Search results for "vih"

showing 10 items of 255 documents

Epigenetic and Genetic Contributions to Adaptation in Chlamydomonas

2017

Epigenetic modifications, such as DNA methylation or histone modifications, can be transmitted between cellular or organismal generations. However, there are no experiments measuring their role in adaptation, so here we use experimental evolution to investigate how epigenetic variation can contribute to adaptation. We manipulated DNA methylation and histone acetylation in the unicellular green alga Chlamydomonas reinhardtii both genetically and chemically to change the amount of epigenetic variation generated or transmitted in adapting populations in three different environments (salt stress, phosphate starvation, and high CO2) for two hundred asexual generations. We find that reducing the …

0106 biological sciences0301 basic medicinehiilidioksidiEpigenomicsAdaptation Biological01 natural sciencestolerance (physical)Epigenesis GeneticEpigenomicssietokyky2. Zero hungerGeneticsExperimental evolutionepigeneettinen periytyminenSalt Tolerancegreen algaeAdaptation PhysiologicalHistoneDNA methylationepigenetic inheritancephosphate starvationBiologyEnvironment010603 evolutionary biologysuolapitoisuus03 medical and health sciencesviherlevätGenetic variationGeneticsEpigeneticssalt contentexperimental evolutionravinnepitoisuusMolecular BiologyGeneEcology Evolution Behavior and Systematicssalt tolerancefosfaatitta1183ChlamydomonasGenetic Variationadaptive walkcarbon dioxideDNA Methylation030104 developmental biologyepigenetic mutationMutationbiology.proteinta1181methylationAdaptationDirected Molecular EvolutionChlamydomonas reinhardtii
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Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors

2019

Reactive oxygen species (ROS)-dependent signaling pathways from chloroplasts and mitochondria merge at the nuclear protein RADICAL-INDUCED CELL DEATH1 (RCD1). RCD1 interacts in vivo and suppresses the activity of the transcription factors ANAC013 and ANAC017, which mediate a ROS-related retrograde signal originating from mitochondrial complex III. Inactivation of RCD1 leads to increased expression of mitochondrial dysfunction stimulon (MDS) genes regulated by ANAC013 and ANAC017. Accumulating MDS gene products, including alternative oxidases (AOXs), affect redox status of the chloroplasts, leading to changes in chloroplast ROS processing and increased protection of photosynthetic apparatus.…

0106 biological sciences0301 basic medicineretrograde signalingChloroplastsArabidopsisPlant BiologyMitochondrion01 natural sciencesElectron Transport Complex IIIGene Expression Regulation PlantArabidopsisOXIDATIVE STRESS-RESPONSETranscriptional regulationCYCLIC ELECTRON FLOWBiology (General)Nuclear proteinANAC transcription factors1183 Plant biology microbiology virologyreactive oxygen speciesbiologyChemistryRETROGRADE REGULATIONGeneral NeuroscienceQRNuclear Proteinsfood and beveragesGeneral MedicinePlants Genetically Modified:Science::Biological sciences [DRNTU]Cell biologyMitochondriaChloroplastviherhiukkasetMedicineSignal transductionmitochondrial functionsResearch ArticleSignal TransductionQH301-705.5SciencemitokondriotGenetics and Molecular BiologyGeneral Biochemistry Genetics and Molecular BiologyPROTEIN COMPLEXESSIGNALING PATHWAYS03 medical and health scienceschloroplastStress PhysiologicalALTERNATIVE OXIDASESkasvitENZYME-ACTIVITIESredox signalingTranscription factorarabidopsis RCD1General Immunology and MicrobiologybiokemiaArabidopsis Proteinsta1182Biology and Life Sciencesbiology.organism_classification030104 developmental biologyCELL-DEATHPLANT-MITOCHONDRIAA. thalianaGeneral BiochemistryRetrograde signalingGENES-ENCODING MITOCHONDRIALproteiinit010606 plant biology & botanyTranscription Factors
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Grasslands provide diverse opportunities for bird species along an urban-rural gradient

2021

Urbanisation is a major cause of biodiversity loss but careful habitat management and provision of green space within cities can help to mitigate its negative effects. Grasslands occupy large surface areas and have many functions but only a few studies have begun to explore how birds exploit these habitats in urban contexts. We hypothesized that the value of grasslands for nesting and feeding birds is likely to depend both on landscape context, and on local characteristics (grassland size, use and vegetation structure). We surveyed local habitat characteristics, breeding bird presence, abundance and foraging activity in 47 grassland sites, distributed along an urban-rural gradient in two Fr…

0106 biological sciencesForagingBiodiversityurban parks010603 evolutionary biology01 natural sciencesGrasslandAbundance (ecology)joutomaaelinympäristöviheralueetComputingMilieux_MISCELLANEOUS2. Zero hungergeographygeography.geographical_feature_categoryEcologyground-foragingEcology010604 marine biology & hydrobiologyagricultural grasslandwastelandVegetation15. Life on landresidential gardensluonnon monimuotoisuusbiodiversiteettiUrban StudiesUrban ecologyHabitat[SDE]Environmental SciencesnurmikotlinnutSpecies richnessFrancekaupungistuminen[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Co-Designing Urban Carbon Sink Parks: Case Carbon Lane in Helsinki

