Search results for "taxonomic"

showing 10 items of 148 documents

Taxonomy 2.0: computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory

2020

Species inventories are essential to the implementation of conservation policies to mitigate biodiversity loss and maintain ecosystem services and their value to the society. This is particularly topical with respect to climate change and direct anthropogenic effects on Antarctic biodiversity, with the identification of the most at-risk taxa and geographical areas becoming a priority. Identification tools are often neglected and considered helpful only for taxonomists. However, the development of new online information technologies and computer-aided identification tools provides an opportunity to promote them to a wider audience, especially considering the emerging generation of scientists…

0106 biological sciencesComputer science[SDV]Life Sciences [q-bio]BiodiversityEvolution des espècesOceanography010603 evolutionary biology01 natural sciencesEcosystem servicesDatabaseKnowledge baseBiodiversity conservationOcéanographie physique et chimique14. Life underwaterGéologieComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and SystematicsXper3Taxonomic keyEcologiebiologybusiness.industry010604 marine biology & hydrobiologyOdontasteridaeInformation technologyGeologyField guides15. Life on landbiology.organism_classificationData scienceKnowledge base13. Climate action[SDE]Environmental SciencesManagement systemComputer-aidedbusinessSoftwareAntarctic Science
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Looking for Hidden Enemies of Metabarcoding: Species Composition, Habitat and Management Can Strongly Influence DNA Extraction while Examining Grassl…

2021

Despite the raising preoccupation, the critical question of how the plant community is composed belowground still remains unresolved, particularly for the conservation priority types of vegetation. The usefulness of metabarcoding analysis of the belowground parts of the plant community is subjected to a considerable bias, that often impedes detection of all species in a sample due to insufficient DNA quality or quantity. In the presented study we have attempted to find environmental factors that determine the amount and quality of DNA extracted from total plant tissue from above- and belowground samples (1,000 and 10,000 cm2). We analyzed the influence of land use intensity, soil properties…

0106 biological sciencesDNA qualitylcsh:QR1-502Plant Roots01 natural sciencesBiochemistrylcsh:MicrobiologyGrasslandgraminoid vegetationSoilCalamagrostis epigejosзлаковая растительностьSoil pHVegetation typeBiomassDNA extractionHolcus lanatusgeography.geographical_feature_categoryEcologybiologyвидовой составBiodiversityVegetationHydrogen-Ion ConcentrationPlantsGrasslandпастбищные сообществаЦентральная Европаbelowground diversityRegression AnalysisSeasonsДНКMagnesium OxideRiskrootsDNA PlantNitrogenPoaceae010603 evolutionary biologyкорнеплодыArticleCoronillaDNA Barcoding TaxonomicMolecular BiologyEcosystemgeographyсреда обитанияCentral EuropePlant communityDNAbiology.organism_classificationAgronomyметабаркодированиеPoland010606 plant biology & botanyBiomolecules
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Macrophyte assessment in European lakes: Diverse approaches but convergent views of ‘good’ ecological status

2018

Graphical abstract

0106 biological sciencesEvolution/dk/atira/pure/thematic/inbo_th_00006/dk/atira/pure/policy/kaderrichtlijn_water_krw_General Decision SciencesZannichellia palustrisSpecies and biotopes010501 environmental sciences01 natural sciencesArticle/dk/atira/pure/thematic/inbo_th_00044Water Framework DirectiveAbundance (ecology)Restoration ecologyEcology Evolution Behavior and SystematicsComputingMethodologies_COMPUTERGRAPHICS0105 earth and related environmental sciencesB003-ecologyEcologybiologyEcologyEcological status010604 marine biology & hydrobiologyPhosphorusEcological assessmentNutrientsVegetationEutrophication15. Life on landbiology.organism_classificationBehaviour and SystematicsMacrophytemacrophytes (aquatic plants)PolicyGeographyWater Framework DirectiveIndicator species13. Climate action/dk/atira/pure/discipline/B000/B003articlesSpecies richness/dk/atira/pure/taxonomic/macrofytenAquatic macrophytesSpecies richnessEcological Indicators
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Fauna Europaea: Coleoptera 2 (excl. series Elateriformia, Scarabaeiformia, Staphyliniformia and superfamily Curculionoidea)

