Search results for "soil"

showing 10 items of 3493 documents

Shallow water marine sediment bacterial community shifts along a natural CO2 gradient in the Mediterranean Sea off Vulcano, Italy.

2014

The effects of increasing atmospheric CO2 on ocean ecosystems are a major environmental concern, as rapid shoaling of the carbonate saturation horizon is exposing vast areas of marine sediments to corrosive waters worldwide. Natural CO2 gradients off Vulcano, Italy, have revealed profound ecosystem changes along rocky shore habitats as carbonate saturation levels decrease, but no investigations have yet been made of the sedimentary habitat. Here, we sampled the upper 2 cm of volcanic sand in three zones, ambient (median pCO(2) 419 mu atm, minimum Omega(arag) 3.77), moderately CO2-enriched (median pCO(2) 592 mu atm, minimum Omega(arag) 2.96), and highly CO2-enriched (median pCO(2) 1611 mu at…

Biogeochemical cycleGeologic SedimentsFORAMINIFERAMolecular Sequence DataSoil SciencePolymerase Chain ReactionPH GRADIENTForaminiferaCARBONMediterranean seaRNA Ribosomal 16SMediterranean SeaEcosystemSeawater14. Life underwaterMICROBIAL COMMUNITIESRelative species abundanceEcology Evolution Behavior and SystematicsEcologybiologyBacteriaEcologyOCEAN ACIDIFICATIONSedimentOcean acidificationBiodiversitySequence Analysis DNACORALCarbon DioxideHydrogen-Ion Concentrationbiology.organism_classificationSP NOV.Italy13. Climate actionGenes BacterialECOSYSTEMSeawaterGEN. NOV.TIDAL FLAT SEDIMENTMicrobial ecology
researchProduct

Stable Copper Isotopes: A Novel Tool to Trace Copper Behavior in Hydromorphic Soils

2010

Copper is an essential micronutrient for all organisms but may also be a pollutant. We studied the natural abundance of stable Cu isotope ratios in four soils to test whether δ 65 Cu values can be used as a tracer for biogeochemical processes in hydromorphic soils. Two of the soils were affected by stagnant water and the other two by groundwater. We determined standard soil properties and Cu partitioning into seven fractions of a sequential extraction. Copper stable isotope ratios were measured in total soil digests with multicollector inductively coupled plasma mass spectrometry. Copper concentrations in the study soils were low to average (5-34 mg kg -1 ). The variation in Cu isotope rati…

Biogeochemical cycleIsotopeChemistryStable isotope ratioIsotopes of copperEnvironmental chemistrySoil waterSoil Sciencechemistry.chemical_elementFractionationInductively coupled plasma mass spectrometryCopperSoil Science Society of America Journal
researchProduct

The Relations between the Sulphur Forms and the Organic and Mineral Components in Soils Developed under Spruce Forests in the Mont Lozere (France)

1992

Mean interannual (1981–1985) hydrochemical input-output budgets indicate net gains of sulphur in forested and unforested watersheds (1150–1450m deviation range) of Mont Lozere (2). The values of the sulphur gains, ranging from 5 to 10 kg/ha/yr. according to the watersheds are underestimated, since dry deposition is not considered in the budgets (1). It is now well known (3,4) that sulphur accumulation in forest catchments is mediated physically by sulphate adsorption on mineral amorphous surfaces and microbially by incorporation of sulphur into soil organic matter. To get a better assessment of these processes, in order to foresee their long term effects upon the proton-budgets and biogeoch…

Biogeochemical cycleMineralchemistrySoil organic matterEnvironmental chemistrySoil waterSoil horizonchemistry.chemical_elementInorganic sulphateSoil scienceEcosystemSulfurGeology
researchProduct

Biogeochemical responses to nutrient, moisture and temperature manipulations of soil from Signy Island, South Orkney Islands in the Maritime Antarctic

