Search results for "var"

showing 10 items of 14701 documents

Allometric space and allometric disparity: a developmental perspective in the macroevolutionary analysis of morphological disparity.

2008

8 pages; International audience; Here, we advance novel uses of allometric spaces--multidimensional spaces specifically defined by allometric coefficients--with the goal of investigating the focal role of development in shaping the evolution of morphological disparity. From their examination, operational measures of allometric disparity can be derived, complementing standard signals of morphological disparity through an intuitive and process-oriented refinement of established analytical protocols used in disparity studies. Allometric spaces thereby become a promising context to reveal different patterns of evolutionary developmental changes and to assess their relative prevalence and import…

0106 biological sciences010506 paleontologyContext (language use)BiologyMacroevolutionSpace (mathematics)010603 evolutionary biology01 natural sciencesModels Biological[ SDV.BDD.MOR ] Life Sciences [q-bio]/Development Biology/MorphogenesisTaxonomic compositionSpecies SpecificityGeneticsMorphogenesisAnimalsdevelopmentEcology Evolution Behavior and Systematics0105 earth and related environmental sciences[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/PaleontologyAnalysis of VarianceAllometrymacroevolutionammonitesmorphometricsEcologyFossils[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]Perspective (graphical)Contrast (statistics)[SDV.BDD.MOR]Life Sciences [q-bio]/Development Biology/MorphogenesisBiological Evolutionmorphospace[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]PhenotypeCephalopodaEvolutionary biologyAllometryGeneral Agricultural and Biological Sciences[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology
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New fossil arthropods (Notostraca and Insecta: Syntonopterida) in the Continental Middle Permian of Provence (Bas-Argens Basin, France).

2009

9 pages; Apart frequent and relatively common ichnites, only a few body fossils (Ostracoda) have been mentioned in the Red Continental Permian formations of Provence till these last years. During 2006 and 2007 field researches, new arthropods have been discovered in the Pradineaux Formation of the Bas-Argens. They are Triopsidae (Crustacea, Notostraca) and an insect wing (Syntonopteridae) corresponding to a new genus and species Gallolithoneura butchlii gen. et sp. n. This latter is the first insect record in the Permian of Provence and the youngest one of this enigmatic Carboniferous paleopteran family. As in the other French Permian basins (Lodève, Saint-Affrique), these discoveries demon…

0106 biological sciences010506 paleontologyInsectaMiddle PermianPaleozoicPermianArthropodaBiostratigraphySyntonopterida010603 evolutionary biology01 natural sciencesPaleontologyNotostracaGenusCarboniferousPaleoclimatology0105 earth and related environmental sciences[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/PaleontologybiologyEcologyGeneral EngineeringMandibulataNotostracabiology.organism_classificationVarFrance[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyGeology
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Categorical versus geometric morphometric approaches to characterizing the evolution of morphological disparity in Osteostraci (Vertebrata, stem Gnat…

2020

Morphological variation (disparity) tends to be evaluated through two non-mutually exclusive approaches: (i) quantitatively, through geometric morphometrics, and (ii) in terms of discrete, ‘cladistic’, or categorical characters. Uncertainty over the comparability of these approaches diminishes the potential to obtain nomothetic insights into the evolution of morphological disparity, and the few benchmarking studies conducted so far show contrasting results. Here, we apply both approaches to characterising morphology in the stem-gnathostome vertebrate clade Osteostraci, in order to assess congruence between these alternative methods as well as to explore the evolutionary patterns of the grou…

0106 biological sciences010506 paleontologyMSci Palaeontology and Evolution/dk/atira/pure/core/keywords/msci_palaeontology_and_evolutionPaleontologia010603 evolutionary biology01 natural sciencesPaleontologyF600 GeologyCladegeometric morphometricsCategorical variableEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesMorphometricsC181 BiodiversityC300 ZoologybiologyPhylogenetic treeC182 EvolutionPaleontologyGnathostomataF641 PalaeontologyC191 Biometrybiology.organism_classificationOsteostraciOsteostracimorphospaceOrder (biology)disparityEvolutionary biologycategorical dataNomotheticPalaeontology
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Using latent variable models to identify large networks of species‐to‐species associations at different spatial scales