2015

Fauna Europaea provides a public web-service with an index of scientific names (including synonyms) of all living European land and freshwater animals, their geographical distribution at country level (up to the Urals, excluding the Caucasus region), and some additional information. The Fauna Europaea project covers about 230,000 taxonomic names, including 130,000 accepted species and 14,000 accepted subspecies, which is much more than the originally projected number of 100,000 species. This represents a huge effort by more than 400 contributing specialists throughout Europe and is a unique (standard) reference suitable for many users in science, government, industry, nature conservation an…

0106 biological sciencesFauna EuropaeaCleroideaInsectaCarbotripluridaAdephaga01 natural sciencesStaphyliniformiaBilateriaBiology (General)Biodiversity Informatics Coleoptera Fauna Europaea Taxonomic indexing.lcsh:QH301-705.5PolyphagaTenebrionoideaInvertebrataData ManagementBostrichoideaBiodiversity Informatics; Coleoptera; Fauna Europaea; Taxonomic indexing; Ecology Evolution Behavior and Systematics; EcologyPterygotabiologyEcologyEcologyCenozoicHexapodaCephalornisCurculionoideaLymexyloideaCircumscriptional namesddc:ColeopteraEuropeBoltonocostidaeDerodontoideaBiogeographyElateriformiaNeogeneCoelenterataData PaperFauna EuropaeaArthropodaEvolutionQH301-705.5Bioinformatics010607 zoologyNephrozoaChrysomeloideaProtostomia010603 evolutionary biologyCircumscriptional names of the taxon underAdephagaMyxophagaBehavior and SystematicsSystematicsStaphyliniformiaAnimaliaEcology Evolution Behavior and SystematicsMyxophagaEkologibiodiversity Informatics; coleoptera; fauna europaea; taxonomic indexingPharotarsusArchostemata15. Life on landbiology.organism_classificationArchostematalcsh:Biology (General)NotchiaBiodiversity InformaticsEcdysozoaTaxonomic indexingTaxonomic indexing.CucujoideaGlobal biodiversity
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Plot - A new tool for global vegetation analyses

2019

23Biodiversity Conservation Department, ISPRA – Italian National Institute for Environmental Protection and Research, Rome, Italy

0106 biological sciencesGender and DiversityBos- en LandschapsecologieBiomeэкология сообществPlant Scienceэкоинформатика[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy01 natural sciencesAbundance (ecology)EcoinformaticsForest and Landscape EcologyMacroecologyResearch methodology and philosophyрастительностьbiodiversityEcologyvascular plantPlot база данныхVegetation[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/BotanicsPE&RCfunctional diversityGeography580: Pflanzen (Botanik)Ecosystems Researchvegetation relevémacroecologyPlantenecologie en Natuurbeheerphylogenetic diversityVegetatie Bos- en Landschapsecologievegetation relevebiodiversity ; community ecology ; ecoinformatics ; functional diversity ; global scale ; macroecology ; phylogenetic diversity ; plot database ; staxonomic ; diversity ; vascular plant ; vegetation relevé/dk/atira/pure/core/keywords/nachhaltigkeitswissenschaftContext (language use)Plant Ecology and Nature Conservationecoinformatic010603 evolutionary biologySustainability Scienceecoinformatics[SDV.EE.ECO]Life Sciences [q-bio]/Ecology environment/EcosystemsEcoinformaticsbiodiversity; community ecology; ecoinformatics; functional diversity; global scale; macroecology; phylogenetic diversity; plot database; sPlot; taxonomic diversity; vascular plant; vegetation relevé577: Ökologieplot database/dk/atira/pure/core/keywords/biologyVegetatieVegetationsPlotPlant communityMacroecology Phylogenetic diversitybiodiversity; community ecology; ecoinformatics; functional diversity; global scale; macroecology; phylogenetic diversity; plot database; sPlot; taxonomic diversity; vascular plant; vegetation releve15. Life on landтаксономическое разнообразиеtaxonomic diversityglobal scaleбиоразнообразиеCrop husbandrySpecies richnessPhysical geographyVegetation Forest and Landscape Ecology[SDE.BE]Environmental Sciences/Biodiversity and Ecology/dk/atira/pure/core/keywords/gender_and diversityфилогенетическое разнообразиемакроэкологияcommunity ecology010606 plant biology & botany
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Improving the conservation of Mediterranean Chondrichthyans : the ELASMOMED DNA barcode reference library

