Search results for "thaliana"

showing 10 items of 136 documents

The ER-Membrane Transport System Is Critical for Intercellular Trafficking of the NSm Movement Protein and Tomato Spotted Wilt Tospovirus.

2015

Plant viruses move through plasmodesmata to infect new cells. The plant endoplasmic reticulum (ER) is interconnected among cells via the ER desmotubule in the plasmodesma across the cell wall, forming a continuous ER network throughout the entire plant. This ER continuity is unique to plants and has been postulated to serve as a platform for the intercellular trafficking of macromolecules. In the present study, the contribution of the plant ER membrane transport system to the intercellular trafficking of the NSm movement protein and Tomato spotted wilt tospovirus (TSWV) is investigated. We showed that TSWV NSm is physically associated with the ER membrane in Nicotiana benthamiana plants. An…

RNA viruses0301 basic medicineLeavesCell MembranesNicotiana benthamianaPlant ScienceEndoplasmic ReticulumPathology and Laboratory MedicineBiochemistrySolanum lycopersicumTospovirusBunyavirusesMedicine and Health SciencesArabidopsis thalianaMovement proteinBiology (General)Integral membrane proteinSecretory PathwaybiologyPlant BiochemistryPlant AnatomyPlasmodesmataProteïnes de membranafood and beveragesPlantsPlants Genetically ModifiedCell biologyTransport proteinPlant Viral Movement ProteinsProtein TransportMedical MicrobiologyCell ProcessesViral PathogensVirusesPathogensCellular Structures and OrganellesTomato Spotted Wilt VirusResearch ArticleBioquímicaCell PhysiologyQH301-705.5Arabidopsis ThalianaImmunologyPlant PathogensBrassicaPlasmodesmaResearch and Analysis MethodsMicrobiologyPlant Viral Pathogens03 medical and health sciencesModel OrganismsPlant and Algal ModelsVirologyTobaccoGeneticsIntegral Membrane ProteinsSecretionMicrobial PathogensMolecular BiologyPlant DiseasesBiology and life sciencesEndoplasmic reticulumfungiOrganismsMembrane ProteinsCell BiologyPlant PathologyRC581-607biology.organism_classificationVirosis (Plantes)VirologyPlant Leaves030104 developmental biologyMembrane TraffickingParasitologyImmunologic diseases. AllergyPLoS Pathogens
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A genetic approach reveals different modes of action of prefoldins

2021

17 p.-7 fig.

Regular IssueAcademicSubjects/SCI01280PhysiologyProtein subunitMutantArabidopsisPlant ScienceChaperonin03 medical and health sciences0302 clinical medicineArabidopsisGeneticsBIOQUIMICA Y BIOLOGIA MOLECULARArabidopsis thalianaTranscription factorActinResearch Articles030304 developmental biology0303 health sciencesAcademicSubjects/SCI01270biologyErrataArabidopsis ProteinsAcademicSubjects/SCI02288AcademicSubjects/SCI02287AcademicSubjects/SCI02286Genes Development and EvolutionPrefoldin complexbiology.organism_classificationCell biologyGENETICA030217 neurology & neurosurgeryMolecular ChaperonesTranscription Factors
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Copper and iron homeostasis inArabidopsis: responses to metal deficiencies, interactions and biotechnological applications

2007

Plants have developed sophisticated mechanisms to tightly control the acquisition and distribution of copper and iron in response to environmental fluctuations. Recent studies with Arabidopsis thaliana are allowing the characterization of the diverse families and components involved in metal uptake, such as metal-chelate reductases and plasma membrane transporters. In parallel, emerging data on both intra- and intercellular metal distribution, as well as on long-distance transport, are contributing to the understanding of metal homeostatic networks in plants. Furthermore, gene expression analyses are deciphering coordinated mechanisms of regulation and response to copper and iron limitation…

Regulation of gene expressionchemistry.chemical_classificationbiologyPhysiologychemistry.chemical_elementPlant Sciencebiology.organism_classificationCopperCell biologyMetalIron homeostasischemistryArabidopsisvisual_artBotanyMetalloproteinvisual_art.visual_art_mediumArabidopsis thalianaIron deficiency (plant disorder)Plant, Cell & Environment
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ZFWD: a novel subfamily of plant proteins containing a C3H zinc finger and seven WD40 repeats

2000

We describe a new subfamily of WD repeat proteins characterised by the presence of a C3H zinc finger at the N-terminal part of the protein associated with seven WD40 repeats. We have identified four members of this subfamily in Arabidopsis thaliana, one of them with associated expressed sequence tags (ESTs). We have also identified homologous ESTs in rice, cotton, maize, poplar, pine tree and the ice plant. We do not observe animal homologues, suggesting that this subfamily could be specific for plants. Our data suggest an important role for these proteins. Based on the high sequence conservation within the conserved domains, we suggest that these proteins could have a regulatory function.

