Search results for "theory"

showing 10 items of 24627 documents

Evolution of bacterial life-history traits is sensitive to community structure

2016

Very few studies have experimentally assessed the evolutionary effects of species interactions within the same trophic level. Here we show that when Serratia marcescens evolve in multispecies communities, their growth rate exceeds the growth rate of the bacteria that evolved alone, whereas the biomass yield gets lower. In addition to the community effects per se, we found that few species in the communities caused strong effects on S. marcescens evolution. The results indicate that evolutionary responses (of a focal species) are different in communities, compared to species evolving alone. Moreover, selection can lead to very different outcomes depending on the community structure. Such con…

0106 biological sciences0301 basic medicineExperimental evolutionEcologymedia_common.quotation_subjectCommunity structureSpecies diversityContext (language use)Biologybiology.organism_classification010603 evolutionary biology01 natural sciencesCompetition (biology)Life history theory03 medical and health sciences030104 developmental biologySerratia marcescensGeneticsGeneral Agricultural and Biological SciencesEcology Evolution Behavior and Systematicsmedia_commonTrophic levelEvolution
researchProduct

Olfactory cues and the value of information: voles interpret cues based on recent predator encounters

2018

Abstract Prey strategically respond to the risk of predation by varying their behavior while balancing the tradeoffs of food and safety. We present here an experiment that tests the way the same indirect cues of predation risk are interpreted by bank voles, Myodes glareolus, as the game changes through exposure to a caged weasel. Using optimal patch use, we asked wild-caught voles to rank the risk they perceived. We measured their response to olfactory cues in the form of weasel bedding, a sham control in the form of rabbit bedding, and an odor-free control. We repeated the interviews in a chronological order to test the change in response, i.e., the changes in the value of the information.…

0106 biological sciences0301 basic medicineForagingZoologyContext (language use)Perceived riskEvolutionary game theoryBiologyPredator-prey interactions010603 evolutionary biology01 natural sciencesPredation03 medical and health sciencesbiology.animalPredatorEcology Evolution Behavior and SystematicsGiving-up densityY-mazebiology.organism_classification030104 developmental biologyOdorAnimal ecologyWeaselAnimal Science and ZoologyVoleOriginal ArticleBehavioral Ecology and Sociobiology
researchProduct

A genetic study on subtropical Anadenanthera colubrina (Vell.) Brenan var. cebil (Griseb.) Altschul tree from Northwestern Argentina

2017

Anadenanthera colubrina (Vell.) Brenan var. cebil (Griseb.) Altschul is a tree species in South America important for its cultural, economic, and medicinal uses. In addition, it represents a trace in memory of the forests that have decreased over the years and for this reason it is not only interesting to study but also important to preserve the tree species for future generations. In this paper, we have characterized the genetic diversity of four populations. We collected seeds from four different sites: San Bernardo (B), El Cebilar (C), Metán (M), and El Gallinato (G) in Salta Province, North Argentina. We then compared the intergenic transcribed sequences of ribosomal DNA, a known geneti…

0106 biological sciences0301 basic medicineGenetic diversitybiologyconservationColubrinaForestrySubtropicsBiodiversitybotanybiology.organism_classificationBiodiversity; botany; deforestation; conservation; phylogenetic010603 evolutionary biology01 natural sciencesGenetic analysis03 medical and health sciencesTree (descriptive set theory)030104 developmental biologyIntergenic regionBotanySettore BIO/03 - Botanica Ambientale E ApplicatadeforestationphylogeneticAnadenanthera colubrinaRibosomal DNA
researchProduct

Life history evolution in social insects: a female perspective

2016

Social insects are known for their unusual life histories with fecund, long-lived queens and sterile, short-lived workers. We review ultimate factors underlying variation in life history strategies in female social insects, whose social life reshapes common trade-offs, such as the one between fecundity and longevity. Interspecific life history variation is associated with colony size, mediated by changes in division of labour and extrinsic mortality. In addition to the ratio of juvenile to adult mortality, social factors such as queen number influence life history trajectories. We discuss two hypotheses explaining why queen fecundity and lifespan is higher in single-queen societies and sugg…

