphogenetic’ factors. As molecular markers for the potential existence of…

MesodermMolecular Sequence DataBioengineeringFerric CompoundsEvolution MolecularSequence Analysis ProteinmedicineAnimalsAmino Acid SequenceNogginInduced pluripotent stem cellMolecular BiologyGeneCells CulturedPhylogenybiologySequence Homology Amino AcidGene Expression ProfilingSilicatesStem CellsMesenchymal stem cellGene Expression Regulation DevelopmentalMembrane ProteinsProteinsAnatomybiology.organism_classificationCell biologyPoriferaSuberites domunculaSpongemedicine.anatomical_structureModels AnimalStem cellCarrier ProteinsBiotechnologyBiomolecular engineering
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The role of topography and erosion in the development and architecture of shallow-water coral bioherms (Tortonian-Messinian, Cabo de Gata, SE Spain).

2009

23 pages; International audience; During the Miocene, Mediterranean shallow-water carbonates were rich in scleractinian corals, which thrive in various depositional settings. A Tortonian–Messinian bioherm belt developing in a heterozoan-dominated ramp was investigated along a 1.2 km continuous transect located in the Cabo de Gata region. The interval studied displays four depositional environments from mid-to-inner ramp, dominated by swell waves and storm energy, deposited as a single, large-scale depositional sequence during a 3rd to 4th order transgressive–regressive cycle. The bioherms grew in three phases, and were essentially composed of inplace primary frameworks. Three coral genera w…

Micro-encrusters010506 paleontologySettore GEO/02 - Geologia Stratigrafica E SedimentologicaStormsCoralPorites010502 geochemistry & geophysicsOceanography[ SDU.STU.ST ] Sciences of the Universe [physics]/Earth Sciences/Stratigraphy01 natural sciencesSedimentary depositional environmentBiohermPaleontologyStormBack-reef erosionPalaeotopography14. Life underwaterTransectEcology Evolution Behavior and SystematicsSea level0105 earth and related environmental sciencesEarth-Surface ProcessesMicro-encrustergeographygeography.geographical_feature_categorybiologyPaleontologySettore GEO/01 - Paleontologia E Paleoecologiabiology.organism_classificationWaves and shallow waterVolcano[SDU.STU.ST]Sciences of the Universe [physics]/Earth Sciences/StratigraphyErosionCoralGeology
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Oxygen as a morphogenic factor in sponges: expression of a tyrosinase gene in the sponge Suberites domuncula

2004

Sponges live in a symbiotic relationship with microorganisms, especially bacteria. Here we show, using the demosponge Suberites domuncula as a model, that the sponge expresses the enzyme tyrosinase which synthesizes diphenols from monophenolic compounds. It is assumed that these products serve as carbon source for symbiotic bacteria to grow.

MicroorganismTyrosinaseMolecular Sequence DataGeneral Physics and AstronomyMicrobiologyDemospongeStructural BiologyAnimalsHumansGeneral Materials ScienceAmino Acid SequenceSymbiosisPhylogenychemistry.chemical_classificationbiologyMonophenol MonooxygenaseCell Biologybiology.organism_classificationPoriferaOxygenSuberites domunculaSpongeEnzymechemistryBiochemistrySequence AlignmentBacteriaSymbiotic bacteriaMicron
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Fibres optiques à coeur supendu en verre d'oxyde de tellure et génération d'effets non linéaires dans l'infrarouge au-delà de 2 microns

2012

The work reported in this thesis deals with the fabrication of suspended core tellurite microstructured optical fibers (MOFs) for supercontinuum generation beyond 2 µm. In order to reach our aim, we first studied thermal and optical properties of TeO2-ZnO-R2O and TeO2-WO3-R2O (where R = Li, Na and K) glasses. The glass 80TeO2-10ZnO-10Na2O (molar %) has been chosen in order to make MOFs for characterization of the generated non linear optical effects. Synthesis performed under dry and oxidative atmosphere allowed us to reduce the hydroxyl groups concentration by a factor of 30 compared to fabrication in air atmosphere. Use of dehydrating agents (ZnF2 and TeCl4) allowed to reduce again the OH…

