Search results for "soil"
showing 10 items of 3493 documents
A simplified method based on Beerkan infiltration run
2013
A simplified method based on Beerkan infiltration run (SBI) to determine field saturated soil hydraulic conductivity
Trichuris trichiura egg extract proteome reveals potential diagnostic targets and immunomodulators.
2021
The proteomic analysis was performed at the proteomics facility of SCSIE, University of Valencia (Burjassot, Spain) that belongs to ProteoRed, PRB2-ISCIII, Madrid, Spain. We also thank Dr. Tatiana Corey, Dr. Amy Beierschmitt and Dr. Pompei Bolfa for their support during sample collection.
Abundance of narG , nirS , nirK , and nosZ Genes of Denitrifying Bacteria during Primary Successions of a Glacier Foreland
2006
ABSTRACT Quantitative PCR of denitrification genes encoding the nitrate, nitrite, and nitrous oxide reductases was used to study denitrifiers across a glacier foreland. Environmental samples collected at different distances from a receding glacier contained amounts of 16S rRNA target molecules ranging from 4.9 × 10 5 to 8.9 × 10 5 copies per nanogram of DNA but smaller amounts of narG , nirK , and nosZ target molecules. Thus, numbers of narG , nirK , nirS , and nosZ copies per nanogram of DNA ranged from 2.1 × 10 3 to 2.6 × 10 4 , 7.4 × 10 2 to 1.4 × 10 3 , 2.5 × 10 2 to 6.4 × 10 3 , and 1.2 × 10 3 to 5.5 × 10 3 , respectively. The densities of 16S rRNA genes per gram of soil increased with…
Key features of bacterial communities in Southern Europe soils vulnerable to desertification
2019
Mediterranean soils are experiencing increasingly negative effects of climate change due to drought and extreme weather phenomena that negatively affect agriculture, already suffering social and economic constraints. The LIFE project DESERT-ADAPT - Preparing desertification areas for increased climate change - (http://www.desert-adapt.it/index.php/en/) focuses on agricultural adaptation measures aimed at reverting ongoing desertification trends, while improving the socioeconomic conditions of farmers. The soil microbiota is recognized as key player in both diversity and productivity of terrestrial ecosystems and it is mandatory to include its role in sustainable agronomic management. In ord…
Combined metabolic activity within an atrazine-mineralizing community enriched from agrochemical factory soil
2007
Abstract The main objective of this work was to characterize an atrazine-mineralizing community originating from agrochemical factory soil, especially to elucidate the catabolic pathway and individual metabolic and genetic potentials of culturable members. A stable four-member bacterial community, characterized by colony morphology and 16S rDNA sequencing, was rapidly able to mineralize atrazine to CO 2 and NH 3 . Two primary organisms were identified as Arthrobacter species (ATZ1 and ATZ2) and two secondary organisms (CA1 and CA2) belonged to the genera Ochrobactrum and Pseudomonas, respectively. PCR assessment of atrazine-degrading genetic potential of the community, revealed the presence…
Carbon and nitrogen stable isotope ratios of soils and grasses as indicators of soil characteristics and biological taxa
2019
Abstract The use of stable isotope techniques can assist in understanding interactions of plants with various abiotic and biotic processes. In the research, we focused on carbon (C) and nitrogen (N) isotopes because they are the most important resources influencing plant function and the biogeochemical cycles. The 13C/12C and 15N/14N ratios in plants and in soils and the relationships between these ratios and biological and environmental factors of widely distributed native C3 plants (couch grass, plantain and yarrow) collected from two sites in St. Petersburg, Russia were studied. The soil characteristics of the sites were rather different. This had a significant effect on the isotope rati…
The importance of the moss layer in sustaining biological diversity of Gamasina mites in coniferous forest soil
2008
Summary The feather moss layer of boreal coniferous forests is known to buffer the underlying soil temperature and to be a major component in the nitrogen and phosphorus cycles by efficient scavenging of nutrients from throughfall and direct precipitation. Through indirect or direct effects the feather moss layer may also play a significant role in forming soil organism communities. In this 4-year experimental field study, the predatory Gamasina mite diversity was estimated in plots where the feather moss layer was removed or disturbed by turning over, in relation to that in control plots. Species richness, Shannon's diversity and equitability in spring but not autumn were decreased when th…
Interrelationships between mycorrhizal symbiosis, soil pH and plant sex modify the performance of Antennaria dioica
2010
AM symbiosis is usually beneficial for plants, but the benefits gained may depend on the soil abiotic factors. In dioecious plants, female and male individuals have different resource demands and allocation patterns. As a consequence of these differences, it is logical to assume that female and male plants differ in their relationship with arbuscular mycorrhizal (AM) fungi, although this has rarely been examined. We used a factorial greenhouse experiment to investigate whether female and male plants in the dioecious model species Antennaria dioica have a different relationship with their AM symbionts under two soil pH levels. In particular, we asked: (1) Do the sexes in A. dioica have sex-s…
The soil as a reservoir for antagonists to plant diseases
2007
The soil is often considered the milieu providing support for plant roots, water and nutrients for plant growth. But it is also considered a hostile environment harbouring plant pathogenic nematodes, bacteria and fungi. The most common attitude is to try to eliminate the plant pathogenic organisms by biocidal treatments such as methyl bromide fumigation, which are dangerous for man and the environment. Beside this pathogen eradication strategy, another approach to control soil-borne plant diseases consists in studying the plant-pathogen interactions at the cellular and molecular level to create new resistant cultivars or to develop new plant protection products based on elicitation of plant…
Biocrusts and catchment asymmetry in Tabernas Desert (Almeria, Spain)
2022
Abstract Catchment asymmetry is a fairly frequent phenomenon on a global scale but the main causes leading to its formation are still not well understood. Where the intervention of structural or tectonic causes is not relevant, asymmetry seems to result from differential erosion between opposite slopes that flow into the same channel, which is frequently associated with contrasted biocrust and/or vegetation covers. Biocrusts are known to be important surface stabilizing agents. However, their geomorphological consequences at the landscape scale are little known. In this study we combined field measurements with digital elevation models and image analysis to determine whether catchment asymm…