Search results for "rivers"

showing 10 items of 222 documents

Do invasive alien plants really threaten river bank vegetation? : a case study based on plant communities typical for Chenopodium ficifolium : an ind…

2018

Riparian zones are very rich in species but subjected to strong anthropogenic changes and extremely prone to alien plant invasions, which are considered to be a serious threat to biodiversity. Our aim was to determine the spatial distribution of Chenopodium ficifolium, a species demonstrating strong confinement to large river valleys in Central Europe and an indicator of annual pioneer nitrophilous vegetation developing on river banks, which are considered to be of importance to the European Community. Additionally, the habitat preferences of the species were analysed. Differences in the richness and abundance of species diagnostic for riverside habitats, as well as the contribution of resi…

0106 biological sciencesPopulation Dynamicslcsh:MedicineInvasive SpeciesMarine and Aquatic SciencesIntroduced speciesPlant Science01 natural scienceslcsh:ScienceConservation ScienceMultidisciplinarygeography.geographical_feature_categoryEcologyGeographyEcologyEukaryotaVegetationBiodiversityPlantsHabitatsGeographyHabitatResearch ArticleFreshwater EnvironmentsEcological Metrics010603 evolutionary biologyChenopodiumSpecies ColonizationRiversPlant CommunitiesEcosystemRiparian zonePopulation DensityPlant Ecologylcsh:REcology and Environmental SciencesOrganismsSpecies diversityAquatic EnvironmentsBiology and Life SciencesPlant communitySpecies DiversityBodies of WaterWetlandsEarth SciencesPlant coverlcsh:QSpecies richnessPolandIntroduced Species010606 plant biology & botany
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Carbon metabolic rates and GHG emissions in different wetland types of the Ebro Delta

2020

Deltaic wetlands are highly productive ecosystems, which characteristically can act as C-sinks. However, they are among the most threatened ecosystems, being very vulnerable to global change, and require special attention towards its conservation. Knowing their climate change mitigating potential, conservation measures should also be oriented with a climatic approach, to strengthen their regulatory services. In this work we studied the carbon biogeochemistry and the specific relevance of certain microbial guilds on carbon metabolisms of the three main types of deltaic wetlands located in the Ebro Delta, north-eastern Spain, as well as how they deal with human pressures and climate change ef…

0106 biological sciencesSalinityTopographyMarsh010504 meteorology & atmospheric sciencesMethanogensMarine and Aquatic SciencesFresh WaterWetlandChenopodiaceaeCarbon sequestrationPhysical Chemistry01 natural sciencesSoilRNA Ribosomal 16SSoil MicrobiologySedimentary GeologyMultidisciplinarygeography.geographical_feature_categoryEcologyEcologyMicrobiotaQREukaryotaAgricultureGeologyPlanktonChemistrySalt marshPhysical SciencesDelta EcosystemsMedicineMethaneResearch ArticleFreshwater EnvironmentsCarbon SequestrationClimate ChangeScienceMarshes574EcosystemsWetland EcosystemsGreenhouse GasesRiversAnimalsEcosystemPetrology0105 earth and related environmental sciencesLandformsgeographyBrackish water010604 marine biology & hydrobiologyEcology and Environmental SciencesOrganismsAquatic EnvironmentsBiology and Life SciencesGeomorphologyNutrientsCarbon DioxideInvertebratesArchaeaCarbonSalinityChemical PropertiesSpainWetlandsEarth SciencesMetagenomeEnvironmental scienceSedimentEutrophicationPLOS ONE
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Variation and covariation in infectivity, virulence and immunodepression in the host-parasite association Gammarus pulex-Pomphorhynchus laevis.