0106 biological sciences0301 basic medicineInsectaHARVESTER ANTmedia_common.quotation_subjectLongevityHYMENOPTERAFertilityCOLONY SIZEKin selectionBiology010603 evolutionary biology01 natural sciencesLife history theory03 medical and health sciencesAnimalsJuvenileSocial BehaviorEUSOCIALITYLife History TraitsEcology Evolution Behavior and Systematicsmedia_commonBehavior AnimalEcologyKIN SELECTIONLongevityWORKERSQUEENSPANFecundityEusocialityREPRODUCTIONFertility030104 developmental biologyInsect ScienceANT COLONIESFemaleDivision of labour
researchProduct

Genetic variation in plasticity of life-history traits between Atlantic cod (Gadus morhua) populations exposed to contrasting thermal regimes

2016

We employed common-garden experiments to test for genetic variation in responses of larval life-history traits to temperature between two populations of Atlantic cod (Gadus morhua L., 1758) that naturally experience contrasting thermal environments during early life due to spatial and temporal differences in spawning. Southern Gulf of St. Lawrence cod larvae experienced faster growth in warmer water and low, uniform survival across all experimental temperatures (3, 7, 11 °C), consistent with previous studies on this spring-spawning population. In contrast, larvae from fall-spawning Southwestern Scotian Shelf cod collected near Sambro, Nova Scotia, lacked plasticity for growth but experienc…

0106 biological sciences0301 basic medicineLarvaeducation.field_of_studybiologyEcologyPopulationPlasticitybiology.organism_classification010603 evolutionary biology01 natural sciencesEarly lifeLife history theory03 medical and health sciences030104 developmental biologyGenetic variationGadusAnimal Science and ZoologyAtlantic codeducationEcology Evolution Behavior and SystematicsCanadian Journal of Zoology
researchProduct

Phenological and intrinsic predictors of mite and haemacoccidian infection dynamics in a Mediterranean community of lizards

2021

Ectotherms are vulnerable to environmental changes and their parasites are biological health indicators. Thus, parasite load in ectotherms is expected to show a marked phenology. This study investigates temporal host–parasite dynamics in a lizard community in Eastern Spain during an entire annual activity period. The hosts investigated were Acanthodactylus erythrurus, Psammodromus algirus and Psammodromus edwardsianus, three lizard species coexisting in a mixed habitat of forests and dunes, providing a range of body sizes, ecological requirements and life history traits. Habitat and climate were considered as potential environmental predictors of parasite abundance, while size, body conditi…

0106 biological sciences0301 basic medicineMaleMite InfestationsRange (biology)ForestsParasitemia010603 evolutionary biology01 natural sciencesParasite loadParasite LoadLife history theory03 medical and health scienceshost–parasite dynamicsAbundance (ecology)Sandbiology.animalLacertidaeAnimalsEcological interactionsEcosystemAcanthodactylus erythrurusbiologyLizardEcologyCoccidiosisLizardsbiology.organism_classificationCoccidia030104 developmental biologyInfectious DiseasesSpainEctothermLinear ModelsAnimal Science and ZoologyParasitologyFemaleLacertidaeparasite phenologyResearch ArticleIberian PeninsulaParasitology
researchProduct

Kineococcus vitellinus sp. nov., Kineococcus indalonis sp. nov. and Kineococcus siccus sp. nov., isolated nearby the Tabernas desert (Almería, Spain)

2020

This article belongs to the Section Environmental Microbiology.