Repetitive Sequences Amino AcidDNA ComplementarySubfamilyDNA PlantMolecular Sequence DataArabidopsisSequence alignmentBiologyEvolution MolecularWD40 repeatGeneticsProtein IsoformsArabidopsis thalianaAmino Acid SequencePeptide sequencePhylogenyPlant ProteinsExpressed Sequence TagsGeneticsZinc fingerExpressed sequence tagProtein subfamilySequence Homology Amino AcidArabidopsis Proteinsfungifood and beveragesZinc FingersSequence Analysis DNAGeneral Medicinebiology.organism_classificationSequence AlignmentGene
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Repeatability in protein sequences

2019

Low complexity regions (LCRs) in protein sequences have special properties that are very different from those of globular proteins. The rules that define secondary structure elements do not apply when the distribution of amino acids becomes biased. While there is a tendency towards structural disorder in LCRs, various examples, and particularly homorepeats of single amino acids, suggest that very short repeats could adopt structures very difficult to predict. These structures are possibly variable and dependant on the context of intra- or inter-molecular interactions. In general, short repeats in LCRs can induce structure. This could explain the observation that very short (non-perfect) rep…

Repetitive Sequences Amino AcidGlobular proteinSaccharomyces cerevisiaeContext (language use)Computational biologyProtein–protein interactionEvolution Molecular03 medical and health sciencesSequence Analysis ProteinStructural BiologyHumansArabidopsis thalianaAmino Acid SequenceDatabases ProteinProtein secondary structure030304 developmental biologychemistry.chemical_classification0303 health sciencesbiology030302 biochemistry & molecular biologyProteinsbiology.organism_classificationAmino acidchemistrySequence AlignmentAlgorithmsFunction (biology)Journal of Structural Biology
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Homeostatic control of polyamine levels under long-term salt stress in Arabidopsis

2011

Salt stress has been frequently studied in its first osmotic phase. Very often, data regarding the second ionic phase is missing. It has also been suggested that Putrescine or/and Spermine could be responsible for salt resistance. In order to test this hypothesis under long-term salt stress, we obtained Arabidopsis thaliana transgenic plants harboring pRD29A::oatADC or pRD29A::GUS construction. Although Putrescine was the only polyamine significantly increased after salt acclimation in pRD29A::oatADC transgenic lines, this rendered in no advantage to this kind of stress. The higher Spermine levels found in WT and transgenic lines when compared to control conditions along with no increment o…

SalinityCarboxy-lyasesAvenaCarboxy-LyasesAcclimatizationArabidopsisSperminePlant ScienceAcclimatizationchemistry.chemical_compoundStress PhysiologicalArabidopsisPolyaminesHomeostasisArabidopsis thalianaPromoter Regions GeneticAbscisic acidbiologyArabidopsis ProteinsPlants Genetically Modifiedbiology.organism_classificationchemistryBiochemistryPutrescinePolyamineResearch PaperAbscisic AcidSignal TransductionPlant Signaling & Behavior
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New insights into the role of spermine in Arabidopsis thaliana under long-term salt stress

2010

Polyamines (putrescine, spermidine and spermine) are traditionally implicated in the response of plants to environmental cues. Free spermine accumulation has been suggested as a particular feature of long-term salt stress, and in the model plant Arabidopsis thaliana the spermine synthase gene (AtSPMS) has been reported as inducible by abscisic acid (ABA) and acute salt stress treatments. With the aim to unravel the physiological role of free spermine during salinity, we analyzed polyamine metabolism in A. thaliana salt-hypersensitive sos mutants (salt overlay sensitive; sos1-1, sos2-1 and sos3-1), and studied the salt stress tolerance of the mutants in spermine and thermospermine synthesis …

SalinitySpermine SynthaseMutantArabidopsisSperminePlant ScienceSodium ChlorideGenes Plantchemistry.chemical_compoundPlant Growth RegulatorsGene Expression Regulation PlantGeneticsArabidopsis thalianaAbscisic acidbiologyBiogenic PolyaminesGenetic VariationSalt ToleranceGeneral Medicinebiology.organism_classificationSalinitySpermidinechemistryBiochemistrySpermine synthasePutrescinebiology.proteinSpermineAgronomy and Crop SciencePlant Science
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Evolution and functional differentiation of recently diverged phytochelatin synthase genes from Arundo donax L.

