Search results for "soil"
showing 10 items of 3493 documents
ITS1 region of the rDNA of Pythium megacarpum sp. nov., its taxonomy, and its comparison with related species.
2000
Pythium megacarpum sp. nov., was isolated from a soil sample taken from a wheat field in Lille in northern France. It was mistakenly described as Pythium ostracodes Drechsler [Paul, B (1994) Cryptogam. -Mycol. 15,263-271]. Despite morphological resemblance, the comparison between the internal transcribed spacer (ITS)1 regions of the rDNA of the two fungi, leaves no doubt of their different identities. This species is unique because of its large oogonia and plerotic, thick walled oospores, its monoclinous antheridia with large antheridial cells and its lack of zoospores. The character combination of P. megacarpum and the ITS1 sequence of its rDNA, justifies the creation of a new species with…
Responses of co-occurring populations of Dendrobaena octaedra (Lumbricidae) and Cognettia sphagnetorum (Enchytraeidae) to soil pH, moisture and resou…
2000
Summary Dendrobaena octaedra (Lumbricidae) and Cognettia sphagnetorum (Enchytraeidae) are the two most dominating soil invertebrates in terms of biomass in boreal coniferous forest soils. A microcosm experiment was set up in order to study the influence of pH, moisture and resource addition on D. octaedra and C. sphagnetorum when both species are simultaneously present. Two kinds of coniferous forest humus were used as substrate, pine stand humus (pH 4.2), and spruce stand humus (pH 4.6); in the third treatment the pine stand humus was adjusted with slaked lime (CaOH 2 ) to the same initial pH as the spruce stand humus. Each substrate was adjusted to water contents of 25%, 42.5% and 60% of …
Biotic methylation of mercury by intestinal and sulfate-reducing bacteria and their potential role in mercury accumulation in the tissue of the soil-…
2014
Abstract Monomethylmercury as one of the most toxic mercury species influences the health and development of higher organisms and tends to accumulate in the tissue of animals and humans. The aim of this study was to explore the mercury methylating capability of (1) intestinal microbiota of the soil-living earthworm Eisenia foetida (E. foetida) and (2) intestinal sulfate reducing-bacteria in pure cultures. After exposing animals to inorganic mercury chloride (4 mg kg−1 Hg2+) in soil and sterile soil for ten days, the amount of methylmercury in tissue was measured. Despite sterilization of soil, the accumulation of the organic mercury species in tissue was 51 ng g−1. To elucidate the potentia…
The phylogeny of the European high mountain genus Adenostyles (Asteraceae-Senecioneae) reveals that edaphic shifts coincide with dispersal events.
2013
UNLABELLED PREMISE OF THE STUDY Heterogeneity of edaphic conditions plays a large role in driving the diversification of many plant groups. In the Alps and other European high mountains, many closely related calcicole and calcifuge plant taxa exist. To better understand patterns and processes of edaphic differentiation, the phylogeny of the edaphically variable genus Adenostyles was studied. The genus contains three species, of which A. alpina has five subspecies. Each species and subspecies is largely confined to either calcareous or noncalcareous substrates. • METHODS We analyzed the phylogeny of Adenostyles using DNA sequences of nrITS, nrETS, nuclear chalcone synthase, and three plastid…
Long-term dynamics of Collembola in a pine forest ecosystemProceedings of the Xth international Colloquium on Apterygota, České Budějovice 2000: Apte…
2002
Summary Biomonitoring data on soil Collembola collected over a six year period (1992-1997) in Scots pine ( Pinus sylvestris L.) forest in the Northern Vidzeme Biosphere Reserve, northern Latvia, are analysed. Monitoring was conducted in three plots: young (30-40 years), middle-aged (50—70 years), and old (150—200 years) pine stands. Sampling was performed once a year, in late August or early September, according to a systematic sampling scheme. One hundred soil cores (5 cm 2 × 10 cm) were taken within each plot every year, Collembola were extracted from the cores by using a modified high gradient extractor. During the monitoring period, there was a tendency of climate warming between 1992 a…
Earthworms and pH affect communities of nematodes and enchytraeids in forest soil
2003
In northern boreal forests the occurrence of endogeic and anecic earthworms is determined by soil pH. Increasing evidence suggests that large detritivorous soil animals such as earthworms can influence the other components of the decomposer community. To study the effects of earthworms and pH on soil nematode and enchytraeid communities, a factorially designed experiment was conducted with Lumbricus rubellus and/or Aporrectodea caliginosa. Earthworms were added to "mesocosms" containing unlimed (pH 4.8) or limed (pH 6.1) coniferous mor humus with their natural biota of micro-organisms. In the absence of earthworms, nematodes were significantly more abundant in limed than in unlimed humus. E…
Bioaccumulation of organochlorine compounds in earthworms
1992
Abstract Bioaccumulation of chlorophenolic wood preservatives 2,3,4,6-tetrachlorophenol (2346-TeCP) and pentachlorophenol (PeCP) and their metabolites in earthworms were studied in the laboratory, and by taking worm samples from the contaminated soil of a sawmill which was abandoned 28 yr ago. In two laboratory experiments 2346-TeCP (containing PeCP as impurity) was added into the soil, and samples were taken at certain intervals both from the soil and the earthworms ( Lumbricus rubellus in experiment 1 and Aporrectodea caliginosa tuberculata in experiment 2). Considerable amounts of chlorophenols were found in field samples. Soil concentrations ranged from 157 to 338 μg 2346-TeCP g −1 dry …
Accumulation of Pb and Zn in Bidens triplinervia and Senecio sp. spontaneous species from mine spoils in Peru and their potential use in phytoremedia…
2012
Abstract Heavy metal toxicity has become a global concern due to the ever-increasing contamination of soil, water and crops. Until recent decades little has been known about the remediation of mining sites using spontaneous plants in Latin America. Soil and plant samples were taken in Peru, at a polymetallic mine (mainly silver, lead and copper) in Cajamarca Province, Hualgayoc district. Top soils (0–20 cm) were analyzed for physical and chemical properties by standard methods. Total Pb and Zn concentrations in top soils were determined by ICP-OES. Similar metals in plants were analyzed separately (aerial and root system). Ti content was used as an indicator for contamination of plant sampl…
Differential responses of bacterial and archaeal groups at high taxonomical ranks to soil management
2010
Little is known about abundances of the major bacterial taxa in agricultural soils and how they are affected by fertilization or other agricultural practices. Our aim was to determine the abundance and relative distribution of several bacterial phyla and one class, as well as the archaeal and crenarchaeal communities, and how they were affected by different fertilization regimes to examine whether specific responses of microorganisms could be identified at these high taxonomic ranks. We used real-time PCR with taxa specific primers to quantify the abundance of the Actinobacteria, Acidobacteria, Bacteriodetes, Firmicutes, Gemmatimonadetes, Verrucomicrobia, Alphaproteobacteria and Crenarchaeo…
Aerobic Endospore-forming Bacteria and Soil Invertebrates
2011
The intestinal microbiotas of only a few soil invertebrates such as collembola (springtails), earthworms, nematodes, isopods (woodlice and pill bugs), millipedes and termites have been studied by classical and molecular methods in the last decades. It became obvious that these lower members of the soil biota harbour complex microbial communities that sometimes reach counts of 1011 cells ml−1 in their intestinal tracts. The gut microbiotas of the soil fauna include a variety of microorganisms from all three domains of life (Bacteria, Archaea, Eucarya). The bacterial species can mainly be assigned to the Gram-positive phyla Firmicutes and Actinobacteria as well as the Gram-negative phyla Prot…