Search results for "species distribution"
showing 10 items of 132 documents
Life history traits to predict biogeographic species distributions in bivalves
2015
Organismal fecundity (F) and its relationship with body size (BS) are key factors in predicting species distribution under current and future scenarios of global change. A functional trait-based dynamic energy budget (FT-DEB) is proposed as a mechanistic approach to predict the variation of F and BS as function of environmental correlates using two marine bivalves as model species (Mytilus galloprovincialis and Brachidontes pharaonis). Validation proof of model skill (i.e., degree of correspondence between model predictions and field observations) and stationarity (i.e., ability of a model generated from data collected at one place/time to predict processes at another place/time) was provid…
Predicting the current and future global distribution of the invasive freshwater hydrozoan Craspedacusta sowerbii
2021
AbstractThe freshwater jellyfish Craspedacusta sowerbii is one of the most widespread invasive species, but its global distribution remains uncertain due to ephemeral appearances and general lack of information in various aquatic environments. The aim of this study was to map current and future distributions (2050 and 2100) using Species Distribution Models allowing to visualize the habitat suitability and make projections of its changes under potential climate change scenarios. Except in Oceania where the range decreased, an expansion of C. sowerbii was projected during the next century under modeled future scenarios being most intensive during the first half of the century. The present st…
Morphologically similar but not closely related: the long-spored species of Subulicystidium (Trechisporales, Basidiomycota)
2020
AbstractSpecies boundaries and geographic distribution of corticioid fungi (resupinate Basidiomycota) are often poorly known. Our recent study on Subulicystidium showed that species diversity in this genus is at least twice as high as previously recognized. This re-estimation of the species diversity was based on a study of only a part of the genus. The present study sheds light on molecular and morphological diversity of three more species. We generated 27 ITS and 24 28S nuclear ribosomal DNA sequences from 49 specimens labelled as Subulicystidium cochleum, S. longisporum and S. perlongisporum and collected in distant geographic localities. We assessed pairwise dissimilarities and phylogen…
Analyzing environmental‐trait interactions in ecological communities with fourth‐corner latent variable models
2021
In ecological community studies it is often of interest to study the effect of species related trait variables on abundances or presence-absences. Specifically, the interest may lay in the interactions between environmental and trait variables. An increasingly popular approach for studying such interactions is to use the so-called fourth-corner model, which explicitly posits a regression model where the mean response of each species is a function of interactions between covariate and trait predictors (among other terms). On the other hand, many of the fourth-corner models currently applied in the literature are too simplistic to properly account for variation in environmental and trait resp…
Bioclimatic atlas of the terrestrial Arctic
2023
AbstractThe Arctic is the region on Earth that is warming at the fastest rate. In addition to rising means of temperature-related variables, Arctic ecosystems are affected by increasingly frequent extreme weather events causing disturbance to Arctic ecosystems. Here, we introduce a new dataset of bioclimatic indices relevant for investigating the changes of Arctic terrestrial ecosystems. The dataset, called ARCLIM, consists of several climate and event-type indices for the northern high-latitude land areas > 45°N. The indices are calculated from the hourly ERA5-Land reanalysis data for 1950–2021 in a spatial grid of 0.1 degree (~9 km) resolution. The indices are provided in three subsets…
Fragmentation and Coverage Variation in Viral Metagenome Assemblies, and Their Effect in Diversity Calculations
2015
Metagenomic libraries consist of DNA fragments from diverse species, with varying genome size and abundance. High-throughput sequencing platforms produce large volumes of reads from these libraries, which may be assembled into contigs, ideally resembling the original larger genomic sequences. The uneven species distribution, along with the stochasticity in sample processing and sequencing bias, impacts the success of accurate sequence assembly. Several assemblers enable the processing of viral metagenomic data de novo, generally using overlap layout consensus or de Bruijn graph approaches for contig assembly. The success of viral genomic reconstruction in these datasets is limited by the de…
Spatial Bayesian Modeling Applied to the Surveys of Xylella fastidiosa in Alicante (Spain) and Apulia (Italy)
2020
The plant-pathogenic bacterium Xylella fastidiosa was first reported in Europe in 2013, in the province of Lecce, Italy, where extensive areas were affected by the olive quick decline syndrome, caused by the subsp. pauca. In Alicante, Spain, almond leaf scorch, caused by X. fastidiosa subsp. multiplex, was detected in 2017. The effects of climatic and spatial factors on the geographic distribution of X. fastidiosa in these two infested regions in Europe were studied. The presence/absence data of X. fastidiosa in the official surveys were analyzed using Bayesian hierarchical models through the integrated nested Laplace approximation (INLA) methodology. Climatic covariates were obtained from …
Modeling the Spatial Distribution of Xylella fastidiosa: A Nonstationary Approach with Dispersal Barriers
2022
Spatial species distribution models often assume isotropy and stationarity, implying that spatial dependence is direction-invariant and uniform throughout the study area. However, these assumptions are violated when dispersal barriers are present. Despite this, the issue of nonstationarity has been little explored in the context of plant health. The objective of this study was to evaluate the influence of barriers in the distribution of Xylella fastidiosa in the demarcated area in Alicante, Spain. Occurrence data from 2018 were analyzed through spatial Bayesian hierarchical models. The stationary model, illustrating a scenario without control interventions or geographical features, was com…
Distribution models and environmental changes : Application to echinoid faunas in the Southern Ocean and ecoregionalization
2018
Current environmental changes, which impact marine environments, cover major scientific and societal issues, especially as these environmental changes are expected to accelerate along the 21st century. Understanding and forecasting the response of marine biodiversity to these changes is a pregnant scientific issue. Biogeographic and macroecological approaches provide a scientific framework for that purpose. They allow describing and understanding species distribution patterns at large spatial scale as well as estimating their potential shift with regards to environmental change. This is particularly true in the Southern Ocean, where the effects of climate change are already occurring and wh…
Modéliser la réponse des espèces marines antarctiques aux changements environnementaux. Méthodes, applications et limites.
2021
Among tools that are used to fill knowledge gaps on natural systems, ecological modelling has been widely applied during the last two decades. Ecological models are simple representations of a complex reality. They allow to highlight environmental drivers of species ecological niche and better understand species responses to environmental changes. However, applying models to Southern Ocean benthic organisms raises several methodological challenges. Species presence datasets are often aggregated in time and space nearby research stations or along main sailing routes. Data are often limited in number to correctly describe species occupied space and physiology. Finally, environmental datasets …