Search results for "synonym"

showing 10 items of 101 documents

Datos para la Historia de la Malacología Española: Las ediciones del <em>Catálogo</em> de Graells

1994

Graells's contribution to the history of Malacology, his Catalogo de los Moluscos terrestes y de agua dulce observados en Espana y descripcion y notas de algunas especies nuevas o poco conocidas del mismo pais, is the first synthesis by a Spanish author on the subject dealing with the whole of continental Spain and the Balearic Islands. He described several new species, some of which have been included in the synonym of species known previously. The name of some of the species discussed has been abandoned, while for other cases his description remains valid.

Balearic islandsHistory and Philosophy of ScienceSynonym (taxonomy)PhilosophygovernmentEthnologygovernment.political_districtMalacologyAsclepio
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Review of the Hartig type collection of Alloxysta (Hymenoptera: Figitidae:Charipinae) and other Alloxysta material deposited in the Zoologische Staat…

2014

Hartig's collection of Alloxysta species, deposited in the Zoologische Staatssammlung Museum (ZSM, Munich, Germany), is here reviewed. In total, 19 species and 144 specimens have been studied. Fourteen species, of the previous twenty-two, are now valid: Alloxysta aperta (Hartig, 1841), A. brachyptera (Hartig, 1840), A. castanea (Hartig, 1841), A. circumscripta (Hartig, 1841), A. fuscicornis (Hartig, 1841), A. leunisii (Hartig, 1841), A. longipennis (Hartig, 1841), A. macrophadna (Hartig, 1841), A. melanogaster (Hartig, 1840), A. obscurata (Hartig, 1840), A. pilipennis (Hartig, 1840), A. postica (Hartig, 1841), A. minuta (Hartig, 1840) and A. rufiventris (Hartig, 1840). These species are red…

CharipinaebiologySynonymBrachypteraBotanyAlloxysta cursorHimenòptersFigitidaeTaxonomy (biology)Hymenopterabiology.organism_classificationHymenopteraNomen dubiumFragmenta Faunistica
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Taxonomic investigation using DNA fingerprinting in Geitlerinema species (Oscillatoriales, Cyanobacteria)

2007

SUMMARY The taxonomic study of 14 strains of Geitlerinema amphibium (Ag. ex Gom.) Anagnostidis and Geitlerinema unigranulatum (R.N. Singh) Komarek and Azevedo, coming from several localities was undertaken. Use was made of morphological data and molecular data were obtained by means of the DNA fingerprinting technique using highly iterated palindrome (HIP1) sequences. The employed morphological characteristics were those used for species taxonomic identification belonging to the Geitlerinema genus, namely, cell dimensions, shape of the apical cell, motility, number and localization of cyanophycin granules in the cell. The two species revealed as polymorphic were discriminated only by means …

CyanobacteriaGenetic diversitybiologySynonymStrain (biology)Plant ScienceAquatic Sciencebiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)TaxonDNA profilingEvolutionary biologyGenusBotanyOscillatorialesPhycological Research
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Roseivivax atlanticus (Li, Lai, Liu, Sun and Shao, 2015) is a later heterotypic synonym of Roseivivax marinus (Dai, Shi, Gao, Liu and Zhang, 2014)

2018

The genomes of the type strains of Roseivivax atlanticus and Roseivivax marinus ( Rhodobacteraceae , Alphaproteobacteria ), were analysed to determine their respective Average Nucleotide Identity (ANI) and in silico DNA–DNA hybridization (DDH) values. These species were proposed and effectively published relatively closely in time (February and August 2014, respectively) and so not taking account of the other. The intergenomic relatedness between both type strains, 97.0–97.4 % ANI and 82.8 % in silico DDH, confirm that they represent members of the same genomic species. This conclusion is also supported at the phenotypic level. Since the name Roseovarius marinus was validly published earlie…

DNA Bacterial0301 basic medicineGeneticsbiologyZhàngNucleic Acid HybridizationRoseovarius marinusSequence Analysis DNAGeneral Medicinebiology.organism_classificationMicrobiologyBacterial Typing Techniques03 medical and health sciences030104 developmental biologySynonym (taxonomy)Roseivivax atlanticusRhodobacteraceaeRhodobacteraceaePhylogenyEcology Evolution Behavior and SystematicsRoseivivax marinusInternational Journal of Systematic and Evolutionary Microbiology
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Sequence diversity in the pe_pgrs genes of Mycobacterium tuberculosis is independent of human T cell recognition.

2014

ABSTRACT The Mycobacterium tuberculosis genome includes the large family of pe_pgrs genes, whose functions are unknown. Because of precedents in other pathogens in which gene families showing high sequence variation are involved in antigenic variation, a similar role has been proposed for the pe_pgrs genes. However, the impact of immune selection on pe_pgrs genes has not been examined. Here, we sequenced 27 pe_pgrs genes in 94 clinical strains from five phylogenetic lineages of the M. tuberculosis complex (MTBC). We found that pe_pgrs genes were overall more diverse than the remainder of the MTBC genome, but individual members of the family varied widely in their nucleotide diversity and in…

DNA BacterialNonsynonymous substitutionGenotypeSequence analysisT-Lymphocytes1.1 Normal biological development and functioningMolecular Sequence DataEpitopes T-LymphocyteBiologyGenomeMicrobiologyEpitopeMycobacterium tuberculosisEpitopesRare DiseasesBacterial ProteinsINDEL MutationGeneticUnderpinning researchVirologyAntigenic variationGeneticsGene familyHumansTuberculosis2.1 Biological and endogenous factorsSelection GeneticAntigensAetiologyGeneSelectionGeneticsAntigens BacterialHuman GenomeBacterialMembrane ProteinsComputational BiologyGenetic VariationSequence Analysis DNAMycobacterium tuberculosisDNAbiology.organism_classificationQR1-5023. Good healthInfectious DiseasesGood Health and Well BeingT-LymphocyteSequence AnalysisResearch ArticlemBio
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Diversity of leaf katydids (Orthoptera: Tettigoniidae: Phaneropterinae) of Dzanga-Ndoki National Park, Central African Republic, with selected record…

