Search results for "structure analysis"

showing 10 items of 65 documents

Über Chalkogenolate, LXIX. Darstellung und Struktur des 3,4,5‐Tris(methylthio)‐1,2‐dithiolium‐jodids — [(H 3 CS) 3 C 3 S 2 ] + J −

1974

Darstellung und Eigenschaften von [(H3CS)3C3S2]+ J− (4) werden beschrieben. Die Rontgen -strukturanalyse ergibt eindeutige Hinweise auf Ladungswechselwirkungen zwischen den Ringschwefelatomen und dem Jod. JS-Bindungslangen: 3.442 und 3.394 A. On Chalcogenolates, LXIX. Preparation and Crystal Structure of 3,4,5-Tris(methylthio)-1,2-dithiolium Iodide, [(H3CS)3C3S]+ J− The preparation and properties of [(H3CS)3C3S2]+ I− (4) are described. The existence of charge transfer relations between ring-sulfur and iodine is verified by X-ray structure analysis. JS distances are 3.442 and 3.394 A.

Inorganic Chemistrychemistry.chemical_classificationStructure analysischemistryIodidechemistry.chemical_elementCrystal structureIodineMedicinal chemistryChemische Berichte
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Repetitive‐Synthesis of Bulky Dendrimers – A Reversibly Photoactive Dendrimer with Six Azobenzene Side Chains

1993

Dendrimers with bulky repeating units containing up to 43 benzene rings (in 9) have been obtained by using a repetitive divergent synthetic strategy (three generations). The new functional dendrimer 13 containing six azobenzene units at the periphery was synthesized allowing a reversible switching of the shape and size of the molecule upon irradiation. An X-ray structure analysis of the dendritic molecule 3a shows the inclusion of acetonitrile.

Inorganic Chemistrychemistry.chemical_compoundStructure analysisAzobenzeneChemistryDendrimerPolymer chemistrySupramolecular chemistrySide chainMoleculeAcetonitrileDivergent synthesisChemische Berichte
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Human Hsp60 with Its Mitochondrial Import Signal Occurs in Solution as Heptamers and Tetradecamers Remarkably Stable over a Wide Range of Concentrati…

2014

It has been established that Hsp60 can accumulate in the cytosol in various pathological conditions, including cancer and chronic inflammatory diseases. Part or all of the cytosolic Hsp60 could be naive, namely, bear the mitochondrial import signal (MIS), but neither the structure nor the in solution oligomeric organization of this cytosolic molecule has still been elucidated. Here we present a detailed study of the structure and self-organization of naive cytosolic Hsp60 in solution. Results were obtained by different biophysical methods (light and X ray scattering, single molecule spectroscopy and hydrodynamics) that all together allowed us to assay a wide range of concentrations of Hsp60…

LightCancer Treatmentlcsh:MedicinePlasma protein bindingMitochondrionBiochemistrySmall-Angle ScatteringCell-free systemScatteringchemistry.chemical_compoundCytosolProtein structureBasic Cancer ResearchMacromolecular Structure AnalysisMedicine and Health SciencesScattering RadiationHsp60 Gro EL Recombinant proteinslcsh:ScienceAdenosine TriphosphatasesMultidisciplinaryAqueous solutionMolecular StructurePhysicsElectromagnetic RadiationHydrolysisRecombinant ProteinsMitochondriaChemistryMonomerOncologyBiochemistryPhysical SciencesInterdisciplinary PhysicsHSP60Research ArticleProtein BindingProtein Structureanimal structuresBiophysicschemical and pharmacologic phenomenaBiologycomplex mixturesMitochondrial ProteinsHumansProtein InteractionsMolecular BiologyInflammationChemical PhysicsCell-Free Systemlcsh:RfungiLight ScatteringBiology and Life SciencesProteinsProtein ComplexesChaperonin 60Chaperone ProteinsCytosolSpectrometry FluorescencechemistryMolecular Complexeslcsh:QPLoS ONE
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Acetylcholine-binding protein in the hemolymph of the planorbid snail Biomphalaria glabrata is a pentagonal dodecahedron (60 subunits).

2012

Nicotinic acetylcholine receptors (nAChR) play important neurophysiological roles and are of considerable medical relevance. They have been studied extensively, greatly facilitated by the gastropod acetylcholine-binding proteins (AChBP) which represent soluble structural and functional homologues of the ligand-binding domain of nAChR. All these proteins are ring-like pentamers. Here we report that AChBP exists in the hemolymph of the planorbid snail Biomphalaria glabrata (vector of the schistosomiasis parasite) as a regular pentagonal dodecahedron, 22 nm in diameter (12 pentamers, 60 active sites). We sequenced and recombinantly expressed two ∼25 kDa polypeptides (BgAChBP1 and BgAChBP2) wit…