2014

AbstractWe have investigated how the microbially-driven processes of carbon (C) mineralization (respiration) and nitrogen (N) mineralization/immobilization in a soil from the northern Maritime Antarctic respond to differences in water availability (20% and 80% water-holding capacity) and temperature (5°C and 15°C) in the presence and absence of different organic substrates (2 mg C as either glucose, glycine or tryptone soy broth (TSB) powder (a complex microbial growth medium)) in a controlled laboratory experiment over 175 days. Soil respiration and N mineralization/immobilization in the presence of a C-rich substrate (glucose) increased with increases in water and temperature. These facto…

Biogeochemical cycleMoistureChemistrySettore AGR/13 - Chimica Agrariacarbon mineralization nitrogen mineralization organic substrates soil respiration warming water additionGeologyMineralization (soil science)OceanographySoil respirationNutrientEnvironmental chemistryBotanyRespirationCyclingNitrogen cycleEcology Evolution Behavior and SystematicsAntarctic Science
researchProduct

The role of hydrology on enhanced weathering for carbon sequestration I. Modeling rock-dissolution reactions coupled to plant, soil moisture, and car…

2021

Abstract Enhanced Weathering (EW) resulting from soil amendment with highly reactive silicate minerals is regarded as one of the most effective techniques for carbon sequestration. While in laboratory conditions silicate minerals dissolution rates are well characterized, in field conditions the rate of the dissolution reaction is more difficult to predict, not least because it interacts with soil, plant, and hydrologic processes. Here we present a dynamic mass balance model connecting biogeochemical and ecohydrological dynamics to shed light on these intertwined processes involved in EW. We focus on the silicate mineral olivine, for its faster laboratory dissolution rate, and pay particular…

Biogeochemical cycleMoistureSettore ICAR/02 - Costruzioni Idrauliche E Marittime E Idrologiachemistry.chemical_elementSoil scienceCarbon sequestrationSilicatechemistry.chemical_compoundchemistrySilicate mineralsEnhanced weatheringEnvironmental scienceCarbon sequestration Climate change Enhanced weatheringCarbonDissolutionWater Science and TechnologyAdvances in Water Resources
researchProduct

2018

AbstractWhile significant efforts have been invested in reconstructing the early evolution of the Earth’s atmosphere–ocean–biosphere biogeochemical nitrogen cycle, the potential role of an early continental contribution by a terrestrial, microbial phototrophic biosphere has been largely overlooked. By transposing to the Archean nitrogen fluxes of modern topsoil communities known as biological soil crusts (terrestrial analogs of microbial mats), whose ancestors might have existed as far back as 3.2 Ga ago, we show that they could have impacted the evolution of the nitrogen cycle early on. We calculate that the net output of inorganic nitrogen reaching the Precambrian hydrogeological system c…

Biogeochemical cycleTopsoilMultidisciplinary010504 meteorology & atmospheric sciencesEarth scienceGreat Oxygenation EventGeneral Physics and AstronomyBiosphereGeneral Chemistry010502 geochemistry & geophysicsEarly Earth01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology13. Climate actionEnvironmental scienceEcosystem14. Life underwaterMicrobial matNitrogen cycle0105 earth and related environmental sciencesNature Communications
researchProduct

Novel virocell metabolic potential revealed in agricultural soils by virus-enriched soil metagenome analysis

2021

International audience; Viruses are now recognized as important players in microbial dynamics and biogeochemical cycles in the oceans. Yet, compared with aquatic ecosystems, virus discovery in terrestrial ecosystems has been challenging partly due to the inherent complexity of soils. To expand our understanding of soil viruses and their putative contributions to soil microbial processes, we analysed metagenomes of community-level virus-enriched suspensions by tangential flow filtration obtained from two French agricultural soils. We found viral sequences representing a total of 239 viral operational taxonomic units that corresponded to 29.5% of the mapping reads in the metagenomic datasets.…

Biogeochemical cycleviruses[SDV]Life Sciences [q-bio]BiologyGENOMASCarbon cycle03 medical and health sciencesSoilEcology Evolution Behavior and SystematicsEcosystem030304 developmental biology2. Zero hunger0303 health sciencesRhizosphere030306 microbiologyEcologyAquatic ecosystem15. Life on landAgricultural and Biological Sciences (miscellaneous)MetagenomicsSoil waterHorizontal gene transferRhizosphereVirusesMetagenomeTerrestrial ecosystem
researchProduct

