Search results for "throughput"
showing 10 items of 483 documents
On Equivalent Random Traffic method extension
2011
The key result of the paper is the Equivalent Random Traffic (ERT) method extension for estimation of the throughput for schemes with traffic splitting. The excellent accuracy (relative error is less than 1%) is shown in numerical example. A numerical algorithm is given — how to estimate the throughput for schemes at traffic splitting and merging. The paper also contains new Erlang-B formula algorithm for non-integer number of channels based on parabolic approximation.
Multicell power allocation method based on game theory for inter-cell interference coordination
2009
As a new technology, coordinated multipoint (CoMP) transmission is included in LTE-Advanced study item. Moreover, the network architecture in LTE-Advanced system is modified to take into account coordinated transmission. Under this background, a novel power allocation game model is established to mitigate inter-cell interference with cellular coordination. In the light of cellular cooperation relationship and centralized control in eNodeB, the power allocation in each served antenna unit aims to make signal to interference plus noise ratio (SINR) balanced among inter-cells. Through the proposed power allocation game algorithm, the users' SINR can reach the Nash equilibrium, making it feasib…
Distributed Resource Allocation in Underlay Multicast D2D Communications
2021
Multicast device-to-device communications operating underlay with cellular networks is a spectral efficient technique for disseminating data to nearby receivers. However, due to the critical challenge of having an intelligent interference coordination between multicast groups along with the cellular network, it is necessary to judiciously perform resource allocation for the combined network. In this work, we present a framework for a joint channel and power allocation strategy to maximize the sum rate of the combined network while guaranteeing minimum rate to individual groups and cellular users. The objective function is augmented by an austerity function that penalizes excessive assignmen…
Reliable Multicast D2D Communication Over Multiple Channels in Underlay Cellular Networks
2020
Multicast device-to-device (D2D) communications operating underlay with cellular networks is a spectral efficient technique for disseminating data to the nearby receivers. However, due to critical challenges such as, mitigating mutual interference and unavailability of perfect channel state information (CSI), the resource allocation to multicast groups needs significant attention. In this work, we present a framework for joint channel assignment and power allocation strategy to maximize the sum rate of the combined network. The proposed framework allows access of multiple channels to the multicast groups, thus improving the achievable rate of the individual groups. Furthermore, fairness in …
All-Food-Seq (AFS): a quantifiable screen for species in biological samples by deep DNA sequencing.
2013
Background DNA-based methods like PCR efficiently identify and quantify the taxon composition of complex biological materials, but are limited to detecting species targeted by the choice of the primer assay. We show here how untargeted deep sequencing of foodstuff total genomic DNA, followed by bioinformatic analysis of sequence reads, facilitates highly accurate identification of species from all kingdoms of life, at the same time enabling quantitative measurement of the main ingredients and detection of unanticipated food components. Results Sequence data simulation and real-case Illumina sequencing of DNA from reference sausages composed of mammalian (pig, cow, horse, sheep) and avian (c…
Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp Mb1 isolated from a production-scale biogas plant
2013
Methanobacterium sp. Mb1, a hydrogenotrophic methanogenic Archaeon, was isolated from a rural biogas plant producing methane-rich biogas from maize silage and cattle manure in Germany. Here we report the complete genome sequence of the novel methanogenic isolate Methanobacterium sp. Mb1 harboring a 2,029,766 bp circular chromosome featuring a GC content of 39.74%. The genome encodes two rRNA operons, 41 tRNA genes and 2021 coding sequences and represents the smallest genome currently known within the genus Methanobacterium. (C) 2013 Elsevier B.V. All rights reserved.
HECTOR : a parallel multistage homopolymer spectrum based error corrector for 454 sequencing data
2014
Background Current-generation sequencing technologies are able to produce low-cost, high-throughput reads. However, the produced reads are imperfect and may contain various sequencing errors. Although many error correction methods have been developed in recent years, none explicitly targets homopolymer-length errors in the 454 sequencing reads. Results We present HECTOR, a parallel multistage homopolymer spectrum based error corrector for 454 sequencing data. In this algorithm, for the first time we have investigated a novel homopolymer spectrum based approach to handle homopolymer insertions or deletions, which are the dominant sequencing errors in 454 pyrosequencing reads. We have evaluat…
FICC-Seq: a method for enzyme-specified profiling of methyl-5-uridine in cellular RNA.
2019
AbstractMethyl-5-uridine (m5U) is one the most abundant non-canonical bases present in cellular RNA, and in yeast is found at position U54 of tRNAs where modification is catalysed by the methyltransferase Trm2. Although the mammalian enzymes that catalyse m5U formation are yet to be identified via experimental evidence, based on sequence homology to Trm2, two candidates currently exist, TRMT2A and TRMT2B. Here we developed a genome-wide single-nucleotide resolution mapping method, Fluorouracil-Induced-Catalytic-Crosslinking-Sequencing (FICC-Seq), in order to identify the relevant enzymatic targets. We demonstrate that TRMT2A is responsible for the majority of m5U present in human RNA, and t…
The power and limitations of genomic surveillance of bacteria.
2019
Is there a widespread clone of Serratia marcescens producing outbreaks worldwide?
2021
[Background]: Serratia marcescens frequently causes outbreaks in healthcare settings. There are few studies using high-throughput sequencing (HTS) that analyse S. marcescens outbreaks. We present the analysis of two outbreaks in neonatal intensive care units (NICUs) in hospitals from the Comunitat Valenciana (CV, Spain) and the impact of using different reference genomes.