0106 biological sciences0301 basic medicineMicrobiology (medical)Kineococcus siccusKineococcus indalonismedicine.disease_cause010603 evolutionary biology01 natural sciencesMicrobiologyArticle03 medical and health sciencesKineococcus radiotoleransNew taxaVirologyTheoryofComputation_ANALYSISOFALGORITHMSANDPROBLEMCOMPLEXITYBotanymedicineBiocrustKineococcusKineococcus vitellinuslcsh:QH301-705.5biologyStrain (chemistry)biology.organism_classification16S ribosomal RNATabernas desertAlmeria030104 developmental biologylcsh:Biology (General)GenBankKineococcus gypseusBacteria
researchProduct

2021

Predator-induced plasticity in life-history and antipredator traits during the larval period has been extensively studied in organisms with complex life-histories. However, it is unclear whether different levels of predation could induce warning signals in aposematic organisms. Here, we investigated whether predator-simulated handling affects warning coloration and life-history traits in the aposematic wood tiger moth larva, Arctia plantaginis. As juveniles, a larger orange patch on an otherwise black body signifies a more efficient warning signal against predators but this comes at the costs of conspicuousness and thermoregulation. Given this, one would expect that an increase in predation…

0106 biological sciences0301 basic medicinePhenotypic plasticityLarvaEcologyForagingZoologyAposematismBiologyTrade-off010603 evolutionary biology01 natural sciencesLife history theoryPredation03 medical and health sciences030104 developmental biologyPredatorEcology Evolution Behavior and SystematicsFrontiers in Ecology and Evolution
researchProduct

X!TandemPipeline: a tool to manage sequence redundancy for protein inference and phosphosite identification

2017

X!TandemPipeline is a software designed to perform protein inference and to manage redundancy in the results of phosphosite identification by database search. It provides the minimal list of proteins or phosphosites that are present in a set of samples using grouping algorithms based on the principle of parsimony. Regarding proteins, a two-level classification is performed, where groups gather proteins sharing at least one peptide and subgroups gather proteins that are not distinguishable according to the identified peptides. Regarding phosphosites, an innovative approach based on the concept of phosphoisland is used to gather overlapping phosphopeptides. The graphical interface of X!Tandem…

0106 biological sciences0301 basic medicinePhosphopeptidesProteomicsphosphopeptideComputer sciencecomputer.internet_protocolcomputer.software_genre01 natural sciencesBiochemistrydatabase search03 medical and health sciencesSearch engineUser-Computer InterfaceRedundancy (information theory)SoftwareTandem Mass Spectrometry[ INFO.INFO-BI ] Computer Science [cs]/Bioinformatics [q-bio.QM]HumansDatabase search engineAmino Acid SequenceDatabases ProteinGraphical user interfacemass spectrometrybusiness.industrysoftwareprotein inferenceProteinsGeneral ChemistrybioinformaticsSearch EngineBenchmarking030104 developmental biologyComputingMethodologies_PATTERNRECOGNITIONProtein inferenceData mining[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]businesscomputerXMLAlgorithms010606 plant biology & botany
researchProduct

Simultaneous speciation in the European high mountain flowering plant genus Facchinia (Minuartia s.l., Caryophyllaceae) revealed by genotyping-by-seq…

2017

Understanding the relative importance of different mechanisms of speciation in a given lineage requires fully resolved interspecific relationships. Using Facchinia, a genus of seven species centred in the European Alps, we explore whether the polytomy found by Sanger sequencing analyses of standard nuclear (ITS) and plastid markers (trnQ-rps16) is a hard or soft polytomy by substantially increasing the amount of DNA sequence data, generated by genotyping-by-sequencing. In comparison to 142 phylogenetically informative sites in the Sanger sequences the GBS sequences yielded 3363 phylogenetically informative sites after exclusion of apparently oversaturated SNPs. Maximum parsimony, maximum li…

0106 biological sciences0301 basic medicinePolytomyDNA PlantGenotypeGenetic SpeciationLineage (evolution)CaryophyllaceaeBiology010603 evolutionary biology01 natural sciencesCoalescent theoryEvolution Molecular03 medical and health sciencessymbols.namesakePhylogeneticsGeneticsPlastidsMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsGeneticsSanger sequencingPhylogenetic treeSequence Analysis DNAMaximum parsimony030104 developmental biologyMolecular phylogeneticssymbolsHybridization GeneticMolecular Phylogenetics and Evolution
researchProduct