2019

Plant phytochelatin synthases undergo evolutionarily rapid functional differentiation after duplication, allowing fast and precise adjustment of metal detoxification capacity by modulation of both transcription and enzymatic activity.

Settore BIO/01 - BOTANICA GENERALE0106 biological sciences0301 basic medicineGene duplicationPhysiologyArabidopsisSaccharomyces cerevisiaePlant SciencePoaceae01 natural sciencesGenomeDivergenceEvolution Molecular03 medical and health sciencesGene Expression Regulation Plantcadmium; divergence; gene duplication; giant reed; phytochelatin synthase; phytochelatins; subfunctionalizationSubfunctionalizationPhytochelatinsArabidopsis thalianaAmino Acid SequenceGenePhylogenyPlant ProteinsGeneticsNatural selectionGiant reedbiologyArundo donaxAminoacyltransferasesPlants Genetically Modifiedbiology.organism_classificationResearch PapersPhenotype030104 developmental biologyPlant—Environment InteractionsSubfunctionalizationPhytochelatinMicroorganisms Genetically-ModifiedPhytochelatin synthaseSequence AlignmentCadmium010606 plant biology & botanyJournal of Experimental Botany
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AtPGAP1 functions as a GPI inositol-deacylase required for efficient transport of GPI-anchored proteins

2021

Abstract Glycosylphosphatidylinositol (GPI)-anchored proteins (GPI-APs) play an important role in a variety of plant biological processes including growth, stress response, morphogenesis, signaling, and cell wall biosynthesis. The GPI anchor contains a lipid-linked glycan backbone that is synthesized in the endoplasmic reticulum (ER) where it is subsequently transferred to the C-terminus of proteins containing a GPI signal peptide by a GPI transamidase. Once the GPI anchor is attached to the protein, the glycan and lipid moieties are remodeled. In mammals and yeast, this remodeling is required for GPI-APs to be included in Coat Protein II-coated vesicles for their ER export and subsequent t…

Signal peptideGlycanGenotypePhysiologyGlycosylphosphatidylinositolsPlant ScienceGenes Plantchemistry.chemical_compoundGene Expression Regulation PlantArabidopsisGeneticsArabidopsis thalianaInositolbiologyChemistryArabidopsis ProteinsEndoplasmic reticulumGenetic VariationMembrane Proteinsbiology.organism_classificationYeastPhosphoric Monoester HydrolasesCell biologyFocus Issue on Transport and Signalingcarbohydrates (lipids)Protein Transportbiology.proteinlipids (amino acids peptides and proteins)Function (biology)
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The Arabidopsis Copper Transporter COPT1 Functions in Root Elongation and Pollen Development

2004

Copper plays a dual role in aerobic organisms, as both an essential and a potentially toxic element. To ensure copper availability while avoiding its toxic effects, organisms have developed complex homeostatic networks to control copper uptake, distribution, and utilization. In eukaryotes, including yeasts and mammals, high affinity copper uptake is mediated by the Ctr family of copper transporters. This work is the first report on the physiological function of copper transport in Arabidopsis thaliana. We have studied the expression pattern of COPT1 in transgenic plants expressing a reporter gene under the control of the COPT1 promoter. The reporter gene is highly expressed in embryos, tric…

TransgeneArabidopsisDown-Regulationchemistry.chemical_elementPlant RootsBiochemistrychemistry.chemical_compoundGenes ReporterArabidopsisArabidopsis thalianaRNA MessengerTransgenesMolecular BiologyCopper Transporter 1Reporter geneDose-Response Relationship DrugbiologyArabidopsis ProteinsReverse Transcriptase Polymerase Chain ReactionMembrane Transport ProteinsBiological TransportTransporterCell BiologyOligonucleotides AntisensePlants Genetically Modifiedbiology.organism_classificationCopperTrichomeUp-RegulationBiochemistrychemistryMicroscopy Electron ScanningPollenGrowth inhibitionCopperPhenanthrolinesPlasmidsJournal of Biological Chemistry
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