Search results for "ta1181"

showing 10 items of 526 documents

Variation in gene expression within clones of the earthworm Dendrobaena octaedra

2017

Gene expression is highly plastic, which can help organisms to both acclimate and adapt to changing environments. Possible variation in gene expression among individuals with the same genotype (among clones) is not widely considered, even though it could impact the results of studies that focus on gene expression phenotypes, for example studies using clonal lines. We examined the extent of within and between clone variation in gene expression in the earthworm Dendrobaena octaedra, which reproduces through apomictic parthenogenesis. Five microsatellite markers were developed and used to confirm that offspring are genetic clones of their parent. After that, expression of 12 genes was measured…

0106 biological sciences0301 basic medicinegenotypeClone (cell biology)lcsh:Medicineearthworms01 natural sciencesMicrosatellite LociDendrobaena octaedraGenotypeGene expressiongeeniekspressioAnnelidslcsh:ScienceGeneticsMultidisciplinarykloonitPhenotypePhenotypesMicrosatelliteGene CloningResearch ArticleGenotypingBiologyResearch and Analysis Methods010603 evolutionary biologygenotyyppi03 medical and health sciencesExtraction techniquesclonesGene TypesApomixisGeneticsAnimalsOligochaetaparthenogenesisMolecular Biology TechniquesMolecular BiologyGenepartenogeneesita1184lcsh:ROrganismsBiology and Life SciencesParthenogenesisInvertebratesRNA extraction030104 developmental biologygene expressionta1181lcsh:QMicrosatellite RepeatsCloningPLoS ONE
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Variation in the COI gene of the freshwater pearl mussel Margaritifera margaritifera from River Vuokkijoki

2017

The freshwater pearl mussel Margaritifera margaritifera L. is one of the most endangered freshwater mussels in the world. Effective conservation of threatened species requires not only ecological, but also genetic information from the target species and populations. Since low genetic diversity can reduce the ability of a species to adapt to environmental changes, maintaining genetic diversity has been identified as one of the key elements in successful conservation programs. We examined genetic variation of the freshwater pearl mussel from the River Vuokkijoki, Karelia, Russia. We sequenced a fragment of the cytochrome c oxidase subunit I gene (COI) from 22 individuals and compared the data…

0106 biological sciences0301 basic medicinehaplotypescytochrome c oxidase subunit I gene (COI)PopulationEndangered species010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesfreshwater pearl musselGenetic variationeducationMargaritiferaVuokkijokieducation.field_of_studyGenetic diversitybiologyEcologyCytochrome c oxidase subunit Ifungigenetic diversitybiology.organism_classification030104 developmental biologyMargaritifera margaritiferaFreshwater pearl musselThreatened speciesta1181General Agricultural and Biological Sciences
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Epigenetic and Genetic Contributions to Adaptation in Chlamydomonas

2017

Epigenetic modifications, such as DNA methylation or histone modifications, can be transmitted between cellular or organismal generations. However, there are no experiments measuring their role in adaptation, so here we use experimental evolution to investigate how epigenetic variation can contribute to adaptation. We manipulated DNA methylation and histone acetylation in the unicellular green alga Chlamydomonas reinhardtii both genetically and chemically to change the amount of epigenetic variation generated or transmitted in adapting populations in three different environments (salt stress, phosphate starvation, and high CO2) for two hundred asexual generations. We find that reducing the …

0106 biological sciences0301 basic medicinehiilidioksidiEpigenomicsAdaptation Biological01 natural sciencestolerance (physical)Epigenesis GeneticEpigenomicssietokyky2. Zero hungerGeneticsExperimental evolutionepigeneettinen periytyminenSalt Tolerancegreen algaeAdaptation PhysiologicalHistoneDNA methylationepigenetic inheritancephosphate starvationBiologyEnvironment010603 evolutionary biologysuolapitoisuus03 medical and health sciencesviherlevätGenetic variationGeneticsEpigeneticssalt contentexperimental evolutionravinnepitoisuusMolecular BiologyGeneEcology Evolution Behavior and Systematicssalt tolerancefosfaatitta1183ChlamydomonasGenetic Variationadaptive walkcarbon dioxideDNA Methylation030104 developmental biologyepigenetic mutationMutationbiology.proteinta1181methylationAdaptationDirected Molecular EvolutionChlamydomonas reinhardtii
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Intensive Management and Natural Genetic Variation in Red Deer (Cervus elaphus)

