Search results for "scattering"

showing 10 items of 8332 documents

The Allosteric Effector l-Lactate Induces a Conformational Change of 2×6-meric Lobster Hemocyanin in the Oxy State as Revealed by Small Angle X-ray S…

2001

Abstract Hemocyanins are multisubunit respiratory proteins found in many invertebrates. They bind oxygen highly cooperatively. However, not much is known about the structural basis of this behavior. We studied the influence of the physiological allosteric effectorl-lactate on the oxygenated quaternary structure of the 2×6-meric hemocyanin from the lobster Homarus americanus employing small angle x-ray scattering (SAXS). The presence of 20 mm l-lactate resulted in different scattering curves compared with those obtained in the absence of l-lactate. The distance distribution functionsp(r) indicated a more compact molecule in presence ofl-lactate, which is also reflected in a reduction of the …

Conformational changeProtein ConformationScatteringChemistrySmall-angle X-ray scatteringmedicine.medical_treatmentAllosteric regulationHemocyaninCell BiologyBiochemistryNephropidaeMicroscopy ElectronCrystallographyAllosteric RegulationHemocyaninsRadius of gyrationmedicineAnimalsScattering RadiationProtein quaternary structureLactic AcidMolecular BiologyOxygen bindingJournal of Biological Chemistry
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Small-angle neutron scattering reveals an oxygen-dependent conformational change of the immunogen keyhole limpet hemocyanin type 1 (KLH1).

2001

The respiratory protein of the keyhole limpet, Megathura crenulata, the hemocyanin (KLH), commonly used as an immunogen, binds oxygen cooperatively, which implies the existence of different conformations. For the first time, two different conformations of KLH1 were detected upon oxygenation, a deoxy and an oxy state, using small-angle neutron scattering. Rearrangements in the quaternary structure of KLH1 were predicted from the different radii of gyration and the shifts of the minima and maxima in the scattering curves. Upon oxygenation, KLH1 becomes smaller and more compact. Model reconstruction of KLH1 indicates a hollow cylinder with two rings located close to both ends, which move sligh…

Conformational changeProtein Conformationmedicine.medical_treatmentBiophysicsNeutron scatteringMegathura crenulataBiophysical PhenomenamedicineAnimalsScattering RadiationProtein Structure QuaternaryNeutronsbiologyChemistryScatteringHemocyaninGeneral Medicinebiology.organism_classificationSmall-angle neutron scatteringRespiratory proteinOxygenCrystallographyMolluscaHemocyaninsbiology.proteinKeyhole limpet hemocyaninProtein BindingEuropean biophysics journal : EBJ
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Protofibril formation of amyloid beta-protein at low pH via a non-cooperative elongation mechanism.

2005

Deposition of the amyloid beta-protein (Abeta) in senile or diffuse plaques is a distinctive feature of Alzheimer's disease. The role of Abeta aggregates in the etiology of the disease is still controversial. The formation of linear aggregates, known as amyloid fibrils, has been proposed as the onset and the cause of pathological deposition. Yet, recent findings suggest that a more crucial role is played by prefibrillar oligomeric assemblies of Abeta that are highly toxic in the extracellular environment. In the present work, the mechanism of protofibril formation is studied at pH 3.1, starting from a solution of oligomeric precursors. By combining static light scattering and photon correla…

Conformational changeTime FactorsAmyloidLightNucleationBiophysicsBiochemistryBiophysical PhenomenaDiffusionDynamic light scatteringAlzheimer DiseaseExtracellularHumansScattering RadiationStatic light scatteringMolecular BiologyCoalescence (physics)PhotonsAmyloid beta-PeptidesModels StatisticalDose-Response Relationship DrugChemistryTemperatureCell BiologyHydrogen-Ion ConcentrationModels TheoreticalCrystallographyKineticsSpectrophotometryBiophysicsThermodynamicsElongationPeptidesProtein BindingThe Journal of biological chemistry
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Convection and thermodiffusion of colloidal gold tracers by laser light scattering

1999

In a dynamic light scattering experiment, we have investigated the time intensity correlation function and the profile of the transmitted laser beam for organic dispersions of light absorbing colloidal particles containing tiny gold clusters. The correlation functions have been found to show a superposition of an exponential decay, corresponding to Brownian motion of the tracers, and well-defined oscillations. These oscillations are caused by convection due to local heating of the sample by the incident laser beam, which has been confirmed independently via measurements of the local temperature within the sample. It will be shown how the particle convection velocity, which is the order of 1…

ConvectionCorrelation function (statistical mechanics)Materials scienceOpticsDynamic light scatteringScatteringbusiness.industryParticleElectrophoretic light scatteringDiffusion (business)Dispersion (chemistry)businessMolecular physicsPhysical Review E
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A study of hydrothermal convection in saturated porous media

1993

Abstract Because of its relevance to many geological and technical problems, hydrothermal convection is investigated here mainly with the aid of numerical models by a systematic analysis of the properties of this type of convection for a range of super-critical Rayleigh numbers. Calculations were performed for two-dimensional models with constant properties in a region of aspect ratio 2. The principal results in the case of temperature fixed at the impermeable top and bottom are the following for the Nusselt number Nu, the cell aspect ratio a, and the boundary layer thickness δ: Nu ≈ 1.7 R0.5, a ≈ 1.3 R−0.4, δc ≈ 0.4 R−0.4 for 2.5 R = R f /R f ∗ and Rf and R f ∗ are the ambient and critical…