Relationships between soil water repellency and microbial community composition under different plant species in a Mediterranean semiarid forest

2014

Abstract Soil water repellency (SWR) can influence many hydrological soil properties, including water infiltration, uneven moisture distribution or water retention. In the current study we investigated how variable SWR persistence in the field is related to the soil microbial community under different plant species (P. halepensis, Q. rotundifolia, C. albidus and R. officinalis) in a Mediterranean forest. The soil microbial community was determined through phospholipid fatty acids (PLFA). The relationships between microbiological community structure and the soil properties pH, Glomalin Related Soil Protein (GRSP) and soil organic matter (SOM) content were also studied. Different statistical …

BiohydrologyMediterranean climatesoil hydrophobicityTA Engineering (General). Civil engineering (General)Phospholipids fatty acidsActinobacteriaBotanymedicinebiohydrologyGlomalin Related Soil ProteinWater Science and TechnologyFluid Flow and Transfer Processesglomalin related soil proteinbiologyphospholipids fatty acidsMechanical EngineeringSoil organic matterCommunity structureactinobacteriaMicrobial community structureHydraulic engineeringbiology.organism_classificationWater retentionActinobacteriaGlomalinMicrobial population biologyAgronomymicrobial community structureSoil waterbiology.proteinEnvironmental sciencemedicine.symptomTC1-978Soil hydrophobicity
researchProduct

Postembryonic development of the troglobitic planthopper species Valenciolenda fadaforesta Hoch & Sendra, 2021 (Hemiptera, Fulgoromorpha, Ki…

2022

All nymphal instars of the recently discovered troglobitic planthopper species Valenciolenda fadaforesta Hoch & Sendra, 2021 are described. This represents the first documentation of the complete postembryonic development of any species in the family Kinnaridae. Characters of the external morphology are described and illustrated, and a key to the instars are provided to facilitate discrimination among the different nymphal stages. While V. fadaforesta nymphs share certain synapomorphies with other Fulgoromorpha (except the Tettigometridae), e.g., the cog-wheel structures of the metatrochanters, other characters may be correlated with the subterranean way of life of the species, and thus…

BiologiaFulgoroideaInsectaArthropodaSoil ScienceKinnaridaetroglobiteBiotaHemipteraCavestaxonomyZoologiamorphologyValenciolendaAnimaliaAnimal Science and ZoologyValenciolenda fadaforestaEcology Evolution Behavior and SystematicsIberian PeninsulaNature and Landscape ConservationSubterranean Biology
researchProduct

Comparative genetic diversity of the narG, nosZ, and 16S rRNA genes in fluorescent Pseudomonads

2003

ABSTRACT The diversity of the membrane-bound nitrate reductase ( narG ) and nitrous oxide reductase ( nosZ ) genes in fluorescent pseudomonads isolated from soil and rhizosphere environments was characterized together with that of the 16S rRNA gene by a PCR-restriction fragment length polymorphism assay. Fragments of 1,008 bp and 1,433 bp were amplified via PCR with primers specific for the narG and nosZ genes, respectively. The presence of the narG and nosZ genes in the bacterial strains was confirmed by hybridization of the genomic DNA and the PCR products with the corresponding probes. The ability of the strains to either reduce nitrate or totally dissimilate nitrogen was assessed. Overa…

BiologyNitrate reductaseDNA RibosomalNitrate ReductasePlant RootsPolymerase Chain ReactionApplied Microbiology and BiotechnologyFluorescencelaw.invention03 medical and health sciencesPlant MicrobiologyNitrate ReductaseslawPseudomonasRNA Ribosomal 16SGenetic variationGeneSoil MicrobiologyPolymerase chain reactionComputingMilieux_MISCELLANEOUS030304 developmental biology2. Zero hungerGenetics[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesNitratesEcology030306 microbiologyPseudomonasGenetic VariationGenes rRNARibosomal RNA16S ribosomal RNAbiology.organism_classificationMolecular biologygenomic DNA[SDV.EE] Life Sciences [q-bio]/Ecology environmentGenes BacterialOxidoreductasesPolymorphism Restriction Fragment LengthFood ScienceBiotechnology
researchProduct