Search results for "supramolecular"

showing 10 items of 830 documents

A supramolecular system that strictly follows the binding mechanism of conformational selection

2020

Induced fit and conformational selection are two dominant binding mechanisms in biology. Although induced fit has been widely accepted by supramolecular chemists, conformational selection is rarely studied with synthetic systems. In the present research, we report a macrocyclic host whose binding mechanism is unambiguously assigned to conformational selection. The kinetic and thermodynamic aspects of this system are studied in great detail. It reveals that the kinetic equation commonly used for conformational selection is strictly followed here. In addition, two mathematical models are developed to determine the association constants of the same guest to the two host conformations. A “confo…

Models Molecularconformational selectionProtein ConformationScienceSupramolecular chemistrybiological systemsGeneral Physics and Astronomy010402 general chemistryLigands01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyBiophysical PhenomenaArticlesupramolecular chemistryMolecular recognitionProtein structureProtein DomainsComputational chemistryHeterocyclic Compoundsmechanisms in biologysupramolekulaarinen kemialcsh:ScienceSelection (genetic algorithm)Multidisciplinary010405 organic chemistryMechanism (biology)QProteinsGeneral ChemistryModels Theoretical0104 chemical sciencesKineticsPhysical chemistryKinetic equationsProteins metabolismsynthetic systemsThermodynamicslcsh:Qmolecular recognitionSupramolecular chemistryProtein Binding
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Copper Uptake Induces Self-Assembly of 18.5 kDa Myelin Basic Protein (MBP)

2010

Myelin basic protein (MBP) is predominantly found in the membranes of the myelin sheath of the central nervous system and is involved in important protein-protein and protein-lipid interactions in vivo and in vitro. Furthermore, divalent transition metal ions, especially Zn(2+) and Cu(2+), seem to directly affect the MBP-mediated formation and stabilization of the myelin sheath of the central nervous system. MBP belongs to the realm of intrinsically disordered proteins, and only fragmentary information is available regarding its partial structure(s) or supramolecular arrangements. Here, using standard continuous wave and modern pulse electron paramagnetic resonance methods, as well as dynam…

Models Molecularinorganic chemicalsLightBiophysicsSupramolecular chemistryIn Vitro TechniquesIntrinsically disordered proteinsBiophysical PhenomenaDivalentlaw.inventionlawAnimalsScattering RadiationMoleculeParticle SizeElectron paramagnetic resonanceIon transporterchemistry.chemical_classificationIon TransportbiologyProteinElectron Spin Resonance SpectroscopyMyelin Basic ProteinMyelin basic proteinSolutionsZincMembranechemistryBiochemistrybiology.proteinBiophysicsCattleProtein MultimerizationCopperBiophysical Journal
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Micelles, Rods, Liposomes, and Other Supramolecular Surfactant Aggregates: Computational Approaches

2017

Surfactants are an interesting class of compounds characterized by the segregation of polar and apolar domains in the same molecule. This peculiarity makes possible a whole series of microscopic and macroscopic effects. Among their features, their ability to segregate particles (fluids or entire domains) and to reduce the surface/interfacial tension is the utmost important. The interest in the chemistry of surfactants never weakened; instead, waves of increasing interest have occurred every time a new field of application of these molecules has been discovered. All these special characteristics depend largely on the ability of surfactants to self-assemble and constitute supramolecular struc…

Molecular dynamicSupramolecular chemistryIonic bondingNanotechnologyHealth Informatics010402 general chemistry01 natural sciencesMicelleGeneral Biochemistry Genetics and Molecular BiologySurface tensionSurface-Active AgentsMolecular dynamicsPulmonary surfactantSurfactantSide chainMoleculeComputer SimulationRodMicellesBiochemistry Genetics and Molecular Biology (all)Mass spectrometryChemistry010401 analytical chemistryWaterComputer Science Applications1707 Computer Vision and Pattern Recognition0104 chemical sciencesComputer Science ApplicationsLiposomeChemical physicsLiposomesGasesMicelle
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Pillar[n]arenes-a Novel, Highly Promising Class of Macrocyclic Host Molecules

2014

Since 2008 a new field of supramolecular chemistry has developed rapidly: the chemistry of pillar[n]arenes. These “younger brothers and sisters” of calixarenes are conveniently accessible and extremely guest-friendly. Guests from many different classes of organic compounds are welcome. Nevertheless, a high selectivity for the threading of guest molecules in the macrocyclic cavities can be achieved. The complex stability is characterized by association constants Ka between 10 and 1×108 M−1. The rate constants of the threading vary over several orders of magnitude. The focus of this article lies on the preparation (sections 2 and 3) and the structures (section 4) of pillar[n]arenes (n=5–10) i…

Molecular dynamicsReaction rate constantStereochemistryChemistryOrganic ChemistryCalixarenePillarSupramolecular chemistryMoleculeThreading (protein sequence)SelectivityCombinatorial chemistryAsian Journal of Organic Chemistry
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The Role of Side-Arms for Supramolecular Affinity Materials Based on 9,9′-Spirobifluorenes

2017

An eightfold functionalized D2d-symmetric 9,9' spirobifluorene was condensed with a collection of diketones with elaborated structural features to form three-dimensional supramolecular architectures with active surfaces. Gas sorption measurements by quartz crystal microbalances revealed remarkable indications about the molecular interactions for the application as affinity materials for the detection of volatile organic compounds. Single-crystal X-ray structure analysis further gave insight by packing motifs and for potential host-guest interactions.

