Search results for "specificity"

showing 10 items of 2234 documents

Species-specific genes under selection characterize the co-evolution of slavemaker and host lifestyles.

2017

Background The transition to a parasitic lifestyle entails comprehensive changes to the selective regime. In parasites, genes encoding for traits that facilitate host detection, exploitation and transmission should be under selection. Slavemaking ants are social parasites that exploit the altruistic behaviour of their hosts by stealing heterospecific host brood during raids, which afterwards serve as slaves in slavemaker nests. Here we search for evidence of selection in the transcriptomes of three slavemaker species and three closely related hosts. We expected selection on genes underlying recognition and raiding or defense behaviour. Analyses of selective forces in species with a slavemak…

Likelihood FunctionsBehavior AnimalAntsBiological EvolutionHost-Parasite InteractionsPositive selectionTemnothoraxCo-evolutionGene Expression RegulationSpecies SpecificitySocial parasitesAnimalsSelection GeneticPhylogenyResearch ArticleBMC evolutionary biology
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Species cohesion despite extreme inbreeding in a social spider.

2011

Colonial social spiders experience extreme inbreeding and highly restricted gene flow between colonies; processes that question the genetic cohesion of geographically separated populations and which could imply multiple origins from predecessors with limited gene flow. We analysed species cohesion and the potential for long-distance dispersal in the social spider Stegodyphus dumicola by studying colony structure in eastern South Africa and the cohesion between this population and Namibian populations previously published. Data from both areas were (re)analysed for historic demographic parameters. Eastern South African S. dumicola were closely related to an east Namibian lineage, showing coh…

Lineage (evolution)PopulationMolecular Sequence DataPopulation DynamicsColonialismDNA MitochondrialGene flowSouth AfricaSpecies SpecificityCohesion (geology)AnimalsCluster AnalysisInbreedingeducationSocial BehaviorEcology Evolution Behavior and SystematicsDemographyeducation.field_of_studyLikelihood FunctionsbiologyBase SequenceModels GeneticEcologyGenetic VariationSpidersSequence Analysis DNAbiology.organism_classificationNamibiaGenetics PopulationHaplotypesBiological dispersalInbreedingSocial spiderJournal of evolutionary biology
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High Performance Liquid Chromatografy-Mass Spectrometry based chemometric characterization of olive oils

2005

In this study the effective discrimination of extra virgin olive oils is described using HPLC-MS, combined with chemometric evaluation. The presented method is simple since the diluted oil sample is directly injected into the system, without any preliminary chemical derivatization or purification step. Separation of diacylglycerols, triacylglycerols and sterols occurs within 20 min and is achieved using an octadecyl-silica column. Detection is performed by positive APCI mass spectrometry which provided sensitivity to detect over 50 compounds in the sample. After extraction of data, stepwise discriminant function analysis is used to select the variables with the highest discriminative power.…

Linear discriminant analysiAnalytical chemistryAtmospheric-pressure chemical ionizationCross validationMass spectrometrySensitivity and SpecificityBiochemistryHigh-performance liquid chromatographyMass SpectrometryAnalytical ChemistryDiglyceridesChemometricschemistry.chemical_compoundLiquid chromatography–mass spectrometryPlant OilsDerivatizationChromatography High Pressure LiquidTriglyceridesChromatographyOrganic ChemistryOil cultivarDiscriminant AnalysisPhytosterolsReproducibility of ResultsGeneral MedicineLinear discriminant analysisHPLC–MSVegetable oilchemistryOlive oil
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Hemispheric differences in specificity effects in talker identification

2010

In the visual domain, Marsolek and colleagues (1999, 2008) have found support for two dissociable and parallel neural subsystems underlying object and shape recognition: an abstract-category subsystem that operates more effectively in the left cerebral hemisphere (LH), and a specific-exemplar subsystem that operates more effectively in the right cerebral hemisphere (RH). Evidence of this asymmetry has been observed in priming specificity for linguistic (words, pseudoword forms) and nonlinguistic (objects) stimuli. In the auditory domain, the authors previously found hemispheric asymmetries in priming effects for linguistic (spoken words) and nonlinguistic (environmental sounds) stimuli. In …

Linguistics and Languagemedicine.medical_specialtyProperty (programming)Cervell--Localització de funcionsmedia_common.quotation_subjectObject (grammar)Experimental and Cognitive PsychologyAudiologyLanguage and LinguisticsPerceptionmedicineHumansDominance Cerebralmedia_commonCommunicationbusiness.industryHemisphere asymmetriesReconeixement de la parlaTalker identificationSensory SystemsSemanticsPseudowordAcoustic StimulationPattern Recognition VisualPrimingLateralitySpeech PerceptionTest phaseIdentification (psychology)Specificity effectsCuesPsychologybusinessPriming (psychology)Attention, Perception, & Psychophysics
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Norovirus in captive lion cub (Panthera leo)

2007

African lions (Panthera leo) are susceptible to viral diseases of domestic carnivores, including feline calici-virus infection. We report the identification of a novel enteric calicivirus, genetically related to human noroviruses of genogroup IV, in a lion cub that died of severe hemorrhagic enteritis.

