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showing 10 items of 487 documents

The coffee-machine bacteriome: biodiversity and colonisation of the wasted coffee tray leach

2015

AbstractMicrobial communities are ubiquitous in both natural and artificial environments. However, microbial diversity is usually reduced under strong selection pressures, such as those present in habitats rich in recalcitrant or toxic compounds displaying antimicrobial properties. Caffeine is a natural alkaloid present in coffee, tea and soft drinks with well-known antibacterial properties. Here we present the first systematic analysis of coffee machine-associated bacteria. We sampled the coffee waste reservoir of ten different Nespresso machines and conducted a dynamic monitoring of the colonization process in a new machine. Our results reveal the existence of a varied bacterial community…

Food HandlingMicrobial ConsortiaBiodiversityAgrobacteriumBiologyCoffeeArticleBioremediationEnterobacteriaceaeCaffeinePseudomonasRNA Ribosomal 16SColonizationMicrobiomeMultidisciplinaryDecaffeinationEcologybusiness.industryBacteriomeBiodiversitySequence Analysis DNAbiology.organism_classificationAdaptation PhysiologicalBiotechnologyAnti-Bacterial AgentsColonisationBiodegradation EnvironmentalMicroscopy Electron ScanningbusinessPaenibacillusBacteriaEnterococcusScientific Reports
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Modeling of Magnetoresistive-Based Electrical Current Sensors: A Technological Approach

2007

The utilization of modeling tools can, in many cases, help us in the design and final prototyping of any sort of sensors. In this paper, we describe a finite-element method (FEM) model applied to a hybrid technology involving a full Wheatstone bridge spin-valve-based electrical current sensor. After validating the model against experimental results, we focus our studies on geometrical aspects of the sensor configuration, in order to detect possible deviations that may have occurred during the fabrication process. In this regard, the characteristics of the behavior of the sensor depending on lateral displacements and inclination are included. Moreover, the frequency response of the sensor is…

Frequency responseEngineeringWheatstone bridgebusiness.industryProcess (computing)Spin valveFinite element methodlaw.inventionlawElectronic engineeringsortCurrent sensorElectrical and Electronic EngineeringbusinessFocus (optics)InstrumentationIEEE Sensors Journal
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Fuzzy fixed points of generalized F2-geraghty type fuzzy mappings and complementary results

2016

The aim of this paper is to introduce generalized F2-Geraghty type fuzzy mappings on a metric space for establishing the existence of fuzzy fixed points of such mappings. As an application of our result, we obtain the existence of common fuzzy fixed point for a generalized F2-Geraghty type fuzzy hybrid pair. These results unify, generalize and complement various known comparable results in the literature. An example and an application to theoretical computer science are presented to support the theory proved herein. Also, to suggest further research on fuzzy mappings, a Feng–Liu type theorem is proved.

Fuzzy mappingSorting algorithmFuzzy classificationMathematics::General MathematicsFuzzy mappingFuzzy fixed pointlcsh:Analysis02 engineering and technologyType (model theory)01 natural sciencesFuzzy logicfuzzy fixed point fuzzy mapping sorting algorithmSettore MAT/05 - Analisi Matematica0202 electrical engineering electronic engineering information engineeringFuzzy number0101 mathematicsMathematicsDiscrete mathematicsSorting algorithmApplied Mathematicslcsh:QA299.6-433010101 applied mathematicsFuzzy mathematicsFuzzy set operations020201 artificial intelligence & image processingAnalysis
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Sex differences in the prevalence of Helicobacter pylori infection: an individual participant data pooled analysis (StoP Project)

2019

Background Helicobacter pylori (H. pylori) infection is more frequent among men, though the magnitude of the association might be inaccurate due to potential misclassification of lifetime infection and publication bias. Moreover, infection is common, and most studies are cross-sectional. Thus, prevalence ratios (PRs) may be easier to interpret than odds ratios (ORs). Aim The aim of this study was to quantify the association between sex and H. pylori infection using controls from 14 studies from the Stomach Cancer Pooling (StoP) Project. Participants and methods H. pylori infection was defined based on IgG serum antibody titers or multiplex serology. Participants were also classified as infe…

Gastritis AtrophicMalemedicine.medical_specialtyconsortiumRisk AssessmentHelicobacter InfectionsSerology03 medical and health sciencesSex Factors0302 clinical medicineAtrophyRisk FactorsInternal medicinePrevalencesexHumansMedicinepooled analysiSerologic TestsStomach cancerAgedHelicobacter pyloriHepatologybiologybusiness.industryStomachGastroenterologyindividual participant dataPublication biasOdds ratioMiddle AgedHelicobacter pyloribiology.organism_classificationmedicine.diseaseAntibodies BacterialConfidence intervalImmunoglobulin G030220 oncology & carcinogenesisMeta-analysisFemale030211 gastroenterology & hepatologyAtrophybusinessEuropean Journal of Gastroenterology & Hepatology
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Association of maternal prenatal smoking GFI1-locus and cardio-metabolic phenotypes in 18,212 adults

