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showing 10 items of 14693 documents

Systematic revision of the Late Miocene sabre-toothed felid Paramachaerodus in Spain

2010

Abstract:  A systematic revision of the sabre-toothed cat genus Paramachaerodus Pilgrim, 1913 is presented. Two species are recognized within Paramachaerodus, Pa. orientalis, and Pa. maximiliani, and the genus Promegantereon Kretzoi, 1938 is retrieved to include Promegantereon ogygia. Material from the Turolian Spanish localities of Crevillente-2 (MN 11, Alicante) and Las Casiones (MN 13, Teruel), which was previously assigned to Paramachaerodus, is now included in the tribe Metailurini. The exceptional discoveries at the Spanish Vallesian (MN 10, Madrid) fossil site of Batallones-1 have made it possible to characterize the dentition and cranial anatomy of a previously very poorly known mac…

0106 biological sciences010506 paleontologyeducation.field_of_studyDentitionbiologyPopulationPaleontologyLate Miocenebiology.organism_classification010603 evolutionary biology01 natural sciences6. Clean waterProtoconePaleontologyMachairodontinaeGenusVallesianMetailurinieducationEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesPalaeontology
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Heteroptera of Lebanon. II.Phytocoris(Exophytocoris)RaunolinnavuoriiSp. Nov. from the Horsh Ehden Nature Reserve and Adjacent Areas (Hemiptera: Heter…

2016

Abstract A new species of Phytocoris (Heteroptera: Miridae: Mirinae: Mirini), P. (Exophytocoris) raunolinnavuorii sp. nov., is described and illustrated from Lebanon. The new species, easily distinguished from all the other species of the subgenus by its coloration and male genitalia, belongs to the Phytocoris pinihalepensis-group. The new species lives on the conifers Abies cilicica (Antoine & Kotschy) Carriere (Pinaceae) and Juniperus excelsa M. Bieb. (Cupressaceae).

0106 biological sciences010506 paleontologyfood.ingredientPhytocorisbiologyHeteroptera010607 zoologybiology.organism_classification01 natural sciencesHemipteraMiridaefoodPinaceaeInsect ScienceBotanySubgenusJuniperus excelsa0105 earth and related environmental sciencesAbies cilicicaEntomologica Americana
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Comment on “A simple way to incorporate uncertainty and risk into forest harvest scheduling”

2017

In a recent research article, Robinson et al. (2016) described a method of estimating uncertainty of harvesting outcomes by analyzing the historical yield to the associated prediction for a large number of harvest operations. We agree with this analysis, and consider it a useful tool to integrate estimates of uncertainty into the optimization process. The authors attempt to manage the risk using two different methods, based on deterministic integer linear programming. The first method focused on maximizing the 10th quantile of the distribution of predicted volume subject to area constraint, while the second method focused on minimizing the variation of total quantity of volume harvested sub…

0106 biological sciences021103 operations researchOperations researchComputer science0211 other engineering and technologiesDownside riskScheduling (production processes)Forestry02 engineering and technologyManagement Monitoring Policy and Lawepävarmuus01 natural sciencesStochastic programmingExpected shortfallstochastic programmingConditional Value at Riskta1181Research articleuncertaintyInteger programming010606 plant biology & botanyNature and Landscape ConservationQuantileriskForest Ecology and Management
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Stabilizing selection on microsatellite allele length at arginine vasopressin 1a receptor and oxytocin receptor loci

2017

The loci arginine vasopressin receptor 1a ( avpr1a ) and oxytocin receptor ( oxtr ) have evolutionarily conserved roles in vertebrate social and sexual behaviour. Allelic variation at a microsatellite locus in the 5′ regulatory region of these genes is associated with fitness in the bank vole Myodes glareolus . Given the low frequency of long and short alleles at these microsatellite loci in wild bank voles, we used breeding trials to determine whether selection acts against long and short alleles. Female bank voles with intermediate length avpr1a alleles had the highest probability of breeding, while male voles whose avpr1a alleles were very different in length had reduced probability of …

0106 biological sciences0301 basic medicine1001MaleReceptors Vasopressin197VNTRLocus (genetics)gene dynamicsBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesGene FrequencyGenotypeGenetic variationAnimalsBehaviourAlleleStabilizing selectionSelection GeneticAllele frequencyAllelesGeneral Environmental ScienceGeneticsnoncoding genomeGeneral Immunology and MicrobiologylisääntymiskäyttäytyminenArvicolinae70Genetic Variation14General MedicineOxytocin receptor030104 developmental biologyReceptors OxytocinMicrosatelliteta1181Femalereproductive behaviourGeneral Agricultural and Biological SciencesResearch ArticleMicrosatellite Repeats
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Carex sect. Rhynchocystis (Cyperaceae): a Miocene subtropical relict in the Western Palaearctic showing a dispersal‐derived Rand Flora pattern

