Search results for "three-dimensional"

showing 10 items of 370 documents

Estimation of the elastic parameters of human liver biomechanical models by means of medical images and evolutionary computation.

2013

This paper presents a method to computationally estimate the elastic parameters of two biomechanical models proposed for the human liver. The method is aimed at avoiding the invasive measurement of its mechanical response. The chosen models are a second order Mooney–Rivlin model and an Ogden model. A novel error function, the geometric similarity function (GSF), is formulated using similarity coefficients widely applied in the field of medical imaging (Jaccard coefficient and Hausdorff coefficient). This function is used to compare two 3D images. One of them corresponds to a reference deformation carried out over a finite element (FE) mesh of a human liver from a computer tomography image, …

Mathematical optimizationSimilarity (geometry)Jaccard indexPhysics::Medical PhysicsEvolutionary algorithmHealth InformaticsModels BiologicalEvolutionary computationImaging Three-DimensionalJaccardScatter searchImage Interpretation Computer-AssistedGenetic algorithmHumansBiomechanical modeling Genetic algorithm Hausdorff Jaccard Liver Scatter searchMathematicsFunction (mathematics)Biological EvolutionFinite element methodBiomechanical PhenomenaComputer Science ApplicationsError functionGenetic algorithmLiverHausdorffBiomechanical modelingLENGUAJES Y SISTEMAS INFORMATICOSAlgorithmSoftware
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Large Depth-of-Field Integral Microscopy by Use of a Liquid Lens

2018

Integral microscopy is a 3D imaging technique that permits the recording of spatial and angular information of microscopic samples. From this information it is possible to calculate a collection of orthographic views with full parallax and to refocus computationally, at will, through the 3D specimen. An important drawback of integral microscopy, especially when dealing with thick samples, is the limited depth of field (DOF) of the perspective views. This imposes a significant limitation on the depth range of computationally refocused images. To overcome this problem, we propose here a new method that is based on the insertion, at the pupil plane of the microscope objective, of an electrical…

MicroscopeComputer scienceOptical powerthree-dimensional image acquisitionthree-dimensional microscopylcsh:Chemical technology01 natural sciencesBiochemistryPupilArticlethree-dimensional image processingAnalytical Chemistrylaw.invention010309 opticsOpticslaw0103 physical sciencesMicroscopylcsh:TP1-1185Depth of fieldElectrical and Electronic EngineeringInstrumentation010302 applied physicsbusiness.industryOrthographic projectionAtomic and Molecular Physics and OpticsNumerical apertureMicroscòpiaCardinal pointFocus (optics)ParallaxbusinessImatges ProcessamentSensors
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A microscope configuration for nanometer 3-D movement monitoring accuracy.

2011

In this paper we present a new microscopy configuration based upon temporal tracking of a secondary reflected speckle by imaging the speckle through properly defocused optics. The configuration is used to monitor three-dimensional (3-D) spontaneous contraction of rat cardiac muscle cells while achieving nanometer tracking accuracy at a rate of 30 frames per second (fps) without using interferometric recording. Estimation of the change in the optical path of accuracy of 50 nm in the transverse direction and of 200 nm in the axial direction was achieved.

MicroscopyMicroscopeMaterials sciencebusiness.industryFourier opticsGeneral Physics and AstronomyCell BiologyTracking (particle physics)Frame ratelaw.inventionRatsSpeckle patternInterferometryOpticsOptical pathImaging Three-DimensionalStructural BiologylawMicroscopyAnimalsGeneral Materials ScienceMyocytes CardiacbusinessCells CulturedMicron (Oxford, England : 1993)
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Handheld and cost-effective Fourier lightfield microscope

2022

In this work, the design, building, and testing of the most portable, easy-to-build, robust, handheld, and cost-effective Fourier Lightfield Microscope (FLMic) to date is reported. The FLMic is built by means of a surveillance camera lens and additional off-the-shelf optical elements, resulting in a cost-effective FLMic exhibiting all the regular sought features in lightfield microscopy, such as refocusing and gathering 3D information of samples by means of a single-shot approach. The proposed FLMic features reduced dimensions and light weight, which, combined with its low cost, turn the presented FLMic into a strong candidate for in-field application where 3D imaging capabilities are pursu…