Macromolecular AssembliesProtein StructureProtein FoldingScienceBiophysicsBiochemistryProtein ChemistryHomology (biology)Ion ChannelsProtein Structure Secondarylaw.inventionDodecahedronAcetylcholine bindinglawHemolymphHemolymphMacromolecular Structure AnalysisBiomphalaria glabrataAnimal PhysiologyAnimalsBiomacromolecule-Ligand InteractionsBiologyAcetylcholine receptorMultidisciplinaryHemoproteinsbiologyBiomphalariaQRActive siteProteinsComputational BiologyAnatomybiology.organism_classificationRecombinant ProteinsAcetylcholineProtein Structure TertiaryBiochemistryAcetylcholine Receptorsbiology.proteinRecombinant DNAMedicineCarrier ProteinsZoologyResearch ArticlePLoS ONE
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Construction of Chimeric Dual-Chain Avidin by Tandem Fusion of the Related Avidins

2011

BackgroundAvidin is a chicken egg-white protein with high affinity to vitamin H, also known as D-biotin. Many applications in life science research are based on this strong interaction. Avidin is a homotetrameric protein, which promotes its modification to symmetrical entities. Dual-chain avidin, a genetically engineered avidin form, has two circularly permuted chicken avidin monomers that are tandem-fused into one polypeptide chain. This form of avidin enables independent modification of the two domains, including the two biotin-binding pockets; however, decreased yields in protein production, compared to wt avidin, and complicated genetic manipulation of two highly similar DNA sequences i…

Macromolecular Assemblieslcsh:MedicineBiosensing TechniquesPolymerase Chain ReactionBiochemistryProtein Structure Secondarychemistry.chemical_compoundProtein structureBiotinMacromolecular Structure AnalysisProtein biosynthesisBiomacromolecule-Ligand InteractionsSurface plasmon resonancelcsh:Science0303 health sciencesMultidisciplinarybiologyrespiratory systemRecombinant ProteinsBiochemistryBiotinylationChromatography GelBiophysic Al SimulationsResearch ArticleProtein StructureStructural similarityRecombinant Fusion Proteins030303 biophysicsBiophysicsBiotinMolecular Dynamics SimulationBiokemia solu- ja molekyylibiologia - Biochemistry cell and molecular biology03 medical and health sciencesstomatognathic systemDefense ProteinsEscherichia coliAnimalsGene familyProtein InteractionsBiology030304 developmental biologylcsh:RProteinsComputational BiologySurface Plasmon ResonanceAvidinchemistrySmall MoleculesFermentationbiology.proteinlcsh:QChickensAvidinPLoS ONE
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Stool Phospholipid Signature is Altered by Diet and Tumors

2014

Intake of saturated fat is a risk factor for ulcerative colitis (UC) and colon cancer. Changes in the microbiota have been implicated in the development of UC and colon cancer. The host and the microbiota generate metabolites that may contribute to or reflect disease pathogenesis. We used lipid class specific quantitative mass spectrometry to assess the phospholipid (PL) profile (phosphatidylcholine [PC], phosphatidylethanolamine [PE], phosphatidylinositol [PI], phosphatidylserine [PS]) of stool from mice fed a high fat (HFD) or control diet with or without induction of colitis-associated tumors using azoxymethane and dextran sodium sulfate. The microbiota was assessed using qPCR for severa…

MaleLifestyle Causes of CancerCarcinogenesisPhysiologySaturated fatlcsh:MedicineFeceschemistry.chemical_compound0302 clinical medicineMacromolecular Structure AnalysisMedicine and Health SciencesPrevotellalcsh:SciencePhospholipids0303 health sciencesLipid AnalysisMultidisciplinaryEcologybiologyMicrobiotaCancer Risk FactorsClostridium leptumPhosphatidylserineColitis3. Good healthPhysiological ParametersOncologyBiochemistryMedical MicrobiologyNutritional Correlates of CancerColonic NeoplasmsFemale030211 gastroenterology & hepatologyAnatomyResearch Articlemedicine.medical_specialtyColonPhospholipidGastroenterology and HepatologyDiet High-FatMicrobiologyMicrobial Ecology03 medical and health sciencesInternal medicineBiomarkers TumormedicineAnimalsObesityColitisMolecular Biology030304 developmental biologyColorectal CancerPhosphatidylethanolamineAzoxymethaneBody Weightlcsh:RBiology and Life SciencesCancers and Neoplasmsmedicine.diseasebiology.organism_classificationMice Inbred C57BLGastrointestinal TractEndocrinologychemistrylcsh:QMicrobiomePhysiological ProcessesDigestive SystemPLoS ONE
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Kinematic and head morphometric characterisation of spermatozoa from the Brown Caiman (Caiman crocodilus fuscus).