LionsMicrobiology (medical)GenotypeEpidemiologyanimal diseasesvirusesMolecular Sequence Datalcsh:MedicineDNA FragmentationPanthera leomedicine.disease_causelcsh:Infectious and parasitic diseasesEnteritisFatal Outcomefluids and secretionsSpecies Specificitybiology.animalmedicineAnimalslcsh:RC109-216Amino Acid SequenceFeline calicivirus infectionenteritisPhylogenyCaliciviridae Infectionsbiologylcsh:RNorovirusZoonosisDispatchCaliciviruscalicivirusvirus diseaseszoonosismedicine.diseaseVirologydigestive system diseasesGastroenteritisInfectious DiseasesCaliciviridae InfectionsHemorrhagic enteritisAnimals NewbornDNA ViralNorovirusAnimals ZooPantheraAfrican lion
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Phylogeography of lions (Panthera leossp.) reveals three distinct taxa and a late Pleistocene reduction in genetic diversity

2009

Lions were the most widespread carnivores in the late Pleistocene, ranging from southern Africa to the southern USA, but little is known about the evolutionary relationships among these Pleistocene populations or the dynamics that led to their extinction. Using ancient DNA techniques, we obtained mitochondrial sequences from 52 individuals sampled across the present and former range of lions. Phylogenetic analysis revealed three distinct clusters: (i) modern lions, Panthera leo; (ii) extinct Pleistocene cave lions, which formed a homogeneous population extending from Europe across Beringia (Siberia, Alaska and western Canada); and (iii) extinct American lions, which formed a separate popula…

LionsPleistocenePopulationcave lionDNA MitochondrialBeringiaEvolution MolecularmegafaunaSpecies SpecificityMegafaunaAmerican lionbiology.animalGeneticsAnimalseducationancient DNAPhylogenyEcology Evolution Behavior and SystematicsPanthera leo spelaeaeducation.field_of_studyBeringiaGeographybiologyextinctionFossilsEcologyGenetic VariationSequence Analysis DNAsocial sciencesbiology.organism_classificationhumanitiesAmerican lionPhylogeographyGenetics PopulationPantheraMolecular Ecology
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Potassium-inhibited processing of IL-1 beta in human monocytes.

1995

Agents that deplete cells of K+ without grossly disrupting the plasma membrane were found to stimulate the cleavage of pro-interleukin (IL)-1 beta to mature IL-1 beta. Agents examined in this study included staphylococcal alpha-toxin and gramicidin, both of which selectively permeabilize plasma membranes for monovalent ions, the ionophores nigericin and valinomycin, and the Na+/K+ ATPase inhibitor ouabain. K+ depletion by brief hypotonic shock also triggered processing of pro-IL-1 beta. The central role of K+ depletion for inducing IL-1 beta maturation was demonstrated in cells permeabilized with alpha-toxin: processing of pro-IL-1 beta was totally blocked when cells were suspended in mediu…

LipopolysaccharidesCell Membrane PermeabilityNigericinATPaseEnzyme-Linked Immunosorbent AssayMonocytesGeneral Biochemistry Genetics and Molecular BiologyOuabainchemistry.chemical_compoundValinomycinAntibody SpecificityPotassium Channel BlockersExtracellularmedicineHumansChannel blockerProtein PrecursorsNa+/K+-ATPaseMolecular BiologyDose-Response Relationship DrugGeneral Immunology and MicrobiologybiologyGeneral NeurosciencechemistryBiochemistryType C PhospholipasesPotassiumBiophysicsbiology.proteinProtein Processing Post-TranslationalIntracellularResearch ArticleInterleukin-1medicine.drugThe EMBO Journal
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Time Response of Oxidative/Nitrosative Stress and Inflammation in LPS-Induced Endotoxaemia—A Comparative Study of Mice and Rats

2017

Sepsis is a severe and multifactorial disease with a high mortality rate. It represents a strong inflammatory response to an infection and is associated with vascular inflammation and oxidative/nitrosative stress. Here, we studied the underlying time responses in the widely used lipopolysaccharide (LPS)-induced endotoxaemia model in mice and rats. LPS (10 mg/kg; from Salmonella Typhosa) was intraperitoneally injected into mice and rats. Animals of every species were divided into five groups and sacrificed at specific points in time (0, 3, 6, 9, 12 h). White blood cells (WBC) decreased significantly in both species after 3 h and partially recovered with time, whereas platelet decrease did no…