2017

The current magnitude of big-game hunting has outpaced the natural growth of populations, making artificial breeding necessary to rapidly boost hunted populations. In this study, we evaluated if the rapid increase of red deer (Cervus elaphus) abundance, caused by the growing popularity of big-game hunting, has impacted the natural genetic diversity of the species. We compared several genetic diversity metrics between 37 fenced populations subject to intensive management and 21 wild free-ranging populations. We also included a historically protected population from a national park as a baseline for comparisons. Contrary to expectations, our results showed no significant differences in geneti…

0106 biological sciences0301 basic medicinehuntingPopulationBreedingBiology010603 evolutionary biology01 natural sciencesmicrosatellites03 medical and health sciencesBig-gameAbundance (ecology)Genetic variationGeneticsAnimalsGenetic variabilityAnimal HusbandryeducationMolecular BiologyGenetics (clinical)translocationseducation.field_of_studyGenetic diversityHabitat fragmentationEcologyNational parkDeerhunting statesbig-gameGenetic Variation030104 developmental biologyta1181Microsatellitehabitat fragmentationhuman activitiesBiotechnologyJournal of Heredity
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Species’ ecological functionality alters the outcome of fish stocking success predicted by a food-web model

2018

Fish stocking is used worldwide in conservation and management, but its effects on food-web dynamics and ecosystem stability are poorly known. To better understand these effects and predict the outcomes of stocking, we used an empirically validated network model of a well-studied lake ecosystem. We simulate two stocking scenarios with two native fish species valuable for fishing. In the first scenario, we stock planktivorous fish (whitefish) larvae in the ecosystem. This leads to a 1% increase in adult whitefish biomasses and decreases the biomasses of the top predator (perch). In the second scenario, we also stock perch larvae in the ecosystem. This decreases the planktivorous whitefish an…

0106 biological sciences0301 basic medicinekalanistutus010603 evolutionary biology01 natural sciencesekosysteemit03 medical and health sciencesStockingfish stockingFish stockingEcosystem14. Life underwaterlcsh:ScienceApex predatorEcological stabilityPerchMultidisciplinaryecosystem stabilitybiologyEcologykalakannatfeeding interactionsLake ecosystemvesiekosysteemitbiology.organism_classificationfood-web dynamicsFood webekosysteemit (ekologia)030104 developmental biologyallometric trophic network modelta1181lcsh:QravintoverkotRoyal Society Open Science
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Is it interspecific information use or aggression between putative competitors that steers the selection of nest-site characteristics? A reply to Sla…

2018

0106 biological sciences0301 basic medicinelearningAggressionanimal behaviourZoologyInterspecific competitionCompetitor analysisinformation useBiology010603 evolutionary biology01 natural sciences03 medical and health sciences030104 developmental biologymedicineta1181Animal Science and ZoologyNest sitemedicine.symptomecologycompetitionEcology Evolution Behavior and SystematicsSelection (genetic algorithm)Journal of Avian Biology
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Broad thermal tolerance is negatively correlated with virulence in an opportunistic bacterial pathogen

2018

Predicting the effects of global increase in temperatures on disease virulence is challenging, especially for environmental opportunistic bacteria, because pathogen fitness may be differentially affected by temperature within and outside host environment. So far, there is very little empirical evidence on the connections between optimal temperature range and virulence in environmentally growing pathogens. Here, we explored whether the virulence of an environmentally growing opportunistic fish pathogen, Flavobacterium columnare, is malleable to evolutionary changes via correlated selection on thermal tolerance. To this end, we experimentally quantified the thermal performance curves (TPCs) f…

0106 biological sciences0301 basic medicinelämmönsietoGrowing seasonVirulenceZoology010603 evolutionary biology01 natural sciencesthermal tolerancethermal performance curvesbakteerit03 medical and health sciencesOpportunistic pathogenGeneticsPathogenEcology Evolution Behavior and Systematics2. Zero hungerGenetic diversitybiologyHost (biology)opportunistic pathogenta1182virulenssiOriginal Articlesilmastonmuutoksetbiology.organism_classificationvirulenceclimate changetaudinaiheuttajat030104 developmental biology13. Climate actionFlavobacterium columnareta1181Original ArticleGeneral Agricultural and Biological SciencesBacteriaEvolutionary Applications
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Positive density-dependent growth supports costs sharing hypothesis and population density sensing in a manipulative parasite.