2009

Parasites often manipulate host immunity for their own benefit, either by exacerbating or suppressing the immune response and this may directly affect the expression of parasite virulence. However, genetic variation in immunodepression, which is a prerequisite to its evolution, and the relationship between immunodepression and virulence, have rarely been studied. Here, we investigated the variation among sibships of the acanthocephalan parasite, Pomphorhynchus laevis , in infecting and in immunodepressing its amphipod host, Gammarus pulex . We also assessed the covariation between infectivity, parasite-induced immune depression and host mortality (parasite virulence). We found that infecti…

0106 biological sciencesVirulencephenoloxidaseparasite-induced immunodepression[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyMicrobiologyAcanthocephalaHost-Parasite Interactions03 medical and health sciencesImmune systemRiversImmunityResearch articlesImmune Tolerance[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hostingAnimalsAmphipoda030304 developmental biologyGeneral Environmental ScienceInfectivity0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyGeneral Immunology and MicrobiologybiologycovariationHost (biology)Monophenol MonooxygenaseGeneral Medicinebiology.organism_classificationSurvival Analysis3. Good healthacanthocephalanvirulenceGammarus pulex[SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologyImmunologyimmune defencesPomphorhynchus laevisFrance[SDE.BE]Environmental Sciences/Biodiversity and EcologyGeneral Agricultural and Biological Sciences[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Cucumispora dikerogammari n. gen. (Fungi: Microsporidia) infecting the invasive amphipod Dikerogammarus villosus: a potential emerging disease in Eur…

2010

SUMMARYDikerogammarus villosusis an invasive amphipod that recently colonized the main rivers of Central and Western Europe. Two frequent microsporidian parasites were previously detected in this species, but their taxonomic status was unclear. Here we present ultrastructural and molecular data indicating that these two parasites are in fact a single microsporidian species. This parasite shares numerous characteristics ofNosemaspp. It forms elongate spores (cucumiform), developing in direct contact with host cell cytoplasm; all developmental stages are diplokaryotic and the life cycle is monomorphic with disporoblastic sporogony. Initially this parasite was described asNosema dikerogammariO…

0106 biological sciences[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologySSU rDNAZoologybiological invasion[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyphylogeny010603 evolutionary biology01 natural sciencesDikerogammarus villosusHost-Parasite InteractionsCucumispora gen. sp03 medical and health sciencesNosema dikerogammariMicroscopy Electron TransmissionRiversSpecies Specificity[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hostingAnimals[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyAmphipodaCucumispora gen. sp.DNA FungalRibosomal DNA030304 developmental biology0303 health sciencesLife Cycle Stages[ SDE.BE ] Environmental Sciences/Biodiversity and EcologybiologyDikerogammarus villosusSequence Analysis DNASpores Fungalbiology.organism_classificationEuropeInfectious DiseasesNosemaMicrosporidiaHost cell cytoplasmMicrosporidiaAnimal Science and ZoologyParasitologyPolar filament[SDE.BE]Environmental Sciences/Biodiversity and EcologySequence AlignmentHorizontal transmission[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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The “Porţile de Fier/Iron Gates” Nature Park (Romania) Some Danube Northern Tributaries Fish Fauna

2014

Abstract The relative larger size of the Berzasca River, respectively the relatively constant environmental conditions, with relatively stenotopic ichthyocenosis, suffered small qualitative and quantitative fish fauna modifications in time, compared to the smaller rivers such as Sirinia, Liubcova/Oreviţa and Mraconia. The Danube “Iron Gates” I Lake influences the lower sectors of the studied rivers in term of fish species exchange. The accidental droughts in the karstic zones of the studied lotic sectors have a negative influence on the spatial continuity of the local fish fauna, and the climate change can increase these influence in the future. All the studied rivers play an important role…

0106 biological sciencesgeographygeography.geographical_feature_categoryRiver ecosystemberzascaEcology010604 marine biology & hydrobiologyFaunaClimate changefish fauna010501 environmental sciencesKarst01 natural sciencesliubcova and mraconia riversFisherysiriniaHabitatNature parkTributaryFish <Actinopterygii>QH540-549.50105 earth and related environmental sciencesTransylvanian Review of Systematical and Ecological Research
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The effect of buffer strip width and selective logging on streamside plant communities