2015

Summary We present a hierarchical latent variable model that partitions variation in species occurrences and co-occurrences simultaneously at multiple spatial scales. We illustrate how the parameterized model can be used to predict the occurrences of a species by using as predictors not only the environmental covariates, but also the occurrences of all other species, at all spatial scales. We leverage recent progress in Bayesian latent variable models to implement a computationally effective algorithm that enables one to consider large communities and extensive sampling schemes. We exemplify the framework with a community of 98 fungal species sampled in c. 22 500 dead wood units in 230 plot…

0106 biological sciences010604 marine biology & hydrobiologyEcological ModelingBayesian probabilityCo-occurrenceLatent variable15. Life on land010603 evolutionary biology01 natural sciencesHierarchical database modelStatisticsCovariateEconometricsLeverage (statistics)Latent variable modelEcology Evolution Behavior and SystematicsPartial correlationMathematicsMethods in Ecology and Evolution
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Comment on “A simple way to incorporate uncertainty and risk into forest harvest scheduling”

2017

In a recent research article, Robinson et al. (2016) described a method of estimating uncertainty of harvesting outcomes by analyzing the historical yield to the associated prediction for a large number of harvest operations. We agree with this analysis, and consider it a useful tool to integrate estimates of uncertainty into the optimization process. The authors attempt to manage the risk using two different methods, based on deterministic integer linear programming. The first method focused on maximizing the 10th quantile of the distribution of predicted volume subject to area constraint, while the second method focused on minimizing the variation of total quantity of volume harvested sub…

0106 biological sciences021103 operations researchOperations researchComputer science0211 other engineering and technologiesDownside riskScheduling (production processes)Forestry02 engineering and technologyManagement Monitoring Policy and Lawepävarmuus01 natural sciencesStochastic programmingExpected shortfallstochastic programmingConditional Value at Riskta1181Research articleuncertaintyInteger programming010606 plant biology & botanyNature and Landscape ConservationQuantileriskForest Ecology and Management
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Stabilizing selection on microsatellite allele length at arginine vasopressin 1a receptor and oxytocin receptor loci

2017

The loci arginine vasopressin receptor 1a ( avpr1a ) and oxytocin receptor ( oxtr ) have evolutionarily conserved roles in vertebrate social and sexual behaviour. Allelic variation at a microsatellite locus in the 5′ regulatory region of these genes is associated with fitness in the bank vole Myodes glareolus . Given the low frequency of long and short alleles at these microsatellite loci in wild bank voles, we used breeding trials to determine whether selection acts against long and short alleles. Female bank voles with intermediate length avpr1a alleles had the highest probability of breeding, while male voles whose avpr1a alleles were very different in length had reduced probability of …

0106 biological sciences0301 basic medicine1001MaleReceptors Vasopressin197VNTRLocus (genetics)gene dynamicsBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesGene FrequencyGenotypeGenetic variationAnimalsBehaviourAlleleStabilizing selectionSelection GeneticAllele frequencyAllelesGeneral Environmental ScienceGeneticsnoncoding genomeGeneral Immunology and MicrobiologylisääntymiskäyttäytyminenArvicolinae70Genetic Variation14General MedicineOxytocin receptor030104 developmental biologyReceptors OxytocinMicrosatelliteta1181Femalereproductive behaviourGeneral Agricultural and Biological SciencesResearch ArticleMicrosatellite Repeats
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Ant recognition cue diversity is higher in the presence of slavemaker ants

2015

Social insect colonies defend themselves from intruders through nestmate recognition, yet the evolution and maintenance of recognition cue diversity is still poorly understood. We compared the recognition cue diversity of 9 populations of Temnothorax longispinosus ant colonies, including populations that harbored the socially parasitic slavemaker ant, Protomognathus americanus. Although ants recognize friends from foe based on recognition cues encoded in their cuticular hydrocarbon profile, which specific compounds are involved in recognition is unknown for most species. We therefore started by statistically identifying 9 putative recognition compounds involved in worker and colony aggressi…

0106 biological sciences0301 basic medicineAbiotic componentBrood parasiteEcologyHost (biology)media_common.quotation_subjectInsectAnt colonyBiology010603 evolutionary biology01 natural sciencesANT03 medical and health sciences030104 developmental biologyEvolutionary biologyGenetic variationAnimal Science and ZoologyEcology Evolution Behavior and SystematicsDiversity (politics)media_commonBehavioral Ecology
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Cuticular hydrocarbon profiles differ between ant body parts: implications for communication and our understanding of CHC diffusion.