2017

SUMMARYParasites manipulate their hosts’ phenotype to increase their own fitness. Like any evolutionary adaptation, parasitic manipulations should be costly. Though it is difficult to measure costs of the manipulation directly, they can be evaluated using an indirect approach. For instance, theory suggests that as the parasite infrapopulation grows, the investment of individual parasites in host manipulation decreases, because of cost sharing. Another assumption is that in environments where manipulation does not pay off for the parasite, it can decrease its investment in the manipulation to save resources. We experimentally infected rainbow trout Oncorhynchus mykiss with the immature larva…

0106 biological sciences0301 basic medicinemanipulation costsZoologypositive density-dependencepopulation density sensingparasitismiTrematode InfectionsBiology010603 evolutionary biology01 natural sciencesPopulation densityPredationHost-Parasite Interactions03 medical and health sciencesFish Diseaseskirjolohiloisethost–parasite interactionscost sharingParasite hostingAnimalsMetacercariaeEye lensPopulation DensityEcologyHost (biology)imumadotpopulaatiodynamiikkaAdaptation PhysiologicalBiological Evolutionparasitic manipulation030104 developmental biologyInfectious DiseasesPhenotypeDensity dependentLarvaOncorhynchus mykissMacroparasiteta1181Animal Science and ZoologyParasitologyRainbow troutTrematodaParasitology
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Detailed information on fruiting phenology provides new insights on wood-inhabiting fungal detection

2017

Abstract Fruiting phenology traits may have a large effect on the detection of fungal species. Detailed studies considering these biologically important traits are, however, surprisingly scarce. We conducted a rigorous fruit body monitoring of wood-inhabiting fungal occurrences over one fruiting season. Taxon-specific longevity of the fruiting was different between different morphological groups. This was mainly due to agaric fruiting being shorter than other groups. Different number and timing of surveys are needed to detect the majority of the fruiting taxa of different wood-inhabiting fungal groups.

0106 biological sciences0301 basic medicinemedia_common.quotation_subjectPlant Sciencepolypores010603 evolutionary biology01 natural sciencesphenology03 medical and health scienceslongevityascomycetesBotanyIUCN Red ListEcology Evolution Behavior and Systematicsmedia_commonfungal conservationEcologybiologyEcologyPhenologyAgaricEcological ModelingLongevityagaricsfood and beveragesbiology.organism_classificationdetectability030104 developmental biologyTaxonta1181corticioidsfruit body surveyred-listFungal Ecology
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Variation in male fertility in a polymorphic moth, Parasemia plantaginis

2016

The maintenance of multiple morphs in warning signals is enigmatic because directional selection through predator avoidance should lead to the rapid loss of such variation. Opposing natural and sexual selection is a good candidate driving the maintenance of multiple male morphs but it also includes another enigma: when warning signal efficiency differs between male morphs, why would females choose a phenotype with lower survival? We tested the hypothesis that indirect responses to selection on correlated characters through sexual selection may substantially shape the evolution of male coloration. If male phenotypes differ in their fertilization ability, female choice against the best surviv…

0106 biological sciences0301 basic medicinemedia_common.quotation_subjectspermatophoreZoologyFertilitymating success010603 evolutionary biology01 natural sciencespolymorphism03 medical and health sciencesParasemia plantaginisaposematismMatingreproductive and urinary physiologyEcology Evolution Behavior and Systematicsmedia_commonfertilitybiologyReproductive successDirectional selectionEcologybiology.organism_classificationerebid moths030104 developmental biologyMate choiceSexual selectionSpermatophoreta1181Animal Science and ZoologyAnimal Behaviour
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