2019

Background Riparian forests surrounding streams host high biodiversity values, but are threatened by clear-cut logging. Narrow buffer strips of about 15 m are commonly left between the stream and the clear-cut, but studies suggest that the buffer width should be at least 30 m to protect riparian plant communities. Moreover, selective logging is often allowed on the buffer strips in order to increase economic gain. We used an experiment of 43 riparian sites where buffer strip width and selective logging within the strip were manipulated and supplemented with unlogged control sites. We report the short-term changes in the community composition of vascular plants and mosses near the stream (0–…

0106 biological scienceshakkuutselective loggingBuffer striplehtisammalet01 natural sciencesTreeswoodland key habitatsWoodland key habitatsFinlandQH540-549.5General Environmental Sciencegeography.geographical_feature_categoryharsintaForest managementEcologybiologyEcologymetsänkäsittelyLoggingForestrykasvillisuusBiodiversityPlantsSelective loggingmetsiensuojeluluonnonsuojelusuojavyöhykkeetkonservointiResearch ArticleVascular plantConservation of Natural ResourcespurotConservationSTREAMS010603 evolutionary biologyBuffer (optical fiber)RiversMossesRiparian forestEcology Evolution Behavior and SystematicsRiparian zoneHydrologygeographyVascular plants010604 marine biology & hydrobiologyPlant communitybiology.organism_classificationbiodiversiteettiputkilokasvitEnvironmental scienceBMC Ecology
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Are there so many congeneric species of chironomid larvae in a small stream?

2018

The co-occurrence of larvae of congeneric chironomid species is common in natural stream assemblages, and raises the problem of finding mechanisms to explain the co-existence of species with similar ecological requirements. In this contribution, we explored the co-occurrence of chironomid larvae belonging to congeneric species within four genera of chironomids: Cricotopus, Eukiefferiella, Orthocladius and Rheocricotopus (with 2, 7, 2 and 4 species, respectively) in the headwaters of a small Mediterranean calcareous stream. Due to the intrinsic, natural spatial and temporal variability in these habitats, we studied three different sites at two different seasons within the annual hydrological…

0106 biological scienceshydraulicsZoology010501 environmental sciencesAquatic ScienceBiology01 natural sciencesMediterrània (Regió)ChironomidsRiversco-occurrencelcsh:Physical geographylcsh:Environmental sciencesCursos d'aigua0105 earth and related environmental sciencesWater Science and Technologylcsh:GE1-350Ecologymicrohabitat.Mediterranean RegionDiptera010604 marine biology & hydrobiologylcsh:Geography. Anthropology. Recreationnichelcsh:GDípterscongeneric specieslcsh:GB3-5030Chironomid larvaeJournal of Limnology
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Short sea migration and precocious maturation in reared Atlantic salmon post-smolts in the northern Baltic Sea

2017

Abstract Atlantic salmon (Salmo salar L.) display significant variation in life history traits, including migration patterns and age at maturity. Hatchery rearing has been shown to affect the life history, and rearing-induced changes may include unfavourable consequences, e.g. shortened sea migration period and smaller size at maturity. We report on a new phenomenon of life history of reared Atlantic salmon in the Baltic Sea area: small-sized salmon returning to freshwater only a few months after release as smolts. These “one-sea-summer (1SS)” salmon were ca. 35 cm in length and weighed ca. 400 g, being clearly larger than smolts, but substantially smaller than one-sea-winter (1SW) salmon f…

0106 biological scienceslohiAquatic ScienceBiologyOceanography010603 evolutionary biology01 natural sciencesmigraatio (biologia)StockingLife historyEcology Evolution Behavior and Systematicsanimal migrationMaturity (geology)Ecologymaturation010604 marine biology & hydrobiologylife storysea-age at maturitysalmonregulated riversstockingsalmo salarFisheryBaltic seata1181joetkypsyminenICES Journal of Marine Science
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Genetic and Epigenetic Characteristics of Inflammatory Bowel Disease-Associated Colorectal Cancer.