Molecular interactionsStructure analysis010405 organic chemistryChemistryOrganic ChemistrySupramolecular chemistrySorption010402 general chemistry01 natural sciences0104 chemical sciencesCrystalMolecular recognitionComputational chemistryOrganic chemistryPhysical and Theoretical ChemistryQuartzEuropean Journal of Organic Chemistry
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Spin Crossover in a Supramolecular Fe4II [2×2] Grid Triggered by Temperature, Pressure, and Light

2000

A multiplex electronic switch on the molecular level has been realized by using a tetranuclear FeII complex of the [2×2] grid type. The four metal ions can be switched stepwise between their high-spin and low-spin states by temperature, pressure, and light, thus representing a triple level, triple switch system as illustrated in the picture.

Molecular levelChemistryChemical physicsSpin crossoverMetal ions in aqueous solutionMössbauer spectroscopySupramolecular chemistryNanotechnologyGeneral ChemistryGridCatalysisElectronic switchAngewandte Chemie International Edition
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Use of Bile Acids in Pharmacological and Supramolecular Applications

2004

Bile acid-based structures have become increasingly important in different fields of chemistry over recent years, having found applications in pharmacology, supramolecular chemistry and nanoscience. Some interesting studies concerning these applications are reviewed, together with the latest developments in synthetic and analytical methods for bile acid-derived frameworks. (© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2004)

Molecular recognitionBiochemistryBile acidmedicine.drug_classChemistryOrganic ChemistrySupramolecular chemistrymedicineNanotechnologyGeneral MedicinePhysical and Theoretical ChemistryCombinatorial chemistryChemInform
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Self-assembly of amphiphilic calixarenes and resorcinarenes in water

2010

The calixarenes and resorcinarenes are macrocyclic phenolic molecules that can be modified “a facon” and a wide range of chemical modification strategies have been published over the last 30 years. Because of their remarkable structural properties and their relative ease of chemical modification, they represent excellent and highly versatile bases to design complex building blocks capable of self-assembly and molecular recognition. They have been widely studied for their ability to form supramolecular structures targeting a wide range of applications. The possibility to regio(rim)-selectively modify these macrocycles with different polar and apolar moieties provides synthetic chemists with …

Molecular recognitionChemistryAmphiphileCalixareneMaterials ChemistrySupramolecular chemistryChemical modificationMoleculeNanotechnologyGeneral ChemistrySelf-assemblyCatalysisNew Journal of Chemistry
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ChemInform Abstract: Self-Assembly of Amphiphilic Calixarenes and Resorcinarenes in Water

2011

The calixarenes and resorcinarenes are macrocyclic phenolic molecules that can be modified “a facon” and a wide range of chemical modification strategies have been published over the last 30 years. Because of their remarkable structural properties and their relative ease of chemical modification, they represent excellent and highly versatile bases to design complex building blocks capable of self-assembly and molecular recognition. They have been widely studied for their ability to form supramolecular structures targeting a wide range of applications. The possibility to regio(rim)-selectively modify these macrocycles with different polar and apolar moieties provides synthetic chemists with …

Molecular recognitionChemistryAmphiphileCalixareneSupramolecular chemistryChemical modificationMoleculeNanotechnologyGeneral MedicineSelf-assemblyChemInform
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ChemInform Abstract: Dimeric Resorcin[4]arene Capsules in the Solid State

2012

Supramolecular chemistry research is focused on the study of weak non-covalent intermolecular — that is, supramolecular — interactions as the driving force in self-assembly and molecular recognition. Dimeric resorcin[4]arenes capsules have been a focus of our research for the last 15 years. This review describes the solid state complexation studies of unsubstituted phenolic resorcin[4]arenes and pyrogall[4]arenes towards the formation of dimeric capsules and assemblies using ionic and neutral species as guest molecules and templates. The multitude of different crystal structures obtained during these studies demonstrates the versatile nature of resorcin[4]arenes and pyrogall[4]arenes (2-hyd…

Molecular recognitionChemistryPolymer chemistryIntermolecular forceSolid-stateSupramolecular chemistryMoleculeIonic bondingGeneral MedicineCrystal structureCrystal engineeringChemInform
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