Search results for "sediments"
showing 10 items of 246 documents
Bacterial communities in sediment of a Mediterranean marine protected area
2017
Biodiversity is crucial in preservation of ecosystems, and bacterial communities play an indispensable role for the functioning of marine ecosystems. The Mediterranean marine protected area (MPA) “Capo Gallo–Isola delle Femmine” was instituted to preserve marine biodiversity. The bacterial diversity associated with MPA sediment was compared with that from sediment of an adjacent harbour exposed to intense nautical traffic. The MPA sediment showed higher diversity with respect to the impacted site. A 16S rDNA clone library of the MPA sediment allowed the identification of 7 phyla: Proteobacteria (78%), Firmicutes (11%), Acidobacteria (3%), Actinobacteria (3%), Bacteroidetes (2%), Planctomyc…
Human-Driven Microbiological Contamination of Benthic and Hyporheic Sediments of an Intermittent Peri-Urban River Assessed from MST and 16S rRNA Gene…
2017
International audience; Rivers are often challenged by fecal contaminations. The barrier effect of sediments against fecal bacteria was investigated through the use of a microbial source tracking (MST) toolbox, and by Next Generation Sequencing (NGS) of V5-V6 16S rRNA gene (rrs) sequences. Non-metric multi-dimensional scaling analysis of V5-V6 16S rRNA gene sequences differentiated bacteriomes according to their compartment of origin i.e., surface water against benthic and hyporheic sediments. Classification of these reads showed the most prevalent operating taxonomic units (OTU) to be allocated to Flavobacterium and Aquabacterium. Relative numbers of Gaiella, Haliangium, and Thermoleophilu…
Assessing the effect of mercury pollution on cultured benthic foraminifera community using morphological and eDNA metabarcoding approaches
2018
Mercury (Hg) is a highly toxic element for living organisms and is known to bioaccumulate and biomagnify. Here, we analyze the response of benthic foraminifera communities cultured in mesocosm and exposed to different concentrations of Hg. Standard morphological analyses and environmental DNA metabarcoding show evidence that Hg pollution has detrimental effects on benthic foraminifera. The molecular analysis provides a more complete view of foraminiferal communities including the soft-walled single-chambered monothalamiids and small-sized hard-shelled rotaliids and textulariids than the morphological one. Among these taxa that are typically overlooked in morphological studies we found poten…
The essentials of marine biotechnology
2021
Coastal countries have traditionally relied on the existing marine resources (e.g., fishing, food, transport, recreation, and tourism) as well as tried to support new economic endeavors (ocean energy, desalination for water supply, and seabed mining). Modern societies and lifestyle resulted in an increased demand for dietary diversity, better health and well-being, new biomedicines, natural cosmeceuticals, environmental conservation, and sustainable energy sources. These societal needs stimulated the interest of researchers on the diverse and underexplored marine environments as promising and sustainable sources of biomolecules and biomass, and they are addressed by the emerging field of ma…
Holocene treeline in the northern Andes (Ecuador): new evidence from soil charcoals
2006
Soil charcoals represent a record for palaeoecological studies. For the first time pedoanthracology is applied to northern Andes of Ecuador to study the Holocene treeline. The first results show that the upper treeline was lower than today in the late Pleistocene and in the Middle Holocene. A wide amount of charcoals dated ca. 13000 cal. yr. BP could be caused by fires linked to the first presence of man at these altitudes.
Assessing the influence of confounding biological factors when estimating bioaccumulation of PCBs with passive samplers in aquatic ecosystems
2017
Passive samplers are promising surrogates for organisms, mimicking bioaccumulation. However, several biological characteristics disturb the passive partitioning process in organisms by accelerating or restraining bioaccumulation, resulting in species-specific body residues of hydrophobic organic contaminants (HOCs). In addition to site-specific characteristics and HOC concentrations, age, sex, diet, biotransformation capability and habitat-specific characteristics may affect body residues. Two passive sampler types, polyethylene (PE) and polydimethylsiloxane (PDMS) were deployed in a PCB-contaminated freshwater lake water and sediment, respectively, to assess their bioaccumulation predictio…
Polycyclic aromatic hydrocarbons and trace metal contamination of coastal sediment and biota from Togo
2011
The state of contamination of tropical environments, particularly in Africa, remains a relatively under explored subject. Here, we determined polycyclic aromatic hydrocarbon (PAH) and trace metal concentrations in coastal sediment and biota samples (fish and mussels) from Togo (West Africa). In the sediments, the ∑21 PAH concentrations ranged from4 ng g(-1) to 257 ng g(-1), averaging 92 ng g(-1). Concentration ratios of low molecular weight PAHs (2-3 rings) versus high molecular weight PAHs (≥4 rings) were always lower than 1 (ranging from 0.08 to 0.46) indicating that high molecular weight PAHs were dominant in all sediment samples, and that PAHs originated mainly from anthropogenic combus…
Sulfur isotope's signal of nanopyrites enclosed in 2.7 Ga stromatolitic organic remains reveal microbial sulfate reduction.
2018
18 pages; International audience; Microbial sulfate reduction (MSR) is thought to have operated very early on Earth and is often invoked to explain the occurrence of sedimentary sulfides in the rock record. Sedimentary sulfides can also form from sulfides produced abiotically during late diagenesis or metamorphism. As both biotic and abiotic processes contribute to the bulk of sedimentary sulfides, tracing back the original microbial signature from the earliest Earth record is challenging. We present in situ sulfur isotope data from nanopyrites occurring in carbonaceous remains lining the domical shape of stromatolite knobs of the 2.7-Gyr-old Tumbiana Formation (Western Australia). The anal…
OSL dating of Middle Weichselian age shallow basin sediments in Western Latvia, Eastern Baltic
2012
Abstract This paper presents the results of the first attempt to date the Quaternary sediments of western Latvia in the southeast Baltic region, using luminescence. The analyses have been carried out on sandy sediments of the Jurkalne Formation that are located between upper and lower Scandinavian sourced tills. Previous publications on the origin of the Quaternary sediments in the region are reviewed and it is found that there are a wide range of explanations for their processes of formation and their age of formation. It is concluded that although the sandy sediments were deposited in freshwater environment although they contain both marine and freshwater fauna and flora, a property that …
Investigating the influence of climate changes on rodent communities at a regional-scale (MIS 1-3, southwestern France).
2016
25 pages; International audience; Terrestrial ecosystems have continuously evolved throughout the Late Pleistocene and theHolocene, deeply affected by both progressive environmental and climatic modifications, aswell as by abrupt and large climatic changes such as the Heinrich or Dansgaard-Oeschgerevents. Yet, the impacts of these different events on terrestrial mammalian communities arepoorly known, as is the role played by potential refugia on geographical species distributions.This study examines community changes in rodents of southwestern France between50 and 10 ky BP by integrating 94 dated faunal assemblages coming from 37 archaeologicalsites. This work reveals that faunal distributi…