2018

Background: DNA methylation at the GFI1-locus has been repeatedly associated with exposure to smoking from the foetal period onwards. We explored whether DNA methylation may be a mechanism that links exposure to maternal prenatal smoking with offspring's adult cardio-metabolic health.Methods: We meta-analysed the association between DNA methylation at GFI1-locus with maternal prenatal smoking, adult own smoking, and cardio-metabolic phenotypes in 22 population-based studies from Europe, Australia, and USA (n= 18,212). DNA methylation at the GFI1-locus was measured in whole-blood. Multivariable regression models were fitted to examine its association with exposure to prenatal and own adult s…

Genetics and Molecular Biology (all)MaleNetherlands Twin Register (NTR)0301 basic medicineResearch paperGFI1 protein humanGFI1-locusraskausResearch & Experimental Medicinecardio-metabolic phenotypesBiochemistryEpigenesis GeneticGLOBAL Meth QTL Consortium0302 clinical medicinePregnancySmoke030212 general & internal medicinematernal prenatal smokingDNA METHYLATIONmedia_commonRISK2. Zero hungereducation.field_of_studySmokingta3142General MedicineMiddle Agedgenetics [Transcription Factors]3. Good healthDNA-Binding ProteinsPhenotypeMedicine Research & ExperimentalCARDIOVASCULAR-DISEASEepigenetiikkaPopulation SurveillancePrenatal Exposure Delayed EffectsDNA methylation/dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_beingFemaleDisease SusceptibilityBIOS ConsortiumMedical GeneticsLife Sciences & BiomedicineAdultmedicine.medical_specialtyOffspringBirth weightPopulationMothersgenetics [DNA-Binding Proteins]ta3111MethylationGeneral Biochemistry Genetics and Molecular BiologyDIET03 medical and health sciencesMedicine General & InternalSDG 3 - Good Health and Well-beingtupakointiGeneral & Internal MedicineInternal medicine/dk/atira/pure/keywords/cohort_studies/netherlands_twin_register_ntr_medicinemedia_common.cataloged_instanceHumansddc:610adverse effects [Maternal Exposure]EXPOSUREEpigeneticsEuropean unioneducationMedicinsk genetikEPIGENOME-WIDE ASSOCIATIONPregnancyBiochemistry Genetics and Molecular Biology (all)Science & Technologybusiness.industryadverse effects [Smoking]DNA Methylationta3121medicine.diseaseBIRTH-WEIGHT030104 developmental biologyEndocrinologyGenetic Locisydän- ja verisuonitauditCpG IslandsCIGARETTE-SMOKINGCESSATIONEnergy Metabolismmetabolism [Myocardium]businessBody mass indexBiomarkersTranscription FactorsEBioMedicine
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Spatial discontinuity of Optomotor-blind expression in the Drosophila wing imaginal disc disrupts epithelial architecture and promotes cell sorting

2010

Abstract Background Decapentaplegic (Dpp) is one of the best characterized morphogens, required for dorso-ventral patterning of the Drosophila embryo and for anterior-posterior (A/P) patterning of the wing imaginal disc. In the larval wing pouch, the Dpp target gene optomotor-blind (omb) is generally assumed to be expressed in a step function above a certain threshold of Dpp signaling activity. Results We show that the transcription factor Omb forms, in fact, a symmetrical gradient on both sides of the A/P compartment boundary. Disruptions of the Omb gradient lead to a re-organization of the epithelial cytoskeleton and to a retraction of cells toward the basal membrane suggesting that the O…

GeneticsWinganimal structuresbiologyDecapentaplegicMorphogenesisNerve Tissue ProteinsCell sortingbiology.organism_classificationCell biologyImaginal discDrosophila melanogasterlcsh:Biology (General)Research articleAnimalsDrosophila ProteinsWings AnimalCompartment (development)Drosophila melanogasterT-Box Domain Proteinslcsh:QH301-705.5Drosophila ProteinSignal TransductionDevelopmental BiologyBMC Developmental Biology
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Sexual selection and intelligence: Does sexual reproduction drive the evolution of intelligence?

