Search results for "script"

showing 10 items of 5143 documents

Functional characterization of the plastidial 3-phosphoglycerate dehydrogenase family in Arabidopsis.

2013

This work contributes to unraveling the role of the phosphorylated pathway of serine (Ser) biosynthesis in Arabidopsis (Arabidopsis thaliana) by functionally characterizing genes coding for the first enzyme of this pathway, 3-phosphoglycerate dehydrogenase (PGDH). We identified two Arabidopsis plastid-localized PGDH genes (3-PGDH and EMBRYO SAC DEVELOPMENT ARREST9 [EDA9]) with a high percentage of amino acid identity with a previously identified PGDH. All three genes displayed a different expression pattern indicating that they are not functionally redundant. pgdh and 3-pgdh mutants presented no drastic visual phenotypes, but eda9 displayed delayed embryo development, leading to aborted emb…

PhysiologyMutantMolecular Sequence DataArabidopsisPlant SciencePlant RootsGene Expression Regulation EnzymologicSerineBiochemistry and MetabolismGene Expression Regulation PlantComplementary DNAArabidopsisGeneticsSerineArabidopsis thalianaMetabolomicsAmino Acid SequencePlastidsPhosphorylationGenePhosphoglycerate DehydrogenasePhylogenyTapetumMicroscopy ConfocalbiologySequence Homology Amino AcidArabidopsis ProteinsReverse Transcriptase Polymerase Chain ReactionGenetic Complementation Testfood and beveragesPlant Components Aerialbiology.organism_classificationPlants Genetically ModifiedPhenotypeIsoenzymesBiochemistryMultigene FamilyMutationSeedsPollenPlant physiology
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Xyloglucan endotransglucosylase/hydrolases (XTHs) during tomato fruit growth and ripening

2009

Abstract: Depolymerization of cell watt xyloglucan has been proposed to be involved in tomato fruit softening, along with the xyloglucan modifying enzymes. Xyloglucan endo-transgtucosylase/hydrolases (XTHs: EC 2.4.1.207 and/or EC 3.2.1.151) have been proposed to have a dual role integrating newly secreted xyloglucan chains into an existing watt-bound xyloglucan, or restructuring the existing cell watt material by catalyzing transglucosylation between previously wall-bound xyloglucan molecules. Here, 10 tomato (Solanum lycopersicum) SIXTHs were studied and grouped into three phylogenetic groups to determine which members of each family were expressed during fruit growth and fruit ripening, a…

PhysiologyPlant ScienceCell wallchemistry.chemical_compoundSolanum lycopersicumGene Expression Regulation PlantHemicelluloseBiologyPhylogenybiologyReverse Transcriptase Polymerase Chain ReactionComputational BiologyGlycosyltransferasesfood and beveragesPlant physiologyRipeningEthylenesXyloglucan endotransglucosylasebiology.organism_classificationXyloglucanHorticulturechemistryBiochemistryFruitSolanumAgronomy and Crop ScienceSolanaceaeJournal of Plant Physiology
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Identification of the Weevil immune genes and their expression in the bacteriome tissue

2008

Abstract Background Persistent infections with mutualistic intracellular bacteria (endosymbionts) are well represented in insects and are considered to be a driving force in evolution. However, while pathogenic relationships have been well studied over the last decades very little is known about the recognition of the endosymbionts by the host immune system and the mechanism that limits their infection to the bacteria-bearing host tissue (the bacteriome). Results To study bacteriome immune specificity, we first identified immune-relevant genes of the weevil Sitophilus zeamais by using suppressive subtractive hybridization (SSH) and then analyzed their full-length coding sequences obtained b…

PhysiologyPlant Scienceprotéines et peptides de signalisation intracellulaireStructural BiologyGene expressionlcsh:QH301-705.5Genetics0303 health sciencesAgricultural and Biological Sciences(all)EndosymbiosisReverse Transcriptase Polymerase Chain ReactionMicrobiology and ParasitologyIntracellular Signaling Peptides and ProteinsMicrobiologie et ParasitologielarveLarva1-1-1 Article périodique à comité de lectureInsect ProteinsGeneral Agricultural and Biological SciencesResearch ArticleBiotechnologyexpression géniquecharanconMolecular Sequence DatamuramidaseBiologyGeneral Biochemistry Genetics and Molecular BiologyMicrobiology03 medical and health sciencesAposymbioticcurculionidaeImmune systemEscherichia coliAnimalsGeneEcology Evolution Behavior and SystematicsAlphaproteobacteria030304 developmental biologyBiochemistry Genetics and Molecular Biology(all)030306 microbiologyTOLLIPIntracellular parasitefungiBacteriomeCell Biologybiochemical phenomena metabolism and nutritionGene Expression Regulationlcsh:Biology (General)WeevilsbacteriaCarrier ProteinsAntimicrobial Cationic Peptides[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisDevelopmental BiologyBMC Biology
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What Can Proteomics Tell Us About Platelets?

