Search results for "sign"

showing 10 items of 14733 documents

RCD1 Coordinates Chloroplastic and Mitochondrial Electron Transfer through Interaction with ANAC Transcription Factors in Arabidopsis

2018

AbstractSignaling from chloroplasts and mitochondria, both dependent on reactive oxygen species (ROS), merge at the nuclear protein RADICAL-INDUCED CELL DEATH1 (RCD1). ROS produced in the chloroplasts affect the abundance, thiol redox state and oligomerization of RCD1. RCD1 directly interactsin vivowith ANAC013 and ANAC017 transcription factors, which are the mediators of the ROS-related mitochondrial complex III retrograde signa and suppresses activity of ANAC013 and ANAC017. Inactivation ofRCD1leads to increased expression of ANAC013 and ANAC017-regulated genes belonging to the mitochondrial dysfunction stimulon (MDS), including genes for mitochondrial alternative oxidases(AOXs).Accumulat…

0106 biological scienceschemistry.chemical_classification0303 health sciencesReactive oxygen speciesNuclear genebiologyfood and beveragesMitochondrionbiology.organism_classification01 natural sciencesCell biologyChloroplast03 medical and health scienceschemistryArabidopsisRetrograde signalingNuclear proteinTranscription factor030304 developmental biology010606 plant biology & botany
researchProduct

Nitric Oxide Signalling in Plants: Cross-Talk With Ca2+, Protein Kinases and Reactive Oxygen Species

2010

International audience; Nitric oxide (NO) is a gaseous free radical recognized as a ubiquitous signal transducer that contributes to various biological processes in animals. It exerts most of its effects by regulating the activities of various proteins including Ca2+ channels, protein kinases and transcription factors. In plants, studies conducted over the past ten years revealed that NO also functions as an endogenous mediator in diverse physiological processes ranging from root development to stomatal closure. Its biological role as an intracellular plant messenger molecule, however, remains poorly understood. Here, we review the molecular basis of NO signaling in animals and discuss curr…

0106 biological scienceschemistry.chemical_classification[ SDV.BV ] Life Sciences [q-bio]/Vegetal Biology0303 health sciencesProgrammed cell deathReactive oxygen speciesKinaseEndogenous mediator01 natural sciencesNitric oxideCell biology03 medical and health scienceschemistry.chemical_compoundchemistry[SDV.BV]Life Sciences [q-bio]/Vegetal BiologySignal transductionTranscription factorIntracellular030304 developmental biology010606 plant biology & botany
researchProduct

Context-dependent coloration of prey and predator decision making in contrasting light environments

2022

A big question in behavioral ecology is what drives diversity of color signals. One possible explanation is that environmental conditions, such as light environment, may alter visual signaling of prey, which could affect predator decision-making. Here, we tested the context-dependent predator selection on prey coloration. In the first experiment, we tested detectability of artificial visual stimuli to blue tits (Cyanistes caeruleus) by manipulating stimulus luminance and chromatic context of the background. We expected the presence of the chromatic context to facilitate faster target detection. As expected, blue tits found targets on chromatic yellow background faster than on achromatic gre…

0106 biological sciencescognitionvaroitusväriRECEIVER PSYCHOLOGYAVOIDANCEContext (language use)Biologypsychology010603 evolutionary biology01 natural scienceseläinten käyttäytyminentäpläsiilikäsPredation03 medical and health sciencesreceptor-noise-limited modelPredatorsinitiainenEcology Evolution Behavior and Systematics030304 developmental biology0303 health sciencesSENSORY DRIVEEcologybehaviorMOTH15. Life on landLUMINANCEnäköPOLYMORPHISMsaalistusVISIONBIRDcolor vision1181 Ecology evolutionary biologyAnimal Science and ZoologyWARNING SIGNALSsignal
researchProduct

Fruit body based inventories in wood-inhabiting fungi: Should we replicate in space or time?

2016

We assessed the effect of survey design on the results when conducting fruit body surveys of wood-inhabiting fungi. Our results demonstrate that the optimal design depends on the ecological question to be addressed, as well as the group of fungal species under research. If the aim is to record the total species richness in a dead wood unit or to estimate the population size of a species, repeating the survey over time is generally necessary. However, if the aim is to estimate the total species richness in the forest or to assess how environmental covariates influence species richness or community composition, it is generally more efficient to increase the number of dead wood units than to r…