ConvectionThermodynamicsFunction (mathematics)Rayleigh numberBoundary layer thicknessNusselt numberPhysics::Fluid Dynamicssymbols.namesakeGeophysicsThermal conductivityHeat fluxsymbolsRayleigh scatteringGeologyEarth-Surface ProcessesTectonophysics
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Vibrational properties of 1D- and 3D polynuclear spin crossover Fe(II) urea-triazoles polymer chains and quantification of intrachain cooperativity

2020

Abstract The vibrational dynamics of the iron centres in 1D and 3D spin crossover Fe(II) 4-alkyl-urea triazole chains have been investigated by synchrotron based nuclear inelastic scattering. For the 1D system, the partial density of phonon states has been modelled with density functional theory methods. Furthermore, spin dependent iron ligand distances and vibrational modes were obtained. The previously introduced intramolecular cooperativity parameter H coop (Rackwitz et al, Phys. Chem. Chem. Phys. 2013, 15, 15450) has been determined to −31 kJ mol−1 for [Fe(n-Prtrzu)3(tosylate)2] and to +27 kJ mol−1 for [Fe(n-Prtrzu)3(BF4)2]. The change of sign in H coop is in line with the incomplete an…

Coordination sphereMaterials scienceSpin statesSpin transitionCooperativity02 engineering and technologyInelastic scattering021001 nanoscience & nanotechnologyCondensed Matter Physics01 natural sciencesCrystallographySpin crossoverIntramolecular force0103 physical sciencesGeneral Materials ScienceDensity functional theory010306 general physics0210 nano-technologyJournal of Physics: Condensed Matter
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Plasmon de surface de particules métalliques toroïdales

2006

This thesis deals with the optical properties of small metal torii. A method of resolution of the equation of Laplace in toroidal coordinates is introduced and the radiative properties of the metal toric nanoparticules are studied within the electrostatic framework. The study on the eigenmodes spatial distribution suggests that metal nanotorus can carry a non-zero magnetic dipole moment at optical frequencies. Analytical expressions for the extinction and scattering cross sections of the torus are also found and compared with numerical simulations and experimental results obtained with collaborations. The sensitivity of the plasmon frequency to the refraction index of the external medium an…

Coordonnées toroïdalesPlasmon de surfaceextinctiondipôle magnétiqueNon-retarded approximationtenseur de Green[PHYS.MPHY] Physics [physics]/Mathematical Physics [math-ph]TorusScatteringModes propresDiffusionGreen dyadic methodSurface plasmonabsoptionApproximation non retardéedipôle électrique[ PHYS.MPHY ] Physics [physics]/Mathematical Physics [math-ph]Eigenmode
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A wideband car-to-car channel model based on a geometrical semicircular tunnel scattering model

2013

In this paper, we present a wideband single-input single-output (SISO) car-to-car (C2C) channel model based on a geometrical semicircular tunnel (SCT) scattering model. Starting from the geometrical scattering model, a reference channel model is derived under the assumption of single-bounce scattering in line-of-sight (LOS) and non-LOS (NLOS) propagation environments. In the proposed channel model, it is assumed that an infinite number of scatterers are uniformly distributed on the tunnel wall. Starting from the geometrical scattering model, the time-variant transfer function (TVTF) is derived and its correlation properties are studied. Expressions are presented for the two-dimensional (2D)…

Correlation function (statistical mechanics)Computer sciencebusiness.industryScatteringMultiple integralAutocorrelationMathematical analysisWidebandTelecommunicationsbusinessTransfer function2013 IEEE 24th Annual International Symposium on Personal, Indoor, and Mobile Radio Communications (PIMRC)
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Surface-directed spinodal decomposition in a thin-film geometry: A computer simulation

1994

The phase separation kinetics of a two-dimensional binary mixture at critical composition confined between (one-dimensional) straight walls which preferentially attract one component of the mixture is studied for a wide range of distancesD between the walls. Following earlier related work on semiinfinite systems, two choices of surface forces at the walls are considered, one corresponding to an incompletely wet state of the walls, the other to a completely wet state (forD→∞). The nonlinear Cahn-Hilliard-type equation, supplemented with appropriate boundary conditions which account for the presence of surfaces, is replaced by a discrete equivalent and integrated numerically. Starting from a …

Correlation function (statistical mechanics)Materials scienceCharacteristic lengthScatteringSpinodal decompositionSurface forceStatistical and Nonlinear PhysicsGeometryBoundary value problemStructure factorScalingMathematical PhysicsJournal of Statistical Physics
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Time-Dependent Correlation and Response Functions

2014

The dynamics of liquids is discussed with the help of time-dependent correlation functions. They are related to response functions by the fluctuation-dissipation theorem. This theorem enables to relate experimentally measured inelastic scattering data to the Fourier-transformed correlation and response functions. The Laplace transform of the correlation functions can be represented as a continuous fraction with suitable residual terms (memory functions). The projection formalism of Mori and Zwanzig is introduced.

CorrelationPhysicsFormalism (philosophy of mathematics)Laplace transformMathematical analysisMemory functionsInelastic scatteringResidual
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