2014

More than 130 years ago, it was recognized that platelets are key mediators of hemostasis. Nowadays, it is established that platelets participate in additional physiological processes and contribute to the genesis and progression of cardiovascular diseases. Recent data indicate that the platelet proteome, defined as the complete set of expressed proteins, comprises >5000 proteins and is highly similar between different healthy individuals. Owing to their anucleate nature, platelets have limited protein synthesis. By implication, in patients experiencing platelet disorders, platelet (dys)function is almost completely attributable to alterations in protein expression and dynamic difference…

PhysiologyPlatelet disorderblood plateletsproteomeBlood ProteinsDiseaseBiologyProteomicsBioinformaticsbleedingcardiovascular diseasesproteomicsHemostasisImmunologyProteomeAnimalsHumansPlatelethemorrhageTranscriptomeCardiology and Cardiovascular MedicineHomeostasisFunction (biology)Signal TransductionCirculation Research
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Analysis of the Molecular Dialogue Between Gray Mold (Botrytis cinerea) and Grapevine (Vitis vinifera) Reveals a Clear Shift in Defense Mechanisms Du…

2015

Mature grapevine berries at the harvesting stage (MB) are very susceptible to the gray mold fungus Botrytis cinerea, while veraison berries (VB) are not. We conducted simultaneous microscopic and transcriptomic analyses of the pathogen and the host to investigate the infection process developed by B. cinerea on MB versus VB, and the plant defense mechanisms deployed to stop the fungus spreading. On the pathogen side, our genome-wide transcriptomic data revealed that B. cinerea genes upregulated during infection of MB are enriched in functional categories related to necrotrophy, such as degradation of the plant cell wall, proteolysis, membrane transport, reactive oxygen species (ROS) genera…

Physiology[SDV]Life Sciences [q-bio]Defence mechanismsVeraisonCell WallGene Expression Regulation PlantGene Expression Regulation FungalStilbenesPlant defense against herbivoryVitisPathogenComputingMilieux_MISCELLANEOUSDisease ResistanceOligonucleotide Array Sequence AnalysisBotrytis cinerea2. Zero hungerchemistry.chemical_classificationVirulencebiologyReverse Transcriptase Polymerase Chain ReactionPhytoalexinGene Expression Regulation Developmentalfood and beveragesGeneral MedicineSalicylatesPlant disease[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyHost-Pathogen Interactions[SDE]Environmental SciencesBotrytisSesquiterpenesPlant DiseaseVirulenceCyclopentanesMicrobiologyPhytoalexinsBotany[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyOxylipinsPlant DiseasesPhytopathologyGene Expression Profilingfungibiology.organism_classificationGene OntologychemistryResveratrolFruitReactive Oxygen SpeciesAgronomy and Crop Science[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Plant Occurring Flavonoids as Modulators of the Aryl Hydrocarbon Receptor

2021

International audience; The aryl hydrocarbon receptor (AhR) is a transcription factor deeply implicated in health and diseases. Historically identified as a sensor of xenobiotics and mainly toxic substances, AhR has recently become an emerging pharmacological target in cancer, immunology, inflammatory conditions, and aging. Multiple AhR ligands are recognized, with plant occurring flavonoids being the largest group of natural ligands of AhR in the human diet. The biological implications of the modulatory effects of flavonoids on AhR could be highlighted from a toxicological and environmental concern and for the possible pharmacological applicability. Overall, the possible AhR-mediated harmf…

PhytochemicalsPharmaceutical ScienceDioxin ReceptorReview[CHIM.THER]Chemical Sciences/Medicinal ChemistryPharmacologyFlavonesAnalytical Chemistryfunctional food03 medical and health scienceschemistry.chemical_compoundQD241-4410302 clinical medicineFlavonolsDrug DiscoveryAnimalsHumansxenobioticsPhysical and Theoretical ChemistryTranscription factorBeneficial effectstranscription factor030304 developmental biologychemistry.chemical_classificationFlavonoidsbioactive0303 health sciencesphytocompoundsbiologyfungiOrganic Chemistryfood and beveragesPolyphenolsdioxin receptorrespiratory systemIsoflavonesAryl hydrocarbon receptorIsoflavonesrespiratory tract diseases3. Good healthchemistryReceptors Aryl HydrocarbonChemistry (miscellaneous)030220 oncology & carcinogenesisAh receptorbiology.proteinMolecular MedicineXenobioticTranscription FactorsMolecules
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Phytoseiid mites from the Basilicata region (Southern Italy): species diversity and redescription of Typhloseiulus arzakanicus (Arutunjan) with a key…

2017

A survey of phytoseiid mites was carried out in the Basilicata region (Southern Italy) between 1976 and 2014 on wild and cultivated plants. A total of 38 species belonging to eleven genera and two subgenera were found on 59 plant species. The most common species was Euseius finlandicus (Oudemans) (39%) followed by Typhlodromus (Typhlodromus) exhilaratus Ragusa (32.2%), Kampimodromus aberrans (Oudemans) (27.1%), Typhlodromus (Anthoseius) cryptus (Athias-Henriot) (23.7%). Typhloseiulus arzakanicus (Arutunjan), found for first time in Italy, is redescribed here, while the male of this species is described for the first time. A dichotomic key of the species belonging to the genus Typhloseiulus …

Phytoseiidae; Basilicata; Italy; Typhloseiulus arzakanicus; redescription; dichotomic keySettore AGR/11 - Entomologia Generale E ApplicataItalyredescriptionTyphloseiulus arzakanicuBasilicataPhytoseiidaedichotomic key
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Protective effect of apocynin in a mouse model of chemically-induced colitis.