MicroscopyMicroscòpiaImaging Three-Dimensionalmicroscopy; light-field; 3D imagingCost-Benefit AnalysisElectrical and Electronic EngineeringÒpticaBiochemistryInstrumentationAtomic and Molecular Physics and OpticsAnalytical Chemistry
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Design of a Three-Dimensional-Printed Surgical Glove for Minimal-Incision Podiatric Surgery.

2019

Background: Precision in minimal-incision surgery allows surgeons to achieve accurate osteotomies and patients to avoid risks. Herein, a surgical guide for the foot is designed and validated in vitro using resin foot models for hallux abducto valgus surgery. Methods: Three individuals with different experience levels (an undergraduate student, a master's student, and an experienced podiatric physician) performed an Akin osteotomy, a Reverdin osteotomy, and a basal osteotomy of the first metatarsal. Results: The average measurements of each osteotomy and the angle of the basal osteotomy do not reveal significant differences among the three surgeons. A shorter deviation from the planned meas…

Models Anatomic030222 orthopedicsmedicine.medical_specialtybusiness.industryFootPodiatryMEDLINE030229 sport sciencesGeneral MedicineMinimal incisionSurgeryOsteotomy03 medical and health sciences0302 clinical medicinePrinting Three-DimensionalmedicineHumansMinimally Invasive Surgical ProceduresClinical CompetenceFoot surgeryClinical competencePodiatrybusinessFoot (unit)Journal of the American Podiatric Medical Association
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Development of software in the study of carotid artery in the neck.

2001

The aim of this work was to develop and employ software for the study of the common carotid artery and its branches in the neck. We first constructed geometric models of anatomic components, for the building of knowledge bases to be used in automatic feature extraction techniques from images. Then, we developed a software system characterised by three-dimensional visualisation, image processing functions, knowledge base and a programming language to describe classification processing by means of fuzzy logic. The software system was used to perform automatic reconstruction of three-dimensional models of carotid arteries from contiguous CT scans of the neck. These findings suggest that such s…

Models AnatomicImaging Three-DimensionalCarotid Artery CommonSoftware DesignHumansNeckMedicine carotid artery
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Multicolor 3D Printing of Complex Intracranial Tumors in Neurosurgery.

2020

Three-dimensional (3D) printing technologies offer the possibility of visualizing patient-specific pathologies in a physical model of correct dimensions. The model can be used for planning and simulating critical steps of a surgical approach. Therefore, it is important that anatomical structures such as blood vessels inside a tumor can be printed to be colored not only on their surface, but throughout their whole volume. During simulation this allows for the removal of certain parts (e.g., with a high-speed drill) and revealing internally located structures of a different color. Thus, diagnostic information from various imaging modalities (e.g., CT, MRI) can be combined in a single compact …

Models AnatomicSurgical approachGeneral Immunology and Microbiologybusiness.industryComputer sciencePetrous ApexBrain NeoplasmsGeneral Chemical EngineeringGeneral NeuroscienceAnatomical structures3D printingColorImaging dataGeneral Biochemistry Genetics and Molecular BiologyNeurosurgical ProceduresImaging Three-DimensionalColoredPrinting Three-DimensionalHumansSegmentationComputer visionArtificial intelligencebusinessVolume (compression)Journal of visualized experiments : JoVE
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Novel 3D bio-macromolecular bilinear descriptors for protein science: Predicting protein structural classes

2015

In the present study, we introduce novel 3D protein descriptors based on the bilinear algebraic form in the ℝn space on the coulombic matrix. For the calculation of these descriptors, macromolecular vectors belonging to ℝn space, whose components represent certain amino acid side-chain properties, were used as weighting schemes. Generalization approaches for the calculation of inter-amino acidic residue spatial distances based on Minkowski metrics are proposed. The simple- and double-stochastic schemes were defined as approaches to normalize the coulombic matrix. The local-fragment indices for both amino acid-types and amino acid-groups are presented in order to permit characterizing fragme…