Microstructured optical fibers[SPI.OTHER]Engineering Sciences [physics]/OtherTellurite glasses[ SPI.OTHER ] Engineering Sciences [physics]/OtherNon-linéarités optiques[SPI.OTHER] Engineering Sciences [physics]/Other[CHIM.OTHE] Chemical Sciences/Other[ CHIM.OTHE ] Chemical Sciences/OtherOptical non linearitiesFibres optiques microstructuréesVerres de telluritesSupercontinuum[CHIM.OTHE]Chemical Sciences/Other
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Mutations in KATNB1 Cause Complex Cerebral Malformations by Disrupting Asymmetrically Dividing Neural Progenitors

2014

SummaryExome sequencing analysis of over 2,000 children with complex malformations of cortical development identified five independent (four homozygous and one compound heterozygous) deleterious mutations in KATNB1, encoding the regulatory subunit of the microtubule-severing enzyme Katanin. Mitotic spindle formation is defective in patient-derived fibroblasts, a consequence of disrupted interactions of mutant KATNB1 with KATNA1, the catalytic subunit of Katanin, and other microtubule-associated proteins. Loss of KATNB1 orthologs in zebrafish (katnb1) and flies (kat80) results in microcephaly, recapitulating the human phenotype. In the developing Drosophila optic lobe, kat80 loss specificall…

Microtubule-associated proteinNeurogenesisNeuroscience(all)Cell CountKataninSpindle ApparatusBiologymedicine.disease_causeArticleMice03 medical and health sciences0302 clinical medicineNeural Stem CellsNeuroblastmedicineAnimalsDrosophila ProteinsHumansProgenitor cellZebrafishMitosisZebrafishAdenosine TriphosphatasesMutationGeneral NeuroscienceOptic Lobe NonmammalianBrainDendritesbiology.organism_classificationSpindle apparatusmedicine.anatomical_structureCentrosome030220 oncology & carcinogenesisCerebral malformationsMutationMicrocephalybiology.proteinDrosophilaNeuronKataninMicrotubule-Associated ProteinsNeuroscienceCell Division030217 neurology & neurosurgery
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Mitochondrial genome of Suberites domuncula: palindromes and inverted repeats are abundant in non-coding regions.

2007

The 26,300-nucleotide sequence of the mitochondrial DNA (mtDNA) molecule of the demosponge Suberites domuncula (Olivi, 1792), the largest in size yet found in Porifera, has been determined. We describe the second hadromerid sponge mitochondrial genome that contains the same set of 41 genes as the hadromerid sponge Tethya actinia, including trnMe(cau), trnI2(cau), trnR2(ucu), and atp9, all of which are transcribed in the same direction. Furthermore, rRNA genes for the small and large ribosomal subunit are very long, rns is indeed the longest among Metazoa (1833 bp). Intergenic regions (IGR) comprise about 25% of S. domuncula mtDNA and include numerous direct and inverted repeats, as well as …

Mitochondrial DNAInverted repeatMolecular Sequence DataSuberites ficusDNA MitochondrialIntergenic regionRNA TransferSpecies SpecificityLarge ribosomal subunitSequence Homology Nucleic AcidGeneticsAnimalsGenePhylogenyRepetitive Sequences Nucleic AcidGeneticsPorifera ; Hadromerida ; mtDNA ; mitochondrial evolution ; polymorphismsBase CompositionbiologyBase SequenceGenetic VariationGeneral MedicineRibosomal RNAbiology.organism_classificationSuberites domunculaGenome MitochondrialDNA IntergenicSuberitesGene
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Nocturnin in the demosponge Suberites domuncula: a potential circadian clock protein controlling glycogenin synthesis in sponges

