Search results for "signaalianalyysi"
showing 10 items of 36 documents
Group analysis of ongoing EEG data based on fast double-coupled nonnegative tensor decomposition
2019
Abstract Background Ongoing EEG data are recorded as mixtures of stimulus-elicited EEG, spontaneous EEG and noises, which require advanced signal processing techniques for separation and analysis. Existing methods cannot simultaneously consider common and individual characteristics among/within subjects when extracting stimulus-elicited brain activities from ongoing EEG elicited by 512-s long modern tango music. New method Aiming to discover the commonly music-elicited brain activities among subjects, we provide a comprehensive framework based on fast double-coupled nonnegative tensor decomposition (FDC-NTD) algorithm. The proposed algorithm with a generalized model is capable of simultaneo…
Automatic sleep scoring: A deep learning architecture for multi-modality time series
2020
Background: Sleep scoring is an essential but time-consuming process, and therefore automatic sleep scoring is crucial and urgent to help address the growing unmet needs for sleep research. This paper aims to develop a versatile deep-learning architecture to automate sleep scoring using raw polysomnography recordings. Method: The model adopts a linear function to address different numbers of inputs, thereby extending model applications. Two-dimensional convolution neural networks are used to learn features from multi-modality polysomnographic signals, a “squeeze and excitation” block to recalibrate channel-wise features, together with a long short-term memory module to exploit long-range co…
Model order effects on ICA of resting-state complex-valued fMRI data : application to schizophrenia
2018
Abstract Background Component splitting at higher model orders is a widely accepted finding for independent component analysis (ICA) of functional magnetic resonance imaging (fMRI) data. However, our recent study found that intact components occurred with subcomponents at higher model orders. New method This study investigated model order effects on ICA of resting-state complex-valued fMRI data from 82 subjects, which included 40 healthy controls (HCs) and 42 schizophrenia patients. In addition, we explored underlying causes for distinct component splitting between complex-valued data and magnitude-only data by examining model order effects on ICA of phase fMRI data. A best run selection me…
Discovering hidden brain network responses to naturalistic stimuli via tensor component analysis of multi-subject fMRI data
2021
The study of brain network interactions during naturalistic stimuli facilitates a deeper understanding of human brain function. To estimate large-scale brain networks evoked with naturalistic stimuli, a tensor component analysis (TCA) based framework was used to characterize shared spatio-temporal patterns across subjects in a purely data-driven manner. In this framework, a third-order tensor is constructed from the timeseries extracted from all brain regions from a given parcellation, for all participants, with modes of the tensor corresponding to spatial distribution, time series and participants. TCA then reveals spatially and temporally shared components, i.e., evoked networks with the …
Pain fingerprinting using multimodal sensing: pilot study
2021
Abstract Pain is a complex phenomenon, the experience of which varies widely across individuals. At worst, chronic pain can lead to anxiety and depression. Cost-effective strategies are urgently needed to improve the treatment of pain, and thus we propose a novel home-based pain measurement system for the longitudinal monitoring of pain experience and variation in different patients with chronic low back pain. The autonomous nervous system and audio-visual features are analyzed from heart rate signals, voice characteristics and facial expressions using a unique measurement protocol. Self-reporting is utilized for the follow-up of changes in pain intensity, induced by well-designed physical …
An Automatic Sleep Scoring Toolbox : Multi-modality of Polysomnography Signals’ Processing
2019
Sleep scoring is a fundamental but time-consuming process in any sleep laboratory. To speed up the process of sleep scoring without compromising accuracy, this paper develops an automatic sleep scoring toolbox with the capability of multi-signal processing. It allows the user to choose signal types and the number of target classes. Then, an automatic process containing signal pre-processing, feature extraction, classifier training (or prediction) and result correction will be performed. Finally, the application interface displays predicted sleep structure, related sleep parameters and the sleep quality index for reference. To improve the identification accuracy of minority stages, a layer-w…
Objective Extraction of Evoked Event-Related Oscillation from Time-Frequency Representation of Event-Related Potentials
2020
Evoked event-related oscillations (EROs) have been widely used to explore the mechanisms of brain activities for both normal people and neuropsychiatric disease patients. In most previous studies, the calculation of the regions of evoked EROs of interest is commonly based on a predefined time window and a frequency range given by the experimenter, which tends to be subjective. Additionally, evoked EROs sometimes cannot be fully extracted using the conventional time-frequency analysis (TFA) because they may be overlapped with each other or with artifacts in time, frequency, and space domains. To further investigate the related neuronal processes, a novel approach was proposed including three…
Data-driven analysis for fMRI during naturalistic music listening
2017
Interest towards higher ecological validity in functional magnetic resonance imaging (fMRI) experiments has been steadily growing since the turn of millennium. The trend is reflected in increasing amount of naturalistic experiments, where participants are exposed to the real-world complex stimulus and/or cognitive tasks such as watching movie, playing video games, or listening to music. Multifaceted stimuli forming parallel streams of input information, combined with reduced control over experimental variables introduces number of methodological challenges associated with isolating brain responses to individual events. This exploratory work demonstrated some of those methodological challeng…
Snowball ICA: A Model Order Free Independent Component Analysis Strategy for Functional Magnetic Resonance Imaging Data
2020
In independent component analysis (ICA), the selection of model order (i.e., number of components to be extracted) has crucial effects on functional magnetic resonance imaging (fMRI) brain network analysis. Model order selection (MOS) algorithms have been used to determine the number of estimated components. However, simulations show that even when the model order equals the number of simulated signal sources, traditional ICA algorithms may misestimate the spatial maps of the signal sources. In principle, increasing model order will consider more potential information in the estimation, and should therefore produce more accurate results. However, this strategy may not work for fMRI because …
fICA : FastICA Algorithms and Their Improved Variants
2019
Abstract In independent component analysis (ICA) one searches for mutually independent non gaussian latent variables when the components of the multivariate data are assumed to be linear combinations of them. Arguably, the most popular method to perform ICA is FastICA. There are two classical versions, the deflation-based FastICA where the components are found one by one, and the symmetric FastICA where the components are found simultaneously. These methods have been implemented previously in two R packages, fastICA and ica. We present the R package fICA and compare it to the other packages. Additional features in fICA include optimization of the extraction order in the deflation-based vers…