2009

Abstract The basal hypothesis discussed here is the idea that brain architecture could be plastic on a very basal, genetic level due to sexual recombination and reassortment of alleles of genes related to brain development, e.g., neuronal cell adhesion molecules (NCAMs) and others. The role of sexual reassortment leads the study of brain development, species behavior and intelligence to a new version of the so-called “Red Queen Hypothesis”: using the mechanism described here, a kind of runaway selection mechanism seems to arise. Even if NCAMs are almost constant within an individual, they seem to act very differently at the population level and so the role of reassorting polymorphic NCAM- (…

Geneticseducation.field_of_studyMechanism (biology)ReassortmentEvolution of human intelligencePopulationMedicine (miscellaneous)BiologyAgricultural and Biological Sciences (miscellaneous)Biochemistry Genetics and Molecular Biology (miscellaneous)Sexual reproductionnervous systemRed Queen hypothesisSexual selectioneducationSelection (genetic algorithm)Bioscience Hypotheses
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Survival relative to new and ancestral host plants, phytoplasma infection, and genetic constitution in host races of a polyphagous insect disease vec…

2014

Dissemination of vectorborne diseases depends strongly on the vector's host range and the pathogen's reservoir range. Because vectors interact with pathogens, the direction and strength of a vector's host shift is vital for understanding epidemiology and is embedded in the framework of ecological specialization. This study investigates survival in host-race evolution of a polyphagous insect disease vector, Hyalesthes obsoletus, whether survival is related to the direction of the host shift (from field bindweed to stinging nettle), the interaction with plant-specific strains of obligate vectored pathogens/symbionts (stolbur phytoplasma), and whether survival is related to genetic differentia…

Geneticsstolbur phytoplasmaEcologyObligateHost (biology)tritrophic interactionAssortative matingBiologybiology.organism_classificationmicrosatelliteshost-race evolutionRace (biology)PhytoplasmaGene–behavior interactionVector (epidemiology)Hyalesthes obsoletusPathogenEcology Evolution Behavior and SystematicsOriginal ResearchNature and Landscape ConservationMaladaptationEcology and Evolution
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Mosaic hepatitis B virus core particles presenting the complete preS sequence of the viral envelope on their surface

2004

The sequence of the preS domain of the hepatitis B virus (HBV, genotype D) envelope was inserted into the major immunodominant region (MIR) of the C-terminally truncated HBV core (HBc) protein. In Escherichia coli, the HBc–preS fusion protein was partially soluble and did not produce particles. Co-expression of the wild-type HBc as a helper protein along with the fusion protein led to the formation of mosaic HBc particles that exhibited HBc, preS1 and preS2 antigenicity. Two alternative combinations of medium- and high-copy plasmids were used for co-expression of fusion and helper proteins, in an attempt to improve mosaic particle production. However, the preS fusion content of the particle…

Hepatitis B virusAntigenicityvirusesAntibodies ViralProtein Engineeringmedicine.disease_causeVirusMiceViral Envelope ProteinsOrthohepadnavirusViral envelopeVirologyEscherichia colimedicineAnimalsProtein PrecursorsHepatitis B virusHepatitis B Surface AntigensbiologyViral Core Proteinsvirus diseasesProtein engineeringHepatitis Bbiology.organism_classificationVirologyFusion proteindigestive system diseasesHepadnaviridaeFemaleImmunizationReassortant VirusesPlasmidsJournal of General Virology
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Hepatitis B virus maturation is sensitive to functional inhibition of ESCRT-III, Vps4, and gamma 2-adaptin.

2007

ABSTRACT Hepatitis B virus (HBV) is an enveloped DNA virus that presumably buds at intracellular membranes of infected cells. HBV budding involves two endocytic host proteins, the ubiquitin-interacting adaptor γ2-adaptin and the Nedd4 ubiquitin ligase. Here, we demonstrate that HBV release also requires the cellular machinery that generates internal vesicles of multivesicular bodies (MVBs). In order to perturb the MVB machinery in HBV-replicating liver cells, we used ectopic expression of dominant-negative mutants of different MVB components, like the ESCRT-III complex-forming CHMP proteins and the Vps4 ATPases. Upon coexpression of mutated CHMP3, CHMP4B, or CHMP4C forms, as well as of ATPa…

Hepatitis B virusVacuolar Proton-Translocating ATPasesEndosomeImmunologyEndocytic cycleVesicular Transport Proteinsmacromolecular substancesEndosomesmedicine.disease_causeMicrobiologyESCRTVirusCell LineViral ProteinsVirologymedicineHumansAdaptor Protein Complex gamma SubunitsHepatitis B virusAdenosine TriphosphatasesMicroscopy ConfocalbiologyEndosomal Sorting Complexes Required for TransportVirus AssemblyDNA virusMolecular biologyUbiquitin ligaseCell biologyGenome Replication and Regulation of Viral Gene ExpressionMicroscopy FluorescenceInsect Sciencebiology.proteinHepatocytesATPases Associated with Diverse Cellular ActivitiesEctopic expressionJournal of virology
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