2017

Aim To evaluate how Cenozoic climate changes shaped the evolution and distribution of Carex section Rhynchocystis. Location Western Palaearctic and Afrotropical regions (Rand Flora pattern). Methods DNA regions ITS, ETS (nuclear), matK and rpl32-trnLUAG (plastid) were amplified for 86 samples of species from section Rhynchocystis. Phylogenetic and phylogeographical relationships were inferred using maximum parsimony, Bayesian inference and coalescent-based species tree approaches. Divergence times and ancestral areas were also inferred. Results Carex section Rhynchocystis is a clade that diversified during the middle Miocene in Europe. Most cladogenesis events date to the middle and late Mi…

0106 biological sciences0301 basic medicineCarexEcologyPleistocenebiologyEcologyWestern Palaearctic15. Life on landLate Miocenebiology.organism_classification010603 evolutionary biology01 natural sciencesCoalescent theory03 medical and health sciencesPaleontology030104 developmental biologyCladogenesisAridificationCenozoicEcology Evolution Behavior and SystematicsJournal of Biogeography
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In vivo photoprotection mechanisms observed from leaf spectral absorbance changes showing VIS–NIR slow-induced conformational pigment bed changes

2019

Abstract Regulated heat dissipation under excessive light comprises a complexity of mechanisms, whereby the supramolecular light-harvesting pigment–protein complex (LHC) shifts state from light harvesting towards heat dissipation, quenching the excess of photo-induced excitation energy in a non-photochemical way. Based on whole-leaf spectroscopy measuring upward and downward spectral radiance fluxes, we studied spectrally contiguous (hyperspectral) transient time series of absorbance A(λ,t) and passively induced chlorophyll fluorescence F(λ,t) dynamics of intact leaves in the visible and near-infrared wavelengths (VIS–NIR, 400–800 nm) after sudden strong natural-like illumination exposure. …

0106 biological sciences0301 basic medicineChlorophyllMaterials sciencePassive chlorophyll a fluorescencePigment–protein dynamicsLightHyperspectral remote sensingAnalytical chemistryJuglansPlant Science01 natural sciencesBiochemistryEnergy quenchingFluorescenceAbsorbance03 medical and health sciencesTransmittanceFiber Optic TechnologySpectroscopyChlorophyll fluorescencechemistry.chemical_classificationSpectroscopy Near-InfraredAbsorbed photosynthetic active radiation (APAR)Non-photochemical quenching (NPQ)Cell BiologyGeneral MedicineEquipment DesignPigments BiologicalPhotochemical ProcessesCarotenoidsPlant LeavesWavelength030104 developmental biologychemistryXanthophyllRadianceOriginal ArticleAbsorbance shiftMorusControlled heat dissipation010606 plant biology & botanyPhotosynthesis Research
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The problem of misidentification between edible and poisonous wild plants: Reports from the Mediterranean area

2018

Abstract Today, in many European countries, people are looking for wild edible plants to experience new tastes and flavors, by following the new trend of being green and environmentally friendly. Young borage and spinach leaves can be easily confused by inexpert pickers with those of other plants, including poisonous ones, such as Mandragora autumnalis Bertol. (mandrake) or Digitalis purpurea L. (foxglove), common in southern and northern Italy respectively. In the last twenty years, several cases of intoxication by accidental ingestion of mandrake and foxglove have been reported. The purpose of this work was to perform a pharmacognostic characterization of young leaves from borage, mandrak…

0106 biological sciences0301 basic medicineChromatography GasDigitalis GlycosidePhytochemicalsIntoxicationBiologyPhytochemicalToxicology010603 evolutionary biology01 natural sciencesEdible plantGas Chromatography-Mass SpectrometryAccidental ingestion03 medical and health sciencesPlant leaveAlkaloidsAlkaloidHumansDiscriminant analysePoisonous plants Edible plants Plant leaves Accidental ingestion Intoxication Discriminant analysesBorageTraditional medicineMediterranean RegionSettore BIO/02 - Botanica SistematicaDigitalis purpureafood and beveragesMandragora autumnalisDigitalis GlycosidesDiscriminant analysesGeneral MedicineMandrakebiology.organism_classificationPoisonous plantPlant LeavesPlants Toxic030104 developmental biologyPhytochemicalItalyChromatography GaPoisonous plantsSettore BIO/03 - Botanica Ambientale E ApplicataAccidental ingestionEdible plantsEdible plantsMediterranean areaPlants EdibleFood ScienceHuman
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Comparative Mitogenomics of Leeches (Annelida: Clitellata): Genome Conservation and Placobdella-Specific trnD Gene Duplication.

