Search results for "structure-activity relationship"

showing 10 items of 743 documents

Getting new bronchodilator compounds from molecular topology.

2003

Abstract Molecular topology has been used to select new lead bronchodilator compounds. The main advantage of this method, as compared to others frequently used, is that it does not require a previous explicit knowledge of the mechanism of action (MOA) of the compounds analyzed. A large database (12,000 chemicals) has been examined in this study to find less than 5% compounds with bronchodilator activity. After removing those compounds already described as bronchodilators, we present here the results for 20 among these compounds, some of them showing other pharmacological activities. Some of the compounds selected in this study showed higher relaxation and higher potency than theophylline, w…

IndolesChemistrymedicine.drug_classMolecular ConformationPharmaceutical SciencePharmacologyModels TheoreticalReference drugBronchodilator AgentsStructure-Activity RelationshipPharmaceutical technologyEllagic AcidTheophyllineBronchodilatormedicinePotencyTheophyllineMolecular topologymedicine.drugEuropean journal of pharmaceutical sciences : official journal of the European Federation for Pharmaceutical Sciences
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Isoindolo[2,1-c]benzo[1,2,4]triazines: a new ring system with antiproliferative activity.

2006

Abstract A series of isoindolo-benzo-triazines of type 4 was obtained by diazotization of 2-(2-aminoaryl)-1-cyanoisoindoles 3a – j . All the synthesized derivatives were screened by the National Cancer Institute (NCI, Bethesda, USA), for in vitro antitumor activity against a 3-human cancer cell line panel consisting of MCF7 (breast), NCI-H460 (lung), and SF-268 (CNS). Derivatives 4a , f , i , j were selected to be evaluated in the full panel of about 50 human tumor cell lines derived from nine human cancer cell types and showed antiproliferative activity generally in the micromolar range. The most sensitive cell lines were: MOLT-4 and SR of the leukemia subpanel, A549/ATCC and EKVX of the n…

IndolesColorectal cancerClinical BiochemistryCellPharmaceutical ScienceAntineoplastic AgentsBiochemistryStructure-Activity RelationshipBreast cancerCell Line TumorNeoplasmsDrug DiscoverymedicineHumans3D-Mind Antiproliferative activity Isoindolo-benzotriazineMolecular BiologyCell ProliferationMolecular StructureChemistryTriazinesMelanomaOrganic ChemistryCancerStereoisomerismmedicine.diseaseLeukemiamedicine.anatomical_structureCell cultureImmunologyCancer researchMolecular MedicineDrug Screening Assays AntitumorOvarian cancerBioorganicmedicinal chemistry
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Total Synthesis of Phenanthroindolizidine Alkaloids by Combining Iodoaminocyclization with Free Radical Cyclization

2016

A concise and modular synthesis of phenanthroindolizidine alkaloids was achieved by combining iodoaminocylization with a free radical cyclization approach. The route described allowed the preparation of (±)-tylophorine, (±)-antofine, and (±)-deoxypergularinine in six steps. When commercially available l-prolinol was used as a chiral building block, (S)-(+)-tylophorine was also synthesized in 49% yield and >99% ee over five linear steps.

IndolesMagnetic Resonance SpectroscopyPyrrolidinesFree RadicalsChemistry OrganicStereoisomerism010402 general chemistry01 natural sciencesRadical cyclizationStructure-Activity RelationshipAlkaloidsOrganic chemistry010405 organic chemistryChemistryOrganic ChemistryIndolizinesTemperatureTotal synthesisStereoisomerismNuclear magnetic resonance spectroscopyPhenanthrenesIsoquinolines0104 chemical sciencesCyclizationYield (chemistry)PhenanthrolinesThe Journal of Organic Chemistry
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Porphyrin and phthalocyanine photosensitizers designed for targeted photodynamic therapy of colorectal cancer

2020

Colorectal cancer is of particular concern due to its high mortality rate count. Recent investigations on targeted phototherapy involving novel photosensitizers and drug-delivery systems have provided promising results and realistic prospects for a successful medical treatment. New research trends have been focused particularly on development of advanced molecular systems offering effective photoactive species which could be selectively delivered directly into the affected cells. Porphyrins and phthalocyanines have been considered extremely attractive for this purpose due to their molecular versatility, excellent photochemical properties and multifunctional nature. In this review it has bee…