2019

The development of analytical methods for the evaluation of crocodilian semen is an important component for the assessment of male breeding soundness and the development of assisted breeding technology in this taxon. Computer-Assisted Semen Analysis (CASA) technology is becoming an increasingly common technique in seminal evaluations for animals but there has been no application of this technique for reptilian spermatozoa. The aim of this study was to analyse sperm kinematic and morphometric variables in Caiman crocodilus fuscus semen samples and to determine whether there were sperm subpopulations. Four ejaculates from four sexually mature captive caimans were used for this study. A CASA-M…

Maleendocrine systemStructure analysismedia_common.quotation_subjectZoologySemenSemen analysisBiology03 medical and health sciences0302 clinical medicineEndocrinologyFood AnimalsmedicineImage acquisitionAnimalsmedia_commonAlligators and Crocodiles030219 obstetrics & reproductive medicinemedicine.diagnostic_testReproduction0402 animal and dairy science04 agricultural and veterinary sciencesGeneral Medicine040201 dairy & animal scienceSpermSpermatozoaSexual reproductionBiomechanical PhenomenaSemen AnalysisSperm HeadAnimal Science and ZoologyReproductionAnimal reproduction science
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Preparation and Characterization of Composites Materials with Rubber Matrix and with Polyvinyl Chloride Addition (PVC)

2020

An important problem that arises at present refers to the increase in performances in the exploitation of the conveyor belts. Additionally, it is pursued to use some materials, which can be obtained by recycling rubber and PVC waste, in their structure. Thus, the research aimed at creating conveyor belts using materials obtained from the recycling of rubber and PVC waste. Under these conditions, conveyor belts were made that had in their structure two types of rubber and PVC, which was obtained by adding in certain proportions of reclaimed rubber and powder obtained from grinding rubber waste. In order to study the effect of adding PVC on properties, four types of conveyor belts were made, …

Materials sciencePolymers and Plasticsfinite element methodrubber02 engineering and technologyTensile strain010402 general chemistry01 natural sciencesArticlelcsh:QD241-441chemistry.chemical_compoundlcsh:Organic chemistryNatural rubberaccelerated agingComposite materialTextile reinforcementGeneral Chemistry021001 nanoscience & nanotechnologymaterials structure analysisAccelerated aging0104 chemical sciencesGrindingPolyvinyl chloridechemistryvisual_artvisual_art.visual_art_mediumpolyvinyl chloride0210 nano-technologyPolymers
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(19)F NMR screening of unrelated antimicrobial peptides shows that membrane interactions are largely governed by lipids.

2014

AbstractMany amphiphilic antimicrobial peptides permeabilize bacterial membranes via successive steps of binding, re-alignment and/or oligomerization. Here, we have systematically compared the lipid interactions of two structurally unrelated peptides: the cyclic β-pleated gramicidin S (GS), and the α-helical PGLa. 19F NMR was used to screen their molecular alignment in various model membranes over a wide range of temperatures. Both peptides were found to respond to the phase state and composition of these different samples in a similar way. In phosphatidylcholines, both peptides first bind to the bilayer surface. Above a certain threshold concentration they can re-align and immerse more dee…

Membrane lipidsAntimicrobial peptidesAmphiphilic antimicrobial peptidesLipid BilayersBiophysicsBiochemistryProtein Structure Secondarychemistry.chemical_compoundMembrane LipidsHumansAmino Acid SequenceProtein PrecursorsLipid bilayerNuclear Magnetic Resonance BiomolecularBacteriaBilayerPeripheral membrane proteinLipid compositionCell MembraneGramicidinBiological membraneRe-alignment in membraneCell BiologyMembraneBiochemistrychemistryGramicidinBiophysicsBacterial membranesSpontaneous curvatureSolid state 19F NMR structure analysis
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The soluble loop BC region guides, but not dictates, the assembly of the transmembrane cytochrome b6

2017

Studying folding and assembly of naturally occurring α-helical transmembrane proteins can inspire the design of membrane proteins with defined functions. Thus far, most studies have focused on the role of membrane-integrated protein regions. However, to fully understand folding pathways and stabilization of α–helical membrane proteins, it is vital to also include the role of soluble loops. We have analyzed the impact of interhelical loops on folding, assembly and stability of the heme-containing four-helix bundle transmembrane protein cytochrome b6 that is involved in charge transfer across biomembranes. Cytochrome b6 consists of two transmembrane helical hairpins that sandwich two heme mol…

Metabolic ProcessesProtein FoldingProtein StructureSurfactantsCell MembranesMaterials ScienceDetergentslcsh:MedicineHemeBiochemistrySpinacia oleraceaddc:570Macromolecular Structure AnalysisRNA stem-loop structure500 Natural sciences and mathematicsAmino Acid SequencePost-Translational ModificationEnzyme ChemistryRNA structurelcsh:ScienceMolecular BiologyMaterials by Attributelcsh:RMembrane ProteinsBiology and Life SciencesProteinsProteasesCell BiologyEnzymesNucleic acidsMetabolismCytochromes b6ProteolysisPhysical SciencesMutagenesis Site-DirectedEnzymologyCofactors (Biochemistry)RNAlcsh:Q500 NaturwissenschaftenCellular Structures and OrganellesDimerizationResearch Article
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