2017

Cartilaginous fish are particularly vulnerable to anthropogenic stressors and environmental change because of their K-selected reproductive strategy. Accurate data from scientific surveys and landings are essential to assess conservation status and to develop robust protection and management plans. Currently available data are often incomplete or incorrect as a result of inaccurate species identifications, due to a high level of morphological stasis, especially among closely related taxa. Moreover, several diagnostic characters clearly visible in adult specimens are less evident in juveniles. Here we present results generated by the ELASMOMED Consortium, a regional network aiming to sample …

0106 biological sciencesHeredityMolecular biologySpeciationBiodiversitySettore BIO/05 - Zoologialcsh:MedicineJuvenileEvolutionary biologyBarcodeBiochemistry01 natural sciencesDNA barcodinglaw.inventionlawDNA librarieslcsh:ScienceChondrichthyesSpecimens IdentificationData ManagementMolecular systematicsMultidisciplinaryGeographyMediterranean RegionEcologyCryptic speciationFishesBiodiversityMorphological stasiMitochondrial DNANucleic acidsGenetic MappingPhylogeographyBiogeographyDNA Barcode Reference LibraryDNA barcoding TaxonomicVertebratesDNA data banksResearch ArticleComputer and Information SciencesConservation of Natural ResourcesEvolutionary ProcessesEvolutionary systematicsBarcoding Chondrichthyans Conservation Mediterranean Sea mtDNACartilaginous fishConservationBiologyPhylogeographic structure010603 evolutionary biologyMolecular taxonomySpecies SpecificityEndemic SpeciesGeneticsMediterranean SeaAnimalsDNA Barcoding TaxonomicDNA barcoding14. Life underwaterEndemismTaxonomyPopulation Biology010604 marine biology & hydrobiologylcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesDNAResearch and analysis methodsPhylogeographyMolecular biology techniquesTaxonHaplotypesThreatened speciesEarth SciencesSharksConservation statuslcsh:QPopulation GeneticsMarine biodiversity conservationElasmobranchii
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New and poorly known Holarctic species of Boletina Staeger, 1840 (Diptera, Mycetophilidae)

2016

The genus Boletina is a species rich group of fungus gnats. Members of the genus are mainly known from temperate, boreal and arctic biomes. Phylogeny of the genus is still poorly resolved, dozens of species are insufficiently described and undescribed species are often discovered, especially from samples taken from the boreal zone. Four new species are described. Boletina valteri Salmela sp.n. (Finland), Boletina kullervoi Salmela sp.n. (Finland), B. hyperborea Salmela sp.n. (Finland, Norway, Sweden, Canada) and B. nuortti Salmela sp.n. (Finland). Boletina arctica Holmgren is redescribed and reported for the first time from the Canadian high arctic zone. Boletina borealis Zetterstedt and B.…

0106 biological sciencesInsectaArthropodata1172Northern Europearctic zone010603 evolutionary biology01 natural sciencestaxonomyHolarcticAnimaliaspecies richnessFaunistics & DistributionEcology Evolution Behavior and SystematicsBoreal zoneEcologybiologyHyperboreaEcologyDipterata1183biology.organism_classificationMycetophilidaeYukonfungus gnatsBoreal zone010602 entomologyboreaalinen vyöhykeArcticBoletinata1181Taxonomy (biology)Species richnessTaxonomic PaperMycetophilidaeBiodiversity data journal
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Re-description of Orchestia stephenseni Cecchini, 1928: designation of neotype and senior synonym to Orchestia constricta A. Costa, 1853 (Crustacea: …

