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Marked Neurospora crassa strains for competition experiments and Bayesian methods for fitness estimates
2019
AbstractThe filamentous fungusNeurospora crassa, a model microbial eukaryote, has a life cycle with many features that make it suitable for studying experimental evolution. However, it has lacked a general tool for estimating relative fitness of different strains in competition experiments. To remedy this need, we constructedN. crassastrains that contain a modifiedcsr-1locus and developed an assay for detecting the proportion of the marked strain using a post PCR high resolution melting assay. DNA extraction from spore samples can be performed on 96-well plates, followed by a PCR step, which allows many samples to be processed with ease. Furthermore, we suggest a Bayesian approach for estim…
Prevalence of infection as a predictor of multiple genotype infection frequency in parasites with multiple-host life cycle.
2012
In nature, parasites commonly share hosts with other conspecific parasite genotypes. While adult parasites typically show aggregated distribution in their final hosts, aggregation of clonal parasite genotypes in intermediate hosts, such as those of trematodes in molluscs, is not generally known. However, infection of a host by multiple parasite genotypes has significant implications for evolution of virulence and host-parasite coevolution. Aggregated distribution of the clonal stages can increase host mortality and reduce larval output of each infecting genotype through interclonal competition, and therefore have significant implications for parasite epidemiology. The aim of this study was …
Interspecies interactions mediated by conductive minerals in the sediments of the iron rich meromictic Lake La Cruz, Spain
2019
espanolLa laguna de La Cruz puede considerarse como un analogo biogeoquimico de los ambientes marinos en la Tierra primitiva, porque su columna de agua, muy escasa en sulfato pero rica en metano y hierro, presenta condiciones similares a estos ambientes en el Precambrico. En este ambiente encontramos que particulas conductivas establecen un acoplamiento metabolico entre clados microbianos electroactivos. Demostraremos que el sedimento anoxico de la laguna de La Cruz, rico en minerales de hierro biogeoquimicamente “reactivos”, alberga conocidas especies electroactivas tales como Geobacter y Methanothrix, ademas de otros grupos microbianos que no han sido previamente asociados con un estilo d…
Antibiotics accelerate growth at the expense of immunity
2021
Antibiotics have long been used in the raising of animals for agricultural, industrial or laboratory use. The use of subtherapeutic doses in diets of terrestrial and aquatic animals to promote growth is common and highly debated. Despite their vast application in animal husbandry, knowledge about the mechanisms behind growth promotion is minimal, particularly at the molecular level. Evidence from evolutionary research shows that immunocompetence is resource-limited, and hence expected to trade off with other resource-demanding processes, such as growth. Here, we ask if accelerated growth caused by antibiotics can be explained by genome-wide trade-offs between growth and costly immunocompete…
The asexual enchytraeid worm Cognettia sphagnetorum (Oligochaeta) has increased Cu resistance in polluted soil
2001
We studied Cu resistance in the asexual (reproduction through fragmentation) enchytraeid worms (Cognettia sphagnetorum, Oligochaeta) originating from two sites: one uncontaminated, and another contaminated by heavy metals. Adult worms were smaller and population density was lower at the polluted site. However, adults from the contaminated site had better survival in Cu-contaminated soil, but lower survival as juveniles (fragments). As we do not know the genetic basis of Cu resistance of the worms, it may have been reached by acclimatization via induced Cu regulation. Because fragmentation is the only mode of reproduction, all phenotypic properties (including resistance) of a parental genera…
Identification and characterization of five polymorphic microsatellite loci in the freshwater copepod Hemidiaptomus gurneyi (Copepoda: Calanoida: Dia…
2016
Hemidiaptomus diaptomid copepods are known to be excellent biological indicators for the highly biodiverse crustacean communities inhabiting Mediterranean temporary ponds (MTPs), an endangered inland water habitat whose conservation is considered a priority according to the “Habitat Directive” of the European Union. This study reports on the characterization of five polymorphic microsatellite loci in Hemidiaptomus gurneyi, to be used as markers for fine-scale studies on the population genetic structure and metapopulation dynamics of a typical and obligate MTP dweller. The five selected loci proved to be polymorphic in the species, with three to five polymorphic loci per studied population. …
Litter quality, land-use history, and nitrogen deposition effects on topsoil conditions across European temperate deciduous forests
2019
Topsoil conditions in temperate forests are influenced by several soil-forming factors, such as canopy composition (e.g. through litter quality), land-use history, atmospheric deposition, and the parent material. Many studies have evaluated the effects of single factors on physicochemical topsoil conditions, but few have assessed the simultaneous effects of multiple drivers. Here, we evaluate the combined effects of litter quality, land-use history (past land cover as well as past forest management), and atmospheric deposition on several physicochemical topsoil conditions of European temperate deciduous forest soils: bulk density, proportion of exchangeable base cations, carbon/nitrogen-rat…
Trophic interactions between introduced lake trout (Salvelinus namaycush) and native Arctic charr (S. alpinus) in a large Fennoscandian subarctic lake
2014
Introduced fishes may have major impacts on community structure and ecosystem function due to competitive and predatory interactions with native species. For example, introduced lake trout (Salvelinus namaycush) has been shown to replace native salmonids and induce major trophic cascades in some North American lakes, but few studies have investigated trophic interactions between lake trout and closely related native Arctic charr (S.alpinus) outside the natural distribution of the former species. We used stomach content and stable isotope analyses to investigate trophic interactions between introduced lake trout and native Arctic charr in large subarctic Lake Inarijarvi in northern Finland. …
Effect of ambient temperature variations on an indigenous microalgae-nitrifying bacteria culture dominated by Chlorella
2019
[EN] Two outdoor photobioreactors were operated to evaluate the effect of variable ambient temperature on an indigenous microalgae-nitrifying bacteria culture dominated by Chlorella. Four experiments were carried out in different seasons, maintaining the temperature-controlled PBR at around 25¿°C (by either heating or cooling), while the temperature in the non-temperature-controlled PBR was allowed to vary with the ambient conditions. Temperatures in the range of 15¿30¿°C had no significant effect on the microalgae cultivation performance. However, when the temperature rose to 30¿35¿°C microalgae viability was significantly reduced. Sudden temperature rises triggered AOB growth in the indig…
Exploiting chemical ecology to manage hyperparasitoids in biological control of arthropod pests
2020
Abstract Insect hyperparasitoids are fourth trophic level organisms that commonly occur in terrestrial food webs, yet they are relatively understudied. These top‐carnivores can disrupt biological pest control by suppressing the populations of their parasitoid hosts, leading to pest outbreaks, especially in confined environments such as greenhouses where augmentative biological control is used. There is no effective eco‐friendly strategy that can be used to control hyperparasitoids. Recent advances in the chemical ecology of hyperparasitoid foraging behavior have opened opportunities for manipulating these top‐carnivores in such a way that biological pest control becomes more efficient. We p…