2021

doi: 10.1053/j.gastro.2021.04.042 Background & Aims Inflammatory bowel disease (IBD) is a chronic, relapsing inflammatory disorder associated with an elevated risk of colorectal cancer (CRC). IBD-associated CRC (IBD-CRC) may represent a distinct pathway of tumorigenesis compared to sporadic CRC (sCRC). Our aim was to comprehensively characterize IBD-associated tumorigenesis integrating multiple high-throughput approaches, and to compare the results with in-house data sets from sCRCs. Methods Whole-genome sequencing, single nucleotide polymorphism arrays, RNA sequencing, genome-wide methylation analysis, and immunohistochemistry were performed using fresh-frozen and formalin-fixed tissue sam…

0301 basic medicineEpigenomicsMaleColorectal cancerDNA Mutational AnalysisPHENOTYPEmedicine.disease_causeEpigenesis GeneticPATHWAY0302 clinical medicineMUTATIONAL PROCESSESDRIVERSTumor MicroenvironmentFinlandOligonucleotide Array Sequence AnalysisAged 80 and overDNA methylationMETHYLATIONGastroenterologyWnt signaling pathwaytulehdukselliset suolistosairaudetHigh-Throughput Nucleotide SequencingMiddle AgedDNA-metylaatio3. Good healthCell Transformation NeoplasticepigenetiikkaDNA methylationCONSENSUS MOLECULAR SUBTYPES030211 gastroenterology & hepatologyFemaleconsensus molecular subtypeKRASgeneettiset tekijätAdultEpithelial-Mesenchymal TransitionINTESTINAL INFLAMMATIONConsensus Molecular Subtype3122 Cancersepithelial-mesenchymal transitioncolorectal cancersuolistosyövätBiology3121 Internal medicinePolymorphism Single Nucleotide03 medical and health sciencesinflammatory bowel diseaseCOLONAXIN2medicineBiomarkers TumorHumansEpithelial–mesenchymal transitionEpigeneticsneoplasmsSIGNATURESAgedNeoplasm StagingColorectal CancerHepatologyWhole Genome SequencingSequence Analysis RNAGene Expression ProfilingInflammatory Bowel DiseaseDNA Methylationmedicine.diseaseInflammatory Bowel DiseasesEVOLUTIONdigestive system diseases030104 developmental biologyMutationCancer research3111 BiomedicineColitis-Associated NeoplasmsNeoplasm GradingCarcinogenesisTranscriptomeGastroenterology
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High food quality increases infection of Gammarus pulex (Crustacea: Amphipoda) by the acanthocephalan parasite Pomphorhynchus laevis.

2019

13 pages; International audience; Parasitism is an important process in ecosystems, but has been largely neglected in ecosystem research. However, parasites are involved in most trophic links in food webs with, in turn, a major role in community structure and ecosystem processes. Several studies have shown that higher nutrient availability in ecosystems tends to increase the prevalence of parasites. Yet, most of these studies focused on resource availability, whereas studies investigating resource quality remain scarce. In this study, we tested the impact of the quality of host food resources on infection by parasites, as well as on the consequences for the host. Three resources were used t…

0301 basic medicineMaleAmphipodaTime FactorsSurvivalgrowth030231 tropical medicineVideo RecordingParasitismZoologyKaplan-Meier Estimatefood qualityParasite LoadAcanthocephalaFood SupplyHost-Parasite Interactions03 medical and health sciences0302 clinical medicineRiversEcological stoichiometryAnimalsEcosystemAmphipoda[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyEcosystemTrophic level2. Zero hungerBehaviorExperimental infestationecological stoichiometrybiologyPlant litterbiology.organism_classificationParasiteGammarus pulex030104 developmental biologyInfectious DiseasesRegression AnalysisParasitologyPomphorhynchus laevisFemale[SDE.BE]Environmental Sciences/Biodiversity and EcologyLocomotion[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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