LipopolysaccharidesMale0301 basic medicinesepsis; time response; inflammation; oxidative stress; endotoxaemia; mouse; ratLipopolysaccharideNitric Oxide Synthase Type IIBacteremia030204 cardiovascular system & hematologymedicine.disease_causelcsh:ChemistrysepsisendotoxaemiaHemoglobinsLeukocyte CountMicechemistry.chemical_compound0302 clinical medicineoxidative stressratPlateletlcsh:QH301-705.5SpectroscopyGeneral MedicineComputer Science ApplicationsRespiratory burstP-SelectinSalmonella Infectionsmedicine.symptommedicine.medical_specialtyVascular Cell Adhesion Molecule-1InflammationOxidative phosphorylationArticleCatalysisInorganic ChemistrySepsis03 medical and health sciencesSpecies Specificitytime responseInternal medicineReaction TimemedicineAnimalsRats WistarPhysical and Theoretical ChemistryMolecular BiologymouseInterleukin-6Platelet CountTumor Necrosis Factor-alphabusiness.industryOrganic Chemistrymedicine.diseaseRatsMice Inbred C57BL030104 developmental biologyEndocrinologylcsh:Biology (General)lcsh:QD1-999chemistryinflammationImmunologyHemoglobinbusinessOxidative stressInternational Journal of Molecular Sciences
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Characterization of small HSPs from Anemonia viridis reveals insights into molecular evolution of alpha crystallin genes among cnidarians.

2014

Gene family encoding small Heat-Shock Proteins (sHSPs containing α-crystallin domain) are found both in prokaryotic and eukaryotic organisms; however, there is limited knowledge of their evolution. In this study, two small HSP genes termed AvHSP28.6 and AvHSP27, both organized in one intron and two exons, were characterised in the Mediterranean snakelocks anemone Anemonia viridis. The release of the genome sequence of Hydra magnipapillata and Nematostella vectensis enabled a comprehensive study of the molecular evolution of α-crystallin gene family among cnidarians. Most of the H. magnipapillata sHSP genes share the same gene organization described for AvHSP28.6 and AvHSP27, differing from …

LipopolysaccharidesMarine and Aquatic SciencesGene ExpressionCnidarianSea anemoneGenomeAnemoniaGene duplicationProtein Isoformsalpha-CrystallinsPhylogenyGenomic organizationGeneticsMultidisciplinarybiologyReverse Transcriptase Polymerase Chain ReactionQTemperatureRMedicineAnemonia viridiSmall HSP; Anemonia viridis; Cnidarians; molecular evolutionResearch ArticleScienceMolecular Sequence DataMarine BiologySmall HSPEvolution MolecularCnidariaSpecies SpecificityMolecular evolutionMetals HeavySequence Homology Nucleic AcidAnimalsGene familyAmino Acid SequenceMolecular BiologyGeneEvolutionary BiologyBase SequenceSequence Homology Amino Acidmolecular evolutionGene Expression ProfilingEcology and Environmental SciencesBiology and Life SciencesAquatic EnvironmentsCell Biologybiology.organism_classificationHeat-Shock Proteins SmallSea AnemonesEarth SciencesPLoS ONE
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Ciona intestinalis peroxinectin is a novel component of the peroxidase–cyclooxygenase gene superfamily upregulated by LPS

2013

Peroxinectins function as hemoperoxidase and cell adhesion factor involved in invertebrate immune reaction. In this study, the ascidian (Ciona intestinalis) peroxinectin gene (CiPxt) and its expression during the inflammatory response have been examined. CiPxt is a new member of the peroxidase-cyclooxygenase gene superfamily that contains both the peroxidase domain and the integrin KGD (Lys-Gly-Asp) binding motif. A phylogenetic tree showed that CiPxt is very close to the chordate group and appears to be the outgroup of mammalian MPO, EPO and TPO clades. The CiPxt molecular structure model resulted superimposable to the human myeloperoxidase. The CiPxt mRNA expression is upregulated by LPS …

LipopolysaccharidesModels MolecularHemocytesLPSAmino Acid MotifsMolecular Sequence DataPeroxinectinImmunologyIntegrinSettore BIO/05 - ZoologiaChordatePeroxinectin;Peroxidase;Inflammation;LPS;Ciona intestinalisAnimalsCiona intestinalisAmino Acid SequenceRNA MessengerCell adhesionPhylogenyPeroxidaseInflammationRegulation of gene expressionSequence Homology Amino AcidbiologyCell adhesion moleculeAnimal Structuresbiology.organism_classificationMolecular biologyImmunity InnateProtein Structure TertiaryCiona intestinalisGene Expression RegulationPeroxidasesOrgan SpecificityMyeloperoxidaseembryonic structuresImmunologybiology.proteinCell Adhesion MoleculesDevelopmental BiologyEndostyleDevelopmental & Comparative Immunology
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