Search results for "tomography"
showing 10 items of 2332 documents
Calf muscle activation strategies in healthy and injured achilles tendon conditions
2015
Artikkeliväitöskirja. Sisältää yhteenveto-osan ja neljä artikkelia. Article dissertation. Contains an introduction part and four articles.
Microstructural evaluation and recommendations for face masks in community use to reduce the transmission of respiratory infectious diseases
2022
Funding Information: A.K., H.Y. and R.J. also acknowledges the funding through Academy of Finland BESIMAL (Decision No. 334197) and Aalto University, Department of Communications and Networking. This work has also received funding in part from the EPSRC UK (grant number EP/R012091/1). A.K. would also like to thank Mr. Volkan Kaplan for the fruitful discussions in the early concept generation. Publisher Copyright: © 2022 The Author(s) Background and Objective: Recommendations for the use of face masks to prevent and protect against the aerosols (≤5µm) and respiratory droplet particles (≥5µm), which can carry and transmit respiratory infections including severe acute respiratory syndrome coro…
Soft X-ray Tomography Reveals HSV-1-Induced Remodeling of Human B Cells.
2022
Upon infection, viruses hijack the cell machinery and remodel host cell structures to utilize them for viral proliferation. Since viruses are about a thousand times smaller than their host cells, imaging virus-host interactions at high spatial resolution is like looking for a needle in a haystack. Scouting gross cellular changes with fluorescent microscopy is only possible for well-established viruses, where fluorescent tagging is developed. Soft X-ray tomography (SXT) offers 3D imaging of entire cells without the need for chemical fixation or labeling. Here, we use full-rotation SXT to visualize entire human B cells infected by the herpes simplex virus 1 (HSV-1). We have mapped the temporo…
Quantitative microscopy reveals stepwise alteration of chromatin structure during herpesvirus infection
2019
During lytic herpes simplex virus 1 (HSV-1) infection, the expansion of the viral replication compartments leads to an enrichment of the host chromatin in the peripheral nucleoplasm. We have shown previously that HSV-1 infection induces the formation of channels through the compacted peripheral chromatin. Here, we used three-dimensional confocal and expansion microscopy, soft X-ray tomography, electron microscopy, and random walk simulations to analyze the kinetics of host chromatin redistribution and capsid localization relative to their egress site at the nuclear envelope. Our data demonstrated a gradual increase in chromatin marginalization, and the kinetics of chromatin smoothening arou…
X-ray tomographic method for measuring three-dimensional deformation and water content distribution in swelling clays
2015
A non-invasive method for simultaneous measurement of the 3D displacement field and the water content distribution of a wetted solid material is developed. The method is based on comparison of X-ray tomographic images of a material sample in the reference state and in the wetted and deformed state. The deformation and water content analyses were successfully compared with numerical results for a cylindrical rubber test sample under axial compression, and with gravimetric results from axially wetted and sliced cylindrical bentonite samples, respectively. The methods were applied in a 4D study (three spatial dimensions and time) of wetting and deformation of purified swelling bentonite doped …
Characterization of three-dimensional microstructure of composite materials by X-ray tomography
2016
Analysis methods for X-ray microtomographic images of short fibre composite materials were developed. The methods enable estimation of microstructural properties of the material, e.g., aspect ratio and orientation of fibres. Being based on X-ray microtomography and image analysis, the methods are nondestructive and do not require user intervention. In particular, a method for determination of the aspect ratio of fibres was first developed. The method contains an assumption about similarity of the shape of the fibres. The assumption was relaxed in an improved method that can estimate cross-sectional properties of fibres, too, e.g., cross-sectional area. Additionally, the effect of finite ima…
Composition and corrosion phases of Etruscan Bronzes from Villanovan Age
2008
A neutron diffraction (ND) and neutron tomography (NT) study of laminated ancient bronzes was performed at the ISIS (Rutherford Appleton Laboratory, UK) neutron source and at the BENSC reactor (Hahn-Meitner Institut, Germany). The samples are part of an 8th century BC Etruscan collection discovered in the necropolises of Osteria-Poggio Mengarelli and Cavalupo in the Vulci area (Viterbo, Italy). The study allowed us to derive-in a totally non-destructive manner-information related to the main composition of the objects, possible presence of alterations and their nature, crusts and inclusions, as well as structure of the bulk. The presence of some components is linked to a variety of question…
Pore and mineral structure of rock using nano-tomographic imaging
2015
ABSTRACTIn order to better understand the micrometer-scale structure of rock and its transport properties which arise from it, seven monomineral samples from two sites (Olkiluoto and Sievi, Finland) were studied with micro- and nanotomography and scanning electron microscopy. From the veined gneiss of Olkiluoto we studied biotite, potassium feldspar, plagioclase (composition of oligoclase) and cordierite, and from Sievi tonalite biotite and two grains of plagioclase (albite). These minerals were the main minerals of these samples. Samples were carefully separated and selected using heavy liquid separation and stereomicroscopy, their three dimensional structure was imaged using X-ray tomogra…
3D virtual Histopathology of Cardiac Tissue from Covid-19 Patients based on Phase-Contrast X-ray Tomography
2021
X-ray phase-contrast tomography datasets of formalin fixed paraffin embedded unstained cardiac tissue from Covid-19 patients as well as from control tissue. For each group one overview scan of the entire biopsy (3.5mm cross section) from binning and stitching different tomograms (PB bin2, voxel size: 1.3µm) as well as the respective laboratory data (LJ, voxel size: 2µm, tissue masked) and a cone-beam zoom tomogram recorded with waveguide illumination (WG, voxel size: 159 nm) is uploaded. Further datasets can be provided on request. The data has been recorded at the institute for X-ray physics (Göttingen, Germany) and DESY at the GINIX instrument, beamline P10 of the PETRAII…
X-ray tomographic method for measuring 3D deformation and liquid content in swelling materials
2015
A non-invasive method for measuring the three-dimensional displacement field and liquid content distribution in a wetting and swelling material using X-ray tomographic imaging is introduced. The method is demonstrated here in monitoring the evolution of 3D deformation and water content distributions in cylindrical samples of swelling clay material wetted in a constant total volume. The measurements were carried out using a high-resolution microtomographic device (SkyScan 1172) and image voxel size 24 µm. The results obtained are repeatable and appear qualitatively correct and plausible. They are useful e.g. in validating models involving transport of water and the resulting deformation of s…