Search results for "shift"

showing 10 items of 1226 documents

An ab initio study of the relation between NMR chemical shifts and solid-state structures: hexabenzocoronene derivatives

2000

The assignment of solid-state NMR spectra is studied by the use of model systems computed with ab initio methods. The investigated system is a hexabenzocoronene derivative, for which a T-like arrangement of dimer units is found in the solid-state structure. Here, a tetramer model is required to explain the intermolecular interactions influencing the spectrum, whereas a dimer model is found to be inadequate. For the tetramer model, agreement of the computed NMR spectrum with the experimental solid-state magic angle spinning MAS-NMR data is observed. This study implies that the combination of experimental NMR data with quantum chemical calculations can be employed as a useful tool in determin…

Carbon-13 NMR satelliteChemical shiftIntermolecular forceAb initioGeneral Physics and AstronomyNuclear magnetic resonance spectroscopyNMR spectra databaseCrystallographychemistry.chemical_compoundHexabenzocoronenechemistryPhysics::Atomic and Molecular ClustersMagic angle spinningCondensed Matter::Strongly Correlated ElectronsPhysical and Theoretical ChemistryPhysical Chemistry Chemical Physics
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Phenolic Acid-Mediated Regulation of the padC Gene, Encoding the Phenolic Acid Decarboxylase of Bacillus subtilis

2008

ABSTRACT In Bacillus subtilis , several phenolic acids specifically induce expression of padC , encoding a phenolic acid decarboxylase that converts these antimicrobial compounds into vinyl derivatives. padC forms an operon with a putative coding sequence of unknown function, yveFG , and this coding sequence does not appear to be involved in the phenolic acid stress response (PASR). To identify putative regulators involved in the PASR, random transposon mutagenesis, combined with two different screens, was performed. PadR, a negative transcriptional regulator of padC expression, was identified. padR is not located in the vicinity of padC , and the expression of padR is low and appears const…

Carboxy-lyasesCarboxy-LyasesOperonMolecular Sequence DataElectrophoretic Mobility Shift AssayBacillus subtilisBiologyMicrobiologyGene Expression Regulation Enzymologic03 medical and health scienceschemistry.chemical_compoundBacterial ProteinsHydroxybenzoatesGene RegulationElectrophoretic mobility shift assay[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequenceMolecular Biology030304 developmental biologychemistry.chemical_classification0303 health sciencesBase Sequence030306 microbiologyEffectorGene Expression Regulation BacterialPhenolic acidbiology.organism_classificationMolecular biologyRepressor ProteinsEnzymechemistryBiochemistryTransposon mutagenesisBacillus subtilis
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A Colorimetric Probe for the Selective Detection of Norepinephrine Based on a Double Molecular Recognition with Functionalized Gold Nanoparticles

2019

[EN] A simple colorimetric probe for the selective and sensitive detection of neurotransmitter norepinephrine (NE), an important biomarker in the detection of tumors such as pheochromocytoma and paraganglioma, is described. The sensing strategy is based on the use of spherical gold nanoparticles functionalized with benzaldehyde and boronic acid-terminated moieties. A double molecular recognition involving on one hand the aromatic aldehyde and the aminoalcohol group of NE, and on the other hand the boronic acid and the catechol moiety of the neurotransmitter, results in analyte triggered aggregation of the gold nanoparticles, leading to a bathochromic shift of the SPR band in the UV-vis spec…

CatecholChemistryQUIMICA INORGANICANeurotransmittersGlutamic acidCombinatorial chemistryBenzaldehydeAggregationchemistry.chemical_compoundQUIMICA ORGANICAMolecular recognitionColloidal goldBathochromic shiftGold nanoparticlesMoietyGeneral Materials ScienceNorepinephrine (NE)Colorimetric detectionBoronic acidACS Applied Nano Materials
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An unconventional role for miRNA: let-7 activates Toll-like receptor 7 and causes neurodegeneration