2013

Apocynin, a constituent of Picrorhiza kurroa, successfully inhibits NADPH oxidase and shows promise as an anti-inflammatory drug. Now, we report anti-inflammatory effects of apocynin in an experimental colitis model induced by dextran sulfate sodium as well as the effects on the mediators involved in this process. Apocynin reduced the colitis induced in mice by administration of 5 % dextran sulfate sodium during 7 days. Mice were fed a control diet or a diet supplemented with 2 % of apocynin or 2 % of rutin. Sulfasalazine (50 mg/kg, p. o.) was used as a positive control. Treatment with apocynin and rutin ameliorated the course of colonic inflammation with results similar to those of the ref…

Picrorhiza kurroaRutinAnti-Inflammatory AgentsPharmaceutical ScienceNitric Oxide Synthase Type IIPharmacologyInflammatory bowel diseaseAnalytical Chemistrychemistry.chemical_compoundRutinMiceDrug DiscoveryPicrorhizaNADPH oxidasebiologyDextran SulfateColitisBiochemistrycardiovascular systemMolecular Medicinecirculatory and respiratory physiologymedicine.druginorganic chemicalsSTAT3 Transcription FactorColonNitric OxideDinoprostoneNitric oxideSulfasalazinemedicineAnimalscardiovascular diseasesColitisPharmacologyCyclooxygenase 2 Inhibitorsbusiness.industryPlant ExtractsOrganic ChemistryTranscription Factor RelAAcetophenonesmedicine.diseaseSulfasalazineDisease Models AnimalchemistryComplementary and alternative medicineCyclooxygenase 2Apocyninbiology.proteinbusinessPhytotherapyPlanta medica
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In Search of Pathogens: Transcriptome-Based Identification of Viral Sequences from the Pine Processionary Moth (Thaumetopoea pityocampa)

2015

Thaumetopoea pityocampa (pine processionary moth) is one of the most important pine pests in the forests of Mediterranean countries, Central Europe, the Middle East and North Africa. Apart from causing significant damage to pinewoods, T. pityocampa occurrence is also an issue for public and animal health, as it is responsible for dermatological reactions in humans and animals by contact with its irritating hairs. High throughput sequencing technologies have allowed the fast and cost-effective generation of genetic information of interest to understand different biological aspects of non-model organisms as well as the identification of potential pathogens. Using these technologies, we have o…

Pine processionary mothPPMCypovirusGenes ViralTurkeylcsh:QR1-502Biological pest controlZoologyMothsBiologyArticlelcsh:MicrobiologyDNA sequencingTranscriptomesTranscriptomecypovirusPhylogeneticsVirologyiflavirusAnimalsPhylogenyIllumina dye sequencingLarvaIflavirusEcologyComputational BiologyHigh-Throughput Nucleotide SequencingMolecular Sequence AnnotationRhabdovirusPinuspine processionary mothInfectious DiseasesLarvaViruses<i>Thaumatopoea pityocampa</i>Identification (biology)Thaumatopoea pityocampaIntegumentrhabdovirustranscriptomeViruses
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Transcriptomic Analysis of the Pistacia vera (L.) Fruits Enable the Identification of Genes and Hormone-Related Gene Linked to Inflorescence Bud Absc…

2021

Pistacia vera (L.) is an alternate bearing species. The tree produces axillary inflorescence buds every year. Still, they abscise in &ldquo;ON&rdquo; overloaded shoots, causing a limited production in the following &ldquo;OFF&rdquo; year, causing a significant and unfavorable production fluctuation. In this work, we carried out de novo discovery and transcriptomic analysis in fruits of &ldquo;ON&rdquo; and &ldquo;OFF&rdquo; shoots of the cultivar Bianca. We also investigated whether the fruit signaling pathway and hormone biosynthesis directly or indirectly linked to the premature fall of the inflorescence buds causing alternate bearing. We identified 1536 differentially expressed genes (DE…

Pistacia vera<i>Pistacia vera</i>; alternate bearing; differentially expressed genes DEGs; hormones; flower bud abscissionhormonesDifferentially expressed genes DEGfood and beveragesFlowersQH426-470HormoneArticleSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboreepistachio genes abscission fruitsalternate bearingdifferentially expressed genes DEGsPlant Growth RegulatorsGene Expression Regulation PlantFruitPistacia<i>Pistacia vera</i>GeneticsInflorescenceflower bud abscissionTranscriptomeGenetics (clinical)Plant ProteinsGenes
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