0106 biological sciencesdata collectiontemporal autocorrelationDead woodPlant ScienceBiologyspatial autocorrelation010603 evolutionary biology01 natural sciencesstudy designPolyporalesSpatial analysisEcology Evolution Behavior and SystematicsEcologysampling methodEcologyEcological ModelingPopulation sizeSurvey researchReplicate15. Life on landbiology.organism_classificationwood-decaying fungiCommunity compositionpolyporalesta1181Species richnessfungal community010606 plant biology & botanyFungal Ecology
researchProduct

Non-linear biological responses to disturbance: consequences on population dynamics

2003

Abstract We assessed how non-linear biological responses to environmental noise, or “noise filtering”, impact the spectra of density-dependent population dynamics, and the correlation between noise and population dynamics. The noise was assumed to affect population growth rate in a discrete-time population model by Hassell [J. Anim. Ecol. 44 (1975) 283–295] where the population growth rate was linked to the environment with an optimum type filter. When compared to unfiltered noise, the filtered noise can distort the stationary distribution of population values. The optimum type filter can make cyclic population dynamics more regular and low population values can become more frequent or rare…

0106 biological scienceseducation.field_of_study010604 marine biology & hydrobiologyEcological ModelingPopulation sizePopulationFilter (signal processing)010603 evolutionary biology01 natural sciencesPopulation densityDensity dependencePopulation modelStatisticsQuantitative Biology::Populations and EvolutionPopulation growtheducationEnvironmental noiseMathematicsEcological Modelling
researchProduct

Is the impact of environmental noise visible in the dynamics of age-structured populations?

2001

Climate change has ignited lively research into its impact on various population–level processes. The research agenda in ecology says that some of the fluctuations in population size are accountable for by the external noise (e.g. weather) modulating the dynamics of populations. We obeyed the agenda by assuming population growth after a resource–limited Leslie matrix model in an age–structured population. The renewal process was disturbed by superimposing noise on the development of numbers in one or several age groups. We constructed models for iteroparous and semelparous breeders so that, for both categories, the population growth rate was matching. We analysed how the modulated populatio…

0106 biological scienceseducation.field_of_studyDisturbance (geology)General Immunology and MicrobiologyNoise (signal processing)010604 marine biology & hydrobiologyPopulation sizePopulationGeneral MedicineLeslie matrix010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyGeographyPopulation growthGeneral Agricultural and Biological SciencesEnvironmental noiseeducationSemelparity and iteroparityGeneral Environmental ScienceDemographyProceedings of the Royal Society of London. Series B: Biological Sciences
researchProduct

Demographic responses to protection from harvesting in a long-lived marine species

2021

Abstract Marine protected areas (MPAs) are usually considered to have positive effects on the recovery of over-exploited populations. However, resolving the extent to which MPAs function according to their conservation goals requires that essential demographic information such as individual survival and population size are quantified. To this end, we analyzed a 16-year replicated mark-recapture study on European lobster (Homarus gammarus, n = 8793) conducted at several protected and unprotected sites in southern Norway, quantifying the impact of MPAs on local population dynamics by means of a “before-after control-impact” study approach (BACI). Lobster survival and abundance were estimated …

0106 biological scienceseducation.field_of_studybiologyRange (biology)010604 marine biology & hydrobiologyPopulation sizePopulationfungiVDP::Matematikk og Naturvitenskap: 400biology.organism_classification010603 evolutionary biology01 natural sciencesMarine speciesFisheryRobust designHomarus gammarusAbundance (ecology)Marine protected areaeducationEcology Evolution Behavior and SystematicsNature and Landscape Conservation
researchProduct

The fungal elicitor cryptogein induces cell wall modifications on tobacco cell suspension

2000

Upon addition of the fungal elicitor cryptogein, suspension cells of tobacco (Nicotiana tabacum cv. Xanthi) aggregated in clusters. Cytochemical experiments indicated that elicited cells displayed fibrillar expansions of pectin along the primary cell wall. Immunocytochemical detection of pectin epitopes indicated that the fibrillar material surrounding the treated cells was mostly composed of low methylated galacturonan sequences, but the use of the cationic probe did not reveal the presence of negatively charged carboxyl groups: the presence of important amounts of calcium ions in these pectic fibrillar expansions accounts for these observations. These data indicate that tobacco cells trea…

0106 biological sciencesfood.ingredientPectinPhysiologyNicotiana tabacumchemistry.chemical_elementPlant ScienceCalcium01 natural sciences[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/BotanicsCell wallFungal Proteins03 medical and health sciencesfoodCell WallTobaccoCells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesbiologyAlgal Proteins[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanicsbiology.organism_classificationImmunohistochemistryElicitorRespiratory burstMicroscopy ElectronPlants ToxicBiochemistrychemistryCell cultureBiophysicsCalciumSignal transduction010606 plant biology & botany
researchProduct