2011

Activation of innate immune receptors by host-derived factors exacerbates CNS damage, but the identity of these factors remains elusive. We uncovered an unconventional role for the microRNA let-7, a highly abundant regulator of gene expression in the CNS, in which extracellular let-7 activates the RNA-sensing Toll-like receptor (TLR) 7 and induces neurodegeneration through neuronal TLR7. Cerebrospinal fluid (CSF) from individuals with Alzheimer’s disease contains increased amounts of let-7b, and extracellular introduction of let-7b into the CSF of wild-type mice by intrathecal injection resulted in neurodegeneration. Mice lacking TLR7 were resistant to this neurodegenerative effect, but thi…

Cell signalingApoptosisElectrophoretic Mobility Shift AssayBiologyReal-Time Polymerase Chain ReactionMiceAlzheimer DiseasemicroRNAExtracellularmedicineAnimalsHumansReceptorIn Situ HybridizationMice KnockoutNeuronsToll-like receptorMembrane GlycoproteinsMicroscopy ConfocalInnate immune systemGeneral NeuroscienceNeurodegenerationBrainvirus diseasesTLR7medicine.diseaseImmunohistochemistryMice Inbred C57BLMicroRNAsHEK293 CellsToll-Like Receptor 7Nerve DegenerationCancer researchSignal TransductionNature Neuroscience
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Social Simulation Based on Cellular Automata: Modeling Language Shifts

2011

Nowadays, language shifts (i.e., a community of speakers stops using their traditional language and speaks a new one in all communication settings) may produce a massive extinction of languages throughout the world. In this context, an important task for social sciences research should therefore be to achieve a deep comprehension of language shifts. However, modeling the social and behavioral variables that guide the social behavior of individuals and groups has traditionally been tricky in all the social sciences. In this situation, social simulation provides a tool for testing hypotheses and building models of social phenomena (see, for example, Gilbert, 1996; Gilbert & Toitzsch, 2005; an…

Cellular automataSocial psychology (sociology)Theoretical computer scienceModeling languageComputer scienceField (Bourdieu)Context (language use)Cellular automatonAutomatonSimulation methodsSociologiaLanguage shiftAutòmats cel·lularsSociologyMètodes de simulacióSocial simulation
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E-2-Benzylidenebenzocycloalkanones. IV. Studies on transmission of substituent effects on 13C NMR chemical shifts of E-2-(X-benzylidene)-1-tetralones…

2005

Abstract Single substituent parameter (SSP) and dual substituent parameter (DSP) analyses were applied to study the transmission of substituent effects on selected 13C NMR chemical shifts of the cyclic chalcone analogues, E-2-(4′-X-benzylidene)-1-tetralones (2) and E-2-(4′-X-benzylidene)-1-benzosuberones (3). In order to study how the geometry of the cyclic chalcone analogues affects the transmission of substituent effects similar investigations with the respective chalcones (4) were also performed. The results obtained earlier with the five-membered analogue E-2-(4′-X-benzylidene)-1-indanones (1) were also involved in the comparisons. Geometry optimization of the unsubstituted 1a, 2a, 3a a…

ChalconeStereochemistryChemical shiftOrganic ChemistrySubstituentAb initioCarbon-13 NMRResonance (chemistry)Analytical ChemistryInorganic Chemistrychemistry.chemical_compoundchemistryComputational chemistryEnoneSpectroscopyTetralonesJournal of Molecular Structure
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NMR chemical shift computations at second-order Møller-Plesset perturbation theory using gauge-including atomic orbitals and Cholesky-decomposed two-…

2021

We report on a formulation and implementation of a scheme to compute NMR shieldings at second-order Moller-Plesset (MP2) perturbation theory using gauge-including atomic orbitals (GIAOs) to ensure gauge-origin independence and Cholesky decomposition (CD) to handle unperturbed as well as perturbed two-electron integrals. We investigate the accuracy of the CD for the derivatives of the two-electron integrals with respect to an external magnetic field as well as for the computed NMR shieldings, before we illustrate the applicability of our CD based GIAO-MP2 scheme in calculations involving up to about one hundred atoms and more than one thousand basis functions.