IndolesPorphyrinsCell SurvivalColorectal cancerPhthalocyaninesmedicine.medical_treatmentClinical BiochemistryPharmaceutical ScienceAntineoplastic AgentsPhotodynamic therapyIsoindolesMolecular systems01 natural sciencesBiochemistryPhotodynamic therapyTargeted therapyTargeted therapyMiceStructure-Activity Relationshipchemistry.chemical_compoundCoordination ComplexesCell Line TumorDrug DiscoverymedicineAnimalsHumansMolecular BiologyCell ProliferationPhotosensitizing AgentsDose-Response Relationship DrugMolecular StructureMedical treatment010405 organic chemistryOrganic ChemistryNeoplasms Experimentalmedicine.diseaseColorectal cancerPorphyrin0104 chemical sciencesPhthalocyanine derivatives010404 medicinal & biomolecular chemistryPhotochemotherapychemistryPhthalocyanineCancer researchMolecular MedicineDrug Screening Assays AntitumorColorectal NeoplasmsBioorganic & Medicinal Chemistry
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Hydantoin-substituted 4,6-dichloroindole-2-carboxylic acids as ligands with high affinity for the glycine binding site of the NMDA receptor.

2002

A novel series of C-3 substituted 4,6-dichloroindole-2-carboxylic acids was synthesized to investigate the influence of different hydrogen-bond donor and acceptor groups at this specific position on the affinity to the glycine site of the NMDA receptor. These novel 3-indolylmethyl derivatives with ring-open (amines, sulfonamides, amides, ureas) and cyclic substituents (imidazolidin-2-ones, (thio)hydantoins) led to the discovery that compounds bearing a hydantoin substituent at the C-3 position of the indole nucleus are the most promising ones. In this series the hydantoins, ureas, and imidazolidin-2-ones were identified as very potent inhibitors of the binding of the glycine site specific l…

IndolesStereochemistrySwineGlycineHydantoinThio-In Vitro TechniquesLigandsBinding CompetitiveReceptors N-Methyl-D-Aspartatechemistry.chemical_compoundMiceRadioligand AssayStructure-Activity RelationshipGlycine bindingSeizuresDrug DiscoveryAnimalsBinding siteGlycine receptorIndole testElectroshockBinding SitesBicyclic moleculeHydantoinsBrainRatschemistryGlycineMolecular MedicineAnticonvulsantsFemaleJournal of medicinal chemistry
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A New Oxadiazole-Based Topsentin Derivative Modulates Cyclin-Dependent Kinase 1 Expression and Exerts Cytotoxic Effects on Pancreatic Cancer Cells

2021

Pancreatic ductal adenocarcinoma (PDAC) is a highly lethal form of cancer characterized by drug resistance, urging new therapeutic strategies. In recent years, protein kinases have emerged as promising pharmacological targets for the treatment of several solid and hematological tumors. Interestingly, cyclin-dependent kinase 1 (CDK1) is overexpressed in PDAC tissues and has been correlated to the aggressive nature of these tumors because of its key role in cell cycle progression and resistance to the induction of apoptosis. For these reasons, CDK1 is one of the main causes of chemoresistance, representing a promising pharmacological target. In this study, we report the synthesis of new 1,2,4…

Indolespancreatic cancerPharmaceutical ScienceAntineoplastic AgentsApoptosisArticleAnalytical ChemistryStructure-Activity RelationshipQD241-441CDK1 inhibitorantiproliferativeCatalytic DomainCell Line TumorDrug DiscoveryCDC2 Protein KinaseHumansPhysical and Theoretical ChemistryProtein Kinase InhibitorsCell ProliferationOxadiazolesOrganic ChemistryImidazoles124-oxadiazolePDACmarine alkaloidMolecular Docking SimulationPancreatic NeoplasmsChemistry (miscellaneous)Molecular Medicinemarine alkaloidstopsentinDrug Screening Assays Antitumor124-oxadiazole; marine alkaloids; topsentin; CDK1 inhibitor; pancreatic cancer; PDAC; antiproliferative; apoptosisCarcinoma Pancreatic DuctalProtein BindingSignal TransductionMolecules
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Development of novel dipeptide-like rhodesain inhibitors containing the 3-bromoisoxazoline warhead in a constrained conformation.