2016

The beach flea Orchestia stephenseni was originally described by Cecchini (1928), and successively by Karaman (1973). The description of this species will be herein revised by focusing on the variation of the g nathopod 2 in males, as detected during its growth period. An analysis of DNA Barcoding was performed to support the assignment of the taxonomic species to five morphotypes. As the type specimen has not yet been designated, a neotype is assigned. The name of the species is here presented as a valid name as it satisfies the requirements of a Reversal of the Principle of Priority: Orchestia stephenseni takes precedence over the objective synonym Orchestia constricta A. Costa, 1853, in …

0106 biological sciencesMaleMarine beach fleaArthropodaSettore BIO/05 - ZoologiaTalitridae010501 environmental sciences01 natural sciencesValid nameMediterranean SeaAnimaliaAnimalsBody SizeDNA Barcoding TaxonomicAmphipodaMalacostracaSicilyEcology Evolution Behavior and SystematicsPhylogeny0105 earth and related environmental sciencesTaxonomyAmphipoda; DNA Barcoding; Marine beach flea; Orchestia stephenseni; Talitridae; Ecology Evolution Behavior and Systematics; Animal Science and ZoologybiologyEcology010604 marine biology & hydrobiologyInternational Code of Zoological NomenclatureAnimal StructuresBiodiversityOrchestiabiology.organism_classificationEcology Evolution Behavior and SystematicDNA BarcodingSynonym (taxonomy)TalitridaeOrchestia stephenseniPrinciple of PriorityAnimal Science and ZoologyType specimenNomen oblitumZootaxa
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Synthetic cartography for mapping biodiversity in the Mediterranean region: Sicily as a case study

2018

This paper proposes a new hierarchical land classification system for the mapping of species distribution at national or regional scales. Our integrative framework incorporates two hierarchical levels inferred from historical, climatic, geomorphological and geological attributes. The feasibility of this proposal is based on the use of historical collections and literature data, as well as on its ability to combine old low-precision data with more recent records of higher resolution. The system is set up for vascular plants, but it can also be used for other taxonomic groups. Furthermore, it has the potential for application to the whole Mediterranean region because it is based on informatio…

0106 biological sciencesMediterranean climateCartographyGeographic information systemConservation Biologyspatial analysisSpecies distributionBiodiversity & Conservationdata analysisBiodiversityDistribution (economics)Plant Science010603 evolutionary biology01 natural sciencesRemote Sensing and GISFloristics & DistributionPlant sciencelcsh:BotanydistributionTaxonomic rankEcology Evolution Behavior and Systematicsbiological collectionsbusiness.industryplantsSouthern Europe and MediterraneanData analysiPlantSpecies InventoriesEcology Evolution Behavior and Systematiclcsh:QK1-989GIS softwareGeographyAngiospermaeBiogeographySpatial analysiBiological collectionbusinessCartography010606 plant biology & botanyResearch ArticlePhytoKeys
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Environmental filtering and spatial effects on metacommunity organisation differ among littoral macroinvertebrate groups deconstructed by biological …

2018

We examined spatial and environmental effects on the deconstructed assemblages of littoral macroinvertebrates within a large lake. We deconstructed assemblages by three biological trait groups: body size, dispersal mode and oviposition behaviour. We expected that spatial effects on assemblage structuring decrease and environmental effects increase with increasing body size. We also expected stronger environmental filtering and weaker spatial effect on the assemblages of flying species compared with assemblages of non-flying species. Stronger effect of environmental filtering was expected on the assemblages with species attaching eggs compared with assemblages of species with free eggs. We u…

0106 biological sciencesMetacommunitymetacommunity organizationEcology010604 marine biology & hydrobiologyfungiAquatic ScienceBiologyBody size010603 evolutionary biology01 natural sciencesbiological traitsjärvetekologinen lokerobiologiset ominaisuudetLittoral zoneTraitBiological dispersalniche widthEcosystemTaxonomic rankEcology Evolution Behavior and Systematicslarge lakesInvertebrate
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