Chemical Physics (physics.chem-ph)PhysicsChemical shiftMøller–Plesset perturbation theoryFOS: Physical sciencesGeneral Physics and AstronomyBasis functionElectronMagnetic fieldAtomic orbitalQuantum mechanicsPhysics::Atomic and Molecular ClustersPhysical and Theoretical ChemistryPerturbation theoryCholesky decompositionThe Journal of chemical physics
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Measuring molecular parity nonconservation using nuclear-magnetic-resonance spectroscopy

2017

The weak interaction does not conserve parity and therefore induces energy shifts in chiral enantiomers that should in principle be detectable in molecular spectra. Unfortunately, the magnitude of the expected shifts are small and in spectra of a mixture of enantiomers, the energy shifts are not resolvable. We propose a nuclear magnetic resonance (NMR) experiment in which we titrate the chirality (enantiomeric excess) of a solvent and measure the diasteriomeric splitting in the spectra of a chiral solute in order to search for an anomalous offset due to parity nonconservation (PNC). We present a proof-of-principle experiment in which we search for PNC in the \textsuperscript{13}C resonances…

Chemical Physics (physics.chem-ph)PhysicsGeneral PhysicsChemical shiftphysics.chem-phFOS: Physical sciencesParity (physics)Nuclear magnetic resonance spectroscopyWeak interaction010402 general chemistry01 natural sciencesSpectral lineMathematical Sciences0104 chemical sciences3. Good healthPhysics - Chemical Physics0103 physical sciencesPhysical SciencesChemical SciencesPhysics::Atomic PhysicsAtomic physicsEnantiomer010306 general physicsEnantiomeric excessChirality (chemistry)
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13C NMR study on the methoxy carbon chemical shifts in chloro-substituted anisoles and guaiacols

1983

The 13C NMR chemical shifts of methoxy carbons in chlorinated anisoles and guaiacols have been measured for acetone-d6 solutions. Multiple linear regression analysis, and also ‘simple sum rule’ calculations, have been used to estimate the effects of the chlorine atoms (the position and degree of substitution) on the chemical shifts. The most important effects have shown to be due to the chlorine atoms adjacent to the methoxy and hydroxy substituents. For chlorinated guaiacols, the greatest effect is due to the chlorine atom adjacent to the methoxy group. For chlorinated anisoles, the substituents adjacent to the methoxy group (2,6-disubstitution) cause large effects. For both groups of comp…

Chemical shiftChlorine atomSubstituentchemistry.chemical_elementGeneral ChemistryCarbon-13 NMRPhotochemistryMedicinal chemistrychemistry.chemical_compoundDegree of substitutionchemistrypolycyclic compoundsChlorineGeneral Materials ScienceMultiple linear regression analysisCarbonOrganic Magnetic Resonance
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Molecular precursors of mesostructured silica materials in the atrane route: A DFT/GIAO/NBO theoretical study

2007

Abstract Quantum chemical calculations using density functional theory have been carried out to investigate two assumed molecular precursors and identified as silatranes (N[OCH2CH2]3Si–OCH2CH2N–(CH2CH2OH)2 and N[OCH2CH2]3Si–OCH2CH2N–(CH2CH2OH)2Na+) which are present in the synthesis of mesoporous silica based material namely “the atrane route”. One of the ways in this synthesis leads to the well-known MCM-41. Additionally, in this work has been also investigated two others molecules such as triethanolamine (TEAH3) and sodatrane which are present in the medium. Gas phase and solution equilibrium geometries of the previous molecules were fully optimized at B3LYP level, modeling solvent effect…

Chemical shiftCondensed Matter PhysicsBiochemistrychemistry.chemical_compoundSolvation shellAtranechemistryComputational chemistryMoleculeDensity functional theoryPhysical and Theoretical ChemistrySolvent effectsBasis setNatural bond orbitalJournal of Molecular Structure: THEOCHEM
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