2015

Novel dipeptide-like rhodesain inhibitors containing the 3-bromoisoxazoline warhead in a constrained conformation were developed; some of them possess K(i) values in the micromolar range. We studied the structure-activity relationship of these derivatives and we performed docking studies, which allowed us to find out the key interactions established by the inhibitors with the target enzyme. Biological results indicate that the nature of the P2 and P3 substituents and their binding to the S2/S3 pockets is strictly interdependent.

InhibitorMolecular modelCell SurvivalClinical BiochemistryTrypanosoma brucei bruceiAntiprotozoal AgentsPharmaceutical ScienceMolecular modelingCysteine Proteinase InhibitorsBiochemistryCell Linechemistry.chemical_compoundMiceStructure-Activity RelationshipCysteine ProteasesDrug DiscoveryAnimalsMolecular Biology3-Bromo isoxazolinechemistry.chemical_classificationDipeptide-likeDipeptideBinding SitesOrganic ChemistryDipeptidesIsoxazolesCombinatorial chemistryProtein Structure TertiaryMolecular Docking SimulationCysteine EndopeptidasesEnzymeRhodesainchemistryWarheadDocking (molecular)Drug DesignMolecular MedicineRhodesain Dipeptide-like 3-Bromo isoxazoline Inhibitor Molecular modelingBioorganicmedicinal chemistry
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Influence of cyclization and acyl substitution on the inotropic effects of adenine nucleotides.

1973

This study was designed to further elucidate relevance and mechanism of the positive inotropic action of cyclic N6-2′-O-dibutyryl-AMP (DB-c-AMP). For this purpose the effects of cyclic N6-monobutyryl-AMP (N6-MB-c-AMP), noncyclic N6-2′-O-3′-O-tributyryl-5′-AMP (TB-AMP), c-AMP, adenosine and various adenine nucleotides (ATP, ADP, AMP) on myocardial contractile force (CF) were investigated and compared to that of DB-c-AMP. The experiments were performed on isolated, electrically driven (frequency 2 Hz) rat left auricles, i.e. on a preparation in which DB-c-AMP consistently produced positive inotropic effects. The following results were obtained: From the failure of non-cyclic TB-AMP to increas…

InotropeAdenosineTime FactorsStereochemistryAcylationPharmacology toxicologyStructure-Activity RelationshipAdenosine TriphosphateAdenine nucleotidemedicineCyclic AMPAnimalsPharmacologyChemistryAdenine NucleotidesNucleophilic acyl substitutionHeartGeneral MedicineAdenosineAdenosine MonophosphateRatsAdenosine DiphosphateButyratesCyclizationTime courseFemaleIntracellularmedicine.drugNaunyn-Schmiedeberg's archives of pharmacology
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Tracking Ca

2019

We characterize thus-far elusive domain rearrangements of a calcium-transporting ATPase in the native membrane.

Ion TransportProtein ConformationBiophysicsQuantitative Structure-Activity RelationshipSciAdv r-articlesMolecular Dynamics SimulationCrystallography X-RaySarcoplasmic Reticulum Calcium-Transporting ATPasesKineticsStructural BiologyCalciumProtein Interaction Domains and MotifsResearch ArticlesProtein BindingResearch ArticleScience advances
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Effect of ionization and the nature of the mobile phase in quantitative structure-retention relationship studies.

2005

Abstract The octanol–water distribution constant, commonly called partition coefficient, Po/w, is a parameter often retained as a measure of the hydrophobicity of a molecule. log Po/w, for a given molecule, can be conveniently evaluated constructing correlation lines between standard retention factor logarithms (log k) in reversed-phase liquid chromatography (RPLC) and standard log Po/w values. Many compounds of pharmaceutical interest can be quite hydrophobic and have, simultaneously, basic nitrogen atoms or acidic sulfur containing groups in their structure. This renders them ionizable. The hydrophobicity of the molecular drug form (Po/w value) is completely different from its ionic form …

IonsChromatographyChemistryElutionOrganic ChemistryDistribution constantAnalytical chemistryGeneral MedicineReversed-phase chromatographyBiochemistryHigh-performance liquid chromatographyAnalytical ChemistryHydrophobic effectPartition coefficientStructure-Activity RelationshipMicellar liquid chromatographyLipophilicityChromatography LiquidJournal of chromatography. A
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