Models MolecularProtein structural classesMathematical parametersProtein functionQuantitative Structure-Activity RelationshipBilinear interpolationQuantitative structure activity relation3D protein descriptorBilinear formProceduresChemical structureStatistical parametersMinkowski spaceProtein analysisAmino AcidsPriority journalMathematicsInterpretabilityQuantitative Biology::BiomoleculesApplied MathematicsStatistical parameterValidation studyGeneral MedicineComputer simulationDiscriminant analysisReproducibilityAmino acidAlgorithmChemistryProtein conformationModeling and SimulationStatistical modelGeneral Agricultural and Biological SciencesBiological systemAmino acid analysisAlgorithmsNonbiological modelStatistics and ProbabilityCorrelation coefficientLDAMacromolecular SubstancesMarkov chainMacromoleculeStructure analysisModels BiologicalArticleGeneral Biochemistry Genetics and Molecular BiologyCombinatoricsStochastic processesBilinear formBiologyMatrixGeneral Immunology and MicrobiologyProteinCoulombic matrixComputational BiologyProteinsReproducibility of ResultsLinear discriminant analysisWeightingCorrelation coefficientProtein structureBiological modelLinear ModelsThree-dimensional modelingJournal of Theoretical Biology
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Direct measurement of left ventricular outflow tract by transthoracic real-time 3D-echocardiography increases accuracy in assessment of aortic valve …

2007

Evaluation of aortic valve stenosis is a major clinical application of echocardiography. The widely employed continuity equation requires determination of the left ventricular outflow tract (LVOT) area. We aimed at testing whether direct area measurement in a volume data set is superior to conventional calculation from the LVOT diameter.We performed LVOT measurement in 20 normal subjects and 83 patients with moderate to severe aortic stenosis with a transthoracic real-time three-dimensional echocardiography (3D-TTE) technique in two systolic frames. The off-line 3D-evaluation allows full choice of section planes within the acquired volume data set. The aortic valve area was calculated from …

Moderate to severeAortic valveAdultMalemedicine.medical_specialtyEchocardiography Three-DimensionalReal time 3d echocardiographyVentricular Outflow ObstructionYoung AdultInternal medicinemedicineVentricular outflow tractHumansSystoleAgedAged 80 and overbusiness.industryAortic Valve StenosisMiddle Agedmedicine.diseaseStenosismedicine.anatomical_structureAortic valve areaEchocardiographyAortic valve stenosisCardiologyFemaleCardiology and Cardiovascular MedicinebusinessInternational journal of cardiology
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Calculation of bone graft volume using 3D reconstruction system.

2010

Objectives: To obtain bone ?bioreplicas? for determining precisely the amount of biomaterial required for bone regeneration procedure. Study design: A case-control comparison with a total sample size of 20 cases, 10 control and 10 test samples. ?Bioreplicas? were generated from helical CAT scans with 0.5 mm slices, without 3D reconstruction or image filters. Bone defects in premolar and molar areas were treated with titanium mesh and xenograft (MP3) combined with resorbable carriers. Time taken to carry out procedures with and without the use of ?bioreplicas? (in minutes), discrepancies between the grafts performed with and without ?bioreplicas? and bone defects (mm), and postoperative comp…

MolarModels AnatomicMaterials scienceDentistryImaging Three-DimensionalPremolarmedicineHumansRadiation treatment planningBone regenerationGeneral DentistryBone Transplantationbusiness.industry3D reconstructionBiomaterialBone defect:CIENCIAS MÉDICAS [UNESCO]medicine.anatomical_structureOtorhinolaryngologySurgery Computer-AssistedCase-Control StudiesUNESCO::CIENCIAS MÉDICASSurgeryGraft volumebusinessBiomedical engineeringMedicina oral, patologia oral y cirugia bucal
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