2013

Forty-four species of Phaneropterinae are recorded from Dzanga-Ndoki National Park in the Central African Republic. Eight species collected within the park are described as new to science: Phlaurocentrum morettoi n. sp., P. paratuberosum n. sp., P. elegans n. sp., Myllocentrum raggei n. sp., Poreuomena sanghensis n. sp., Cestromoecha longicerca n. sp., C. magnicerca n. sp., and Goetia purpurea n. sp. An additional new species from Guinea is described from specimens preserved in the Museo Nacional de Ciencias Naturales of Madrid, Poreuomena huxleyi n. sp. Eurycorypha stylata Stål, 1873 is recorded for the first time from Burkina Faso and Brycoptera lobata Ragge, 1981 from Ivory Coast. The fo…

EurycoryphabiologyOrthopteraNational parkEcologyTettigoniidaeZoologybiology.organism_classificationSettore AGR/11 - Entomologia Generale E ApplicataLobataInsect Sciencenew species new records synonymies taxonomy distributionTaxonomy (biology)Phaneropterinae
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Accelerated Evolution of Fetuin-A (FETUA, also AHSG) is Driven by Positive Darwinian Selection, not GC-Biased Gene Conversion

2009

article i nfo Human Fetuin-A (FETUA, also termed AHSG) is a serum protein composed of two cystatin-like domains D1 and D2 of together 235 amino acids (aa) and an unrelated domain D3 of 114 aa. Though the protein plays a role in diverse physiological and pathological processes, comparably little is known about sequence evolution of FETUA. We therefore analyzed its molecular evolution on the basis of coding sequences of 16 primate species. Ratios of non-synonymous to synonymous substitution rates (dn/ds= ω) suggest that a previously reported acceleration of sequence evolution of exon 7, which encodes domain D3, is driven by positive selection instead of neutral evolution. Irrespective of the …

GeneticsBase Sequencealpha-2-HS-GlycoproteinNull modelGene ConversionLocus (genetics)Blood ProteinsGeneral MedicineBiologyCleavage (embryo)Protein Structure TertiaryEvolution MolecularExonMolecular evolutionGeneticsAnimalsHumansGene conversionSelection GeneticCodonSynonymous substitutionNeutral theory of molecular evolutionGene
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Molecular basis of adaptive convergence in experimental populations of RNA viruses

2002

Abstract Characterizing the molecular basis of adaptation is one of the most important goals in modern evolutionary genetics. Here, we report a full-genome sequence analysis of 21 independent populations of vesicular stomatitis ribovirus evolved on the same cell type but under different demographic regimes. Each demographic regime differed in the effective viral population size. Evolutionary convergences are widespread both at synonymous and nonsynonymous replacements as well as in an intergenic region. We also found evidence for epistasis among sites of the same and different loci. We explain convergences as the consequence of four factors: (1) environmental homogeneity that supposes an id…

GeneticsNonsynonymous substitutionLikelihood Functionseducation.field_of_studyClonal interferenceHuman evolutionary geneticsPopulation sizePoint mutationPopulationEpistasis GeneticBiologyEvolution MolecularPhylogeneticsEvolutionary biologyGeneticsPoint MutationRNA VirusesEpistasiseducationPhylogenyResearch Article
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Molecular Evolution of the Globin Gene Cluster E in Two Distantly Related Midges, Chironomus pallidivittatus and C. thummi thummi

1998

We have studied the evolutionary dynamics of a cluster of insect globin genes by comparing the organization and sequence of the gene group in two distantly related species, Chironomus pallidivittatus and C. t. thummi. Although the general architecture of the globin gene cluster has been conserved, we have found an additional, previously undescribed gene (named Cpa F) in C. pallidivittatus which shows signs of accelerated sequence evolution at nonsynonymous codon positions. This new gene is clearly functional, as demonstrated by Northern analysis. Comparison of paralogous and orthologous genes reveals patterns of intraspecific sequence homogenization. The head-to-head-oriented globin 3 and 4…

GeneticsNonsynonymous substitutionMolecular Sequence DataStructural geneNucleic acid sequenceGenes InsectBiologyChironomidaeGlobinsEvolution MolecularMolecular evolutionMultigene FamilyGeneticsAnimalsCoding regionAmino Acid SequenceGene conversionGlobinMolecular BiologyGeneEcology Evolution Behavior and SystematicsJournal of Molecular Evolution
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Hsp90 dictates viral sequence space by balancing the evolutionary tradeoffs between protein stability, aggregation and translation rate

2017

AbstractAcquisition of mutations is central to evolution but the detrimental effects of most mutations on protein folding and stability limit protein evolvability. Molecular chaperones, which suppress aggregation and facilitate polypeptide folding, are proposed to promote sequence diversification by buffering destabilizing mutations. However, whether and how chaperones directly control protein evolution remains poorly understood. Here, we examine the effect of reducing the activity of the key eukaryotic chaperone Hsp90 on poliovirus evolution. Contrary to predictions of a buffering model, inhibiting Hsp90 increases population sequence diversity and promotes accumulation of mutations reducin…

Geneticseducation.field_of_studybiologyPopulationComputational biologyProtein aggregationHsp90EvolvabilityChaperone (protein)biology.proteinProtein foldingSynonymous substitutioneducationBiogenesis
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