In vivoanalysis of the lumenal binding protein (BiP) reveals multiple functions of its ATPase domain

2007

International audience; The endoplasmic reticulum (ER) chaperone binding protein (BiP) binds exposed hydrophobic regions of misfolded proteins. Cycles of ATP hydrolysis and nucleotide exchange on the ATPase domain were shown to regulate the function of the ligand-binding domain in vitro. Here we show that ATPase mutants of BiP with defective ATP-hydrolysis (T46G) or ATP-binding (G235D) caused permanent association with a model ligand, but also interfered with the production of secretory, but not cytosolic, proteins in vivo. Furthermore, the negative effect of BiP(T46G) on secretory protein synthesis was rescued by increased levels of wild-type BiP, whereas the G235D mutation was dominant. U…

0106 biological sciencesgenetic structuresRecombinant Fusion ProteinsATPaseBlotting WesternGreen Fluorescent ProteinsPlant ScienceBINDING PROTEINEndoplasmic ReticulumModels Biological01 natural sciencesChromatography Affinity[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciencesAdenosine TriphosphateTobaccoPROTEIN FOLDINGGeneticsImmunoprecipitationEndoplasmic Reticulum Chaperone BiPHSP70Heat-Shock Proteins030304 developmental biologyCHAPERONEAdenosine Triphosphatases0303 health sciencesbiologyHydrolysisProtoplastsEndoplasmic reticulumBinding proteinCell BiologyPlants Genetically ModifiedLigand (biochemistry)Secretory proteinBiochemistryChaperone (protein)MutationChaperone bindingbiology.proteinATPASEElectrophoresis Polyacrylamide GelProtein foldingMolecular ChaperonesProtein BindingSignal Transduction010606 plant biology & botanyThe Plant Journal
researchProduct

Fishery-dependent and -independent data lead to consistent estimations of essential habitats

2016

AbstractSpecies mapping is an essential tool for conservation programmes as it provides clear pictures of the distribution of marine resources. However, in fishery ecology, the amount of objective scientific information is limited and data may not always be directly comparable. Information about the distribution of marine species can be derived from two main sources: fishery-independent data (scientific surveys at sea) and fishery-dependent data (collection and sampling by observers in commercial vessels). The aim of this paper is to compare whether these two different sources produce similar, complementary, or different results. We compare them in the specific context of identifying the Es…

0106 biological scienceshttp://aims.fao.org/aos/agrovoc/c_28840Biodiversité et Ecologiehabitatmodélisation spatialehttp://aims.fao.org/aos/agrovoc/c_38371OceanographyGaleus melastomus01 natural sciencesRessource halieutiquehttp://aims.fao.org/aos/agrovoc/c_38127Scyliorhinus caniculamodèle hiérarchiqueSpatial statisticsEcologymodèle de distributionSampling (statistics)Contrast (statistics)Cross-validationModélisation et simulationGeographyHabitatGestion des pêchesModeling and Simulationhttp://aims.fao.org/aos/agrovoc/c_10566http://aims.fao.org/aos/agrovoc/c_3456http://aims.fao.org/aos/agrovoc/c_38117survey designMarine conservationSpecies Distribution ModelsEcology (disciplines)Bayesian probabilityEtmopterus spinaxenquête statistiqueDonnée sur les pêchesmodèle spatiotemporelSede Central IEOContext (language use)Aquatic ScienceDistribution des populationsBayesian hierarchical models010603 evolutionary biologyhttp://aims.fao.org/aos/agrovoc/c_24026elasmobranchsBiodiversity and Ecologyélasmobrancheétude comparativeBayesian hierarchical models;Cross-validation;Species Distribution Models;Spatial statistics;INLA;elasmobranchs ; survey designINLA14. Life underwaterspecies distribution modelsEcology Evolution Behavior and Systematicshttp://aims.fao.org/aos/agrovoc/c_6113collecte des donnéesÉcologie marinehttp://aims.fao.org/aos/agrovoc/c_29788http://aims.fao.org/aos/agrovoc/c_4609010604 marine biology & hydrobiologyGestion et conservation des pêchescross validation[INFO.INFO-MO]Computer Science [cs]/Modeling and Simulationmodèle bayésienFisheryM01 - Pêche et aquaculture - Considérations généraleshttp://aims.fao.org/aos/agrovoc/c_2a75d27eThéorie bayésienneM40 - Écologie aquatiqueSpatial ecologyhttp://aims.fao.org/aos/agrovoc/c_2942[SDE.BE]Environmental Sciences/Biodiversity and Ecologyvalidation croiséeElasmobranchii
researchProduct