Search results for "sequence"

Medical Data Mining for Heart Diseases and the Future of Sequential Mining in Medical Field

2018

Data Mining in general is the act of extracting interesting patterns and discovering non-trivial knowledge from a large amount of data. Medical data mining can be used to understand the events happened in the past, i.e. studying a patients vital signs to understand his complications and discover why he has died, or to predict the future by analyzing the events that had happened. In this chapter we are presenting an overview on studies that use data mining to predict heart failure and heart diseases classes. We will also focus on one of the trendiest data-mining field, namely the Sequential Mining, which is a very promising paradigm. Due to its important results in many fields, this chapter …

Overview on Sequential Mining Algorithms and Their Extensions

2018

The main purpose of data mining is to extract hidden, important and nontrivial information from a database. Sequential Pattern Mining is a data mining technique that aims to obtain and analyze frequent subsequences from sequences of events or items with or without time constraint. The importance of a sequence can be measured based on different factors such as the frequency of their occurrence, their length and also their profit. The pattern mining or the discovery of important and unexpected patterns and information was first introduced in 1990 with the well-known Apriori algorithm. Then, and after many studies on frequent pattern mining, a new approach appeared: Sequential Pattern Mining. …

Diversification of CYCLOIDEA-like TCP genes in the basal eudicot families Fumariaceae and Papaveraceae s.str.

2006

CYCLOIDEA-like genes belong to the TCP family of transcriptional regulators and have been shown to control different aspects of shoot development in various angiosperm lineages, including flower monosymmetry in asterids and axillary meristem growth in monocots. Genes related to the CYC gene from ANTIRRHINUM show independent duplications in both asterids and rosids. However, it remains unclear to what extent this affected the evolution of flower symmetry and shoot branching in these and other eudicot lineages. Here, we show that CYC-like genes have also undergone duplications in two related Ranunculales families, Fumariaceae and Papaveraceae s.str. These families exhibit morphological divers…

Comparison of global responses to mild deficiency and excess copper levels in Arabidopsis seedlings

2013

[EN] Copper is an essential micronutrient in higher plants, but it is toxic in excess. The fine adjustments required to fit copper nutritional demands for optimal growth are illustrated by the diverse, severe symptoms resulting from copper deficiency and excess. Here, a differential transcriptomic analysis was done between Arabidopsis thaliana plants suffering from mild copper deficiency and those with a slight copper excess. The effects on the genes encoding cuproproteins or copper homeostasis factors were included in a CuAt database, which was organised to collect additional information and connections to other databases. The categories overrepresented under copper deficiency and copper e…

Israeli spotted fever Rickettsia in Sicilian Rhipicephalus sanguineus ticks [6]

2003

Related haloarchaeal pleomorphic viruses contain different genome types

2012

Archaeal viruses have been the subject of recent interest due to the diversity discovered in their virion architectures. Recently, a new group of haloarchaeal pleomorphic viruses has been discovered. It is distinctive in terms of the virion morphology and different genome types (ssDNA/dsDNA) harboured by rather closely related representatives. To date there are seven isolated viruses belonging to this group. Most of these share a cluster of five conserved genes, two of which encode major structural proteins. Putative proviruses and proviral remnants containing homologues of the conserved gene cluster were also identified suggesting a long-standing relationship of these viruses with their ho…

A Unique Group of Virus-Related, Genome-Integrating Elements Found Solely in the Bacterial Family Thermaceae and the Archaeal Family Halobacteriaceae

2010

ABSTRACT Viruses SH1 and P23-77, infecting archaeal Haloarcula species and bacterial Thermus species, respectively, were recently designated to form a novel viral lineage. In this study, the lineage is expanded to archaeal Halomicrobium and bacterial Meiothermus species by analysis of five genome-integrated elements that share the core genes with these viruses.

Rectilinear evolution in arvicoline rodents and numerical dating of Iberian Early Pleistocene sites

2014

Abstract Lozano-Fernandez et al. (2013a) have recently published a method intended for numerical dating of Early Pleistocene sites, which is based on the assumption of uniform, constant rate increase through time of mean lower molar tooth length of water voles ( Mimomys savini ) in a number of levels sampled in the stratigraphic sequence of Atapuerca TD site. They suggest that the regression equation obtained in this local section for site chronology on tooth size could be useful for estimating the numerical age of other localities from southwestern Europe. However, in our opinion this biostratigraphic approach has severe conceptual and methodological problems, which discourage its use as a…

mtDNA analysis of the human remains buried in the sarcophagus of Federico II

2005

Abstract The sarcophagus containing the remains of Federico II, located in the Cathedral of Palermo (Sicily, Italy), was opened on 1998 to perform a multidisciplinary survey [1]. Next to the remains of Federico II and in close contact with them were laying two other skeletons belonging, according to historical records, to Pietro II di Aragona and to an anonymous person (“The Third Individual”), probably a woman. The bones appeared severely deteriorated. Chemical analysis performed on bone samples excluded that the bodies underwent some kind of embalming process. The analysis of mtDNA from bone samples taken from the three skeletons was successful in only one of the two labs involved. The HV…

Climate fluctuations and trajectories to complexity in the neolithic: towards a theory:

2009

Theories about the emergence and spread of farming in western Eurasia have a long research history. Occasionally, climate fluctuations have served as explanations for short-term culture change. However, the entire Holocene climate fluctuation sequence has so far not been regarded. First steps towards a theory which combines the successive stages in Neolithization and early to Mid-Holocene climate fluctuations are described.