2015

Mitochondrial DNA sequences, often in combination with nuclear markers and morphological data, are frequently used to unravel the phylogenetic relationships, population dynamics and biogeographic histories of a plethora of organisms. The information provided by examining complete mitochondrial genomes also enables investigation of other evolutionary events such as gene rearrangements, gene duplication and gene loss. Despite efforts to generate information to represent most of the currently recognized groups, some taxa are underrepresented in mitochondrial genomic databases. One such group is leeches (Annelida: Hirudinea: Clitellata). Herein, we expand our knowledge concerning leech mitochon…

0106 biological sciences0301 basic medicineClitellatalcsh:MedicineBiochemistry01 natural sciencesGenomeDatabase and Informatics MethodsRNA TransferGene DuplicationGene OrderInvertebrate GenomicsGene duplicationAnnelidslcsh:SciencePhylogenyEnergy-Producing OrganellesData ManagementGeneticseducation.field_of_studyMultidisciplinaryPhylogenetic treePhylogenetic AnalysisGenomicsGenomic DatabasesMitochondriaNucleic acidsPhylogeneticsGenes MitochondrialPlacobdella parasiticaCellular Structures and OrganellesTransfer RNAResearch ArticleComputer and Information SciencesMitochondrial DNAPopulationBioenergeticsBiologyResearch and Analysis Methods010603 evolutionary biologyEvolution MolecularOpen Reading Frames03 medical and health sciencesPhylogeneticsLeechesGeneticsAnimalsEvolutionary Systematics14. Life underwaterCodonMolecular Biology TechniquesNon-coding RNAeducationMolecular BiologyTaxonomyMolecular Biology Assays and Analysis TechniquesEvolutionary Biologylcsh:ROrganismsBiology and Life SciencesComputational BiologyCell BiologyGenome Analysisbiology.organism_classificationInvertebratesBiological Databases030104 developmental biologyAnimal GenomicsGenome MitochondrialRNAlcsh:QPLoS ONE
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Spatio-temporal dynamics of genetic variation in the Iberian lynx along its path to extinction reconstructed with ancient DNA

2017

here is the tendency to assume that endangered species have been both genetically and demographically healthier in the past, so that any genetic erosion observed today was caused by their recent decline. The Iberian lynx (Lynx pardinus) suffered a dramatic and continuous decline during the 20th century, and now shows extremely low genome- and species-wide genetic diversity among other signs of genomic erosion. We analyze ancient (N = 10), historical (N = 245), and contemporary (N = 172) samples with microsatellite and mitogenome data to reconstruct the species' demography and investigate patterns of genetic variation across space and time. Iberian lynx populations transitioned from low but …

0106 biological sciences0301 basic medicineConservation of Natural ResourcesMetapopulationBiologyLincesExtinction Biological010603 evolutionary biology01 natural sciencesEndangered speciesgenetic erosion03 medical and health sciencesGenetic driftGenetic variationGeneticsAnimalsDNA AncientGenetic erosionancient DNAMolecular BiologyQH426Institut für Biochemie und BiologieDiscoveriesEcology Evolution Behavior and SystematicsPaleobiologíaGenetic diversityQLGenomeExtinctionAncient DNAEcologyQHEndangered SpeciesGenetic DriftGenetic VariationPaleogeneticsParque nacional de DoñanaSequence Analysis DNAIberian lynxGenéticahumanities030104 developmental biologyAncient DNAGenome MitochondrialLynxPaleogeneticsGenetic erosionpaleogeneticsMicrosatellite Repeats
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’Structural constraints in cyanobacteria-mediated whole-cell biotransformation of methoxylated and methylated derivatives of 2′-hydroxychalcone

2019

Halophilic and freshwater strains of cyanobacteria representing the Oscillatoriales, Nostocales, Chroococcales, and Synechococcales orders of Cyanophyta were examined to determine (i) the resistance of their cultures when suppressed by the presence of exogenous methoxylated and methylated derivatives of 2'-hydroxychalcone, (ii) morphological changes in cells treated with the tested chalcones and, most importantly, (iii) whether these photoautotrophic microorganisms transform chalcone derivatives in a structure- or strain-dependent manner. The growth of cyanobacterial cultures depended on chalcone derivatives and the strain; nevertheless, trends for correlations between these parameters are …

0106 biological sciences0301 basic medicineCyanobacteriaChalconeStereochemistrySubstituentBioengineeringCyanobacteriaHydroxylation01 natural sciencesApplied Microbiology and BiotechnologyMethylationHydroxylation03 medical and health scienceschemistry.chemical_compoundChalconesBiotransformation010608 biotechnologyBiotransformationNostocalesSynechococcalesHydrogenative bioreductionbiologyEthoxylationGeneral Medicinebiology.organism_classification030104 developmental biologychemistryOscillatorialesWhole-cell biotransformationBiotechnologyJournal of Biotechnology
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