2012

Sponges are filter feeders that consume a large amount of energy to allow a controlled filtration of water through their aquiferous canal systems. It has been shown that primmorphs, three-dimensional cell aggregates prepared from the demosponge Suberites domuncula and cultured in vitro , change their morphology depending on the light supply. Upon exposure to light, primmorphs show a faster and stronger increase in DNA, protein and glycogen content compared with primmorphs that remain in the dark. The sponge genome contains nocturnin, a light/dark-controlled clock gene, the protein of which shares a high sequence similarity with the related molecule of higher metazoans. The sponge nocturnin …

Models MolecularAryl hydrocarbon receptor nuclear translocatorGlycogeninPeriod (gene)Circadian clockGene ExpressionBiochemistry03 medical and health sciencesCryptochromeComplementary DNAAnimalsRNA Messenger14. Life underwaterMolecular BiologyDNA PrimersGlycoproteins030304 developmental biology0303 health sciencesBase SequencebiologyCircadian Rhythm Signaling Peptides and Proteins030302 biochemistry & molecular biologyNuclear ProteinsCell Biologybiology.organism_classificationCircadian RhythmSuberites domunculaCLOCKBiochemistryGlucosyltransferasesSuberitesTranscription FactorsBiochem. J.
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Fractal-related assembly of the axial filament in the demosponge Suberites domuncula: relevance to biomineralization and the formation of biogenic si…

2007

Abstract The siliceous spicules of sponges (Porifera) show great variations of sizes, shapes and forms; they constitute the chief supporting framework of these animals; these skeletal elements are synthesized enzymatically by silicatein. Each sponge species synthesizes at least two silicateins, which are termed − α and − β . In the present study, using the demosponge Suberites domuncula , we studied if the silicateins of the axial filament contribute to the shape formation of the spicules. For these experiments native silicateins have been isolated by a new Tris/glycerol extraction procedure. Silicateins isolated by this procedure are monomeric (24 kDa), but readily form dimers through non-…

Models MolecularBiophysicsBioengineeringNanotechnologyBiomaterialsProtein filamentchemistry.chemical_compoundDemospongeSponge spiculeMicroscopy Electron TransmissionAnimalsAmino Acid SequenceCytoskeletonBinding SitesbiologyAnimal StructuresSilicon Dioxidebiology.organism_classificationImmunohistochemistryPoriferaSuberites domunculaSpongeFractalsMonomerchemistryMechanics of MaterialsCeramics and CompositesBiophysicsSelf-assemblyDimerizationBiomineralization
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Strombine dehydrogenase in the demosponge Suberites domuncula: Characterization and kinetic properties of the enzyme crucial for anaerobic metabolism

2008

Previously, the cDNA and the respective gene for a presumed tauropine dehydrogenase (TaDH) from Suberites domuncula (GenBank accession nos. AM712888, AM712889) had been annotated. The conclusion that the sequences encode a TaDH had been inferred from the 68% identity with the TaDH protein from the marine demosponge Halichondria japonica. However, subsequent enzymatic assays shown here indicate that the presumed S. domuncula opine dehydrogenase is in fact a strombine dehydrogenase (StDH). The enzyme StDH is highly specific for glycine and is inhibited by an excess of the substrate pyruvate. Besides kinetic data, we report in this study also on the predicted tertiary and quaternary structure …

Models MolecularPhysiologyGlycineDehydrogenaseBiochemistrySubstrate SpecificityComplementary DNAPyruvic AcidAnimalsAnaerobiosisProtein Structure QuaternaryMolecular Biologychemistry.chemical_classificationOxidoreductases Acting on CH-NH Group DonorsStrombine dehydrogenasebiologyTauropine dehydrogenaseAnaerobic metabolism; Demospongiae; Opine dehydrogenase; Strombine dehydrogenase; Suberites domunculabiology.organism_classificationProtein Structure TertiarySuberites domunculaKineticsEnzymechemistryBiochemistryGlycineFemaleProtein quaternary structureProtein MultimerizationSuberites
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