2020

Abstract Insect cuticular hydrocarbons (CHCs) serve as communication signals and protect against desiccation. They form complex blends of up to 150 different compounds. Due to differences in molecular packing, CHC classes differ in melting point. Communication is especially important in social insects like ants, which use CHCs to communicate within the colony and to recognize nestmates. Nestmate recognition models often assume a homogenous colony odor, where CHCs are collected, mixed, and redistributed in the postpharyngeal gland (PPG). Via diffusion, recognition cues should evenly spread over the body surface. Hence, CHC composition should be similar across body parts and in the PPG. To te…

0106 biological sciences0301 basic medicineAcademicSubjects/SCI01320Melting temperaturemedia_common.quotation_subjectZoologyInsecteusocial insectsBiology010603 evolutionary biology01 natural sciencesmelting temperature03 medical and health sciencesBody surfacecuticle regionalizationFormicidaemedia_commonSpecial Column: Uncovering Variation in Social Insect CommunicationAcademicSubjects/SCI01130EusocialityANT030104 developmental biologyGuest Editors: Alessandro CINI Luca Pietro CASACCI Volker NEHRINGOdorSex pheromoneAnimal Science and ZoologyWhole bodypheromonesnestmate recognitionCurrent zoology
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Olive Growing in a Time of Change: From Empiricism to Genomics

2016

Since its beginning, the olive crop has been a long-lived agricultural system in the Mediterranean Basin being well adapted to this area. Traditional olive growing, still prevalent in most producing areas, is characterized by low tree density and rainfed orchards with low yield and manually harvested. The traditional olive growing technology is local, diverse, and empirically based. New high density, irrigated, and mechanically harvested orchards has been progressively planted since the end of World War II. These plantations produce high crops at low costs, but they reduce the diversity of cultivars, increase the demand of inputs and the risk of environment unbalances. The expansion and int…

0106 biological sciences0301 basic medicineAgroforestrymedia_common.quotation_subjectBiology01 natural sciencesNatural resourceMediterranean BasinScarcityCrop03 medical and health sciencesAgricultural science030104 developmental biologyYield (wine)SustainabilityCultivarGenetic erosion010606 plant biology & botanymedia_common
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Gametic and somatic embryogenesis through in vitro anther culture of different Citrus genotypes

2015

Abstract: In vitro tissue culture represents a useful technique for advancing Citrus breeding and propagation. Among in vitro regeneration systems, anther culture is commonly used to produce haploids and doubled haploids for a fast-track producing homozygous lines, in comparison with the traditional self-pollination approach, which involves several generations of selfing. In addition, anthers culture can produce somatic embryos that can also be used for clonal propagation. In this study, two thermal shocks were applied to the anthers of six Citrus genotypes (two clementine and four sweet oranges), just after they were put in culture. The response obtained was different depending on the geno…

0106 biological sciences0301 basic medicineAnther cultureSomatic embryogenesiscytofluorometryEvolutionStamenPlant ScienceBiology01 natural sciences03 medical and health sciencesTissue cultureBehavior and Systematicsmicrospore embryogenesiBotanyCultivarEcology Evolution Behavior and SystematicsEcologyfungiAnther culture; cytofluorometry; homozygosity; microspore embryogenesis; ploidy level; Ecology Evolution Behavior and Systematics; Plant Sciencefood and beveragesSelfingEmbryoploidy levelEcology Evolution Behavior and SystematicSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboree030104 developmental biologymicrospore embryogenesisPloidyhomozygosityClementine010606 plant biology & botany
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