2021

In order to achieve the goals of carbon (C) neutrality within next 20 year, municipalities worldwide need to increasingly apply negative emission technologies. We focus on the main principles of urban demonstration areas using biochars for C sequestration and explore the lessons learned from a co-creation process of one such park, Hyväntoivonpuisto in Helsinki, Finland. Demonstration sites of urban C sinks in public parks must be safe, visible and scientifically sound for reliable and cost-effective verification of carbon sequestration. We find that different interests can be arbitrated and that synergy that emerges from co-creation of urban C sink parks between stakeholders (scientists, ci…

0106 biological sciencesPublic parkProcess (engineering)urban parksCarbon sequestrationSEQUESTRATION7. Clean energy010603 evolutionary biology01 natural sciences12. Responsible consumption4111 AgronomyBIOMASSpuistottaajamametsätOrder (exchange)11. SustainabilityGE1-350biocharEnvironmental planningsoilsyhteissuunnitteluGeneral Environmental ScienceBIOCHARCarbon sinkkaupunkisuunnitteluhiilensidonta04 agricultural and veterinary sciencestreescarbon sequestrationEnvironmental scienceshiilinielut13. Climate actiondemonstration sites040103 agronomy & agriculture0401 agriculture forestry and fisheriesNeutralityBusinessviherympäristö
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Variational Approximations for Generalized Linear Latent Variable Models

2017

Generalized linear latent variable models (GLLVMs) are a powerful class of models for understanding the relationships among multiple, correlated responses. Estimation, however, presents a major challenge, as the marginal likelihood does not possess a closed form for nonnormal responses. We propose a variational approximation (VA) method for estimating GLLVMs. For the common cases of binary, ordinal, and overdispersed count data, we derive fully closed-form approximations to the marginal log-likelihood function in each case. Compared to other methods such as the expectation-maximization algorithm, estimation using VA is fast and straightforward to implement. Predictions of the latent variabl…

0106 biological sciencesStatistics and ProbabilityMathematical optimizationBinary numberfactor analysisLatent variableordination010603 evolutionary biology01 natural sciences010104 statistics & probabilityItem response theoryDiscrete Mathematics and CombinatoricsApplied mathematicslatent trait0101 mathematicsLatent variable modelMathematicsta112item response theoryFunction (mathematics)Latent class modelMarginal likelihoodfaktorianalyysipappisvihkimysmultivariate analysisvariational approximationStatistics Probability and UncertaintyCount data
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Ecosystem carbon response of an Arctic peatland to simulated permafrost thaw

2019

Permafrost peatlands are biogeochemical hot spots in the Arctic as they store vast amounts of carbon. Permafrost thaw could release part of these long-term immobile carbon stocks as the greenhouse gases (GHGs) carbon dioxide (CO 2 ) and methane (CH 4 ) to the atmosphere, but how much, at which time-span and as which gaseous carbon species is still highly uncertain. Here we assess the effect of permafrost thaw on GHG dynamics under different moisture and vegetation scenarios in a permafrost peatland. A novel experimental approach using intact plant–soil systems (mesocosms) allowed us to simulate permafrost thaw under near-natural conditions. We monitored GHG flux dynamics via high-resolution…

0106 biological scienceshiilidioksidiPeat010504 meteorology & atmospheric sciencesPermafrostikiroutaPermafrostAtmospheric sciences01 natural sciencesMethaneCO2 EXCHANGEclimate warmingPALSA MIREchemistry.chemical_compoundDissolved organic carbonGeneral Environmental SciencekasvihuoneilmiöGlobal and Planetary ChangeCLIMATE-CHANGEEcologyArctic Regionsmethane oxidationhiilen kiertopermafrost-carbon-feedbackPlantsmesocosmCOORGANIC-MATTERkasvihuonekaasutCH4 FLUXESgreenhouse gasNORTHERN PEATLANDSCarbon dioxideCO2MethaneOxidation-ReductionBiogeochemical cycleTUNDRA SOILSClimate Changeta1172ta1171010603 evolutionary biologymetaaniCarbon CycleGreenhouse GasesMETHANE EMISSIONSEnvironmental Chemistry0105 earth and related environmental sciencesAtmosphere15. Life on landCarbon DioxideWATER-TABLEEXTRACTION METHODArcticchemistry13. Climate actionGreenhouse gasEnvironmental science
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EL PAPEL DE LA AUTOESTIMA EN LA PREVENCIÓN DEL VIH DE JÓVENES ESPAÑOLES

2017

Abstract.THE ROLE OF SELF-ESTEEM IN HIV PREVENTION AMONG SPANISH YOUNG PEOPLE SELF-ESTEEM INFLUENCES ON SEXUAL DEVELOPMENT AND RELATIONSHIPS OF YOUNG PEOPLE.Aims to examine the effects of the self-esteem on HIV prevention, 467 young people from the Valencian Community (Mage = 20.62; SD = 2.14) completed the Rosenberg Self-esteem Scale and the Aids Prevention Questionnaire by Ballester et al. (2007). Results showed statistically significant positive correlation between self-esteem and self-efficacy in condom use (p = .000), perceived competence (p = .041) or number of sexual partners (p = .001). On the other hand, statistically significant negative correlation were found between solidarity t…

03 medical and health scienceslcsh:Psychology0302 clinical medicineprevención vihjóveneslcsh:BF1-99005 social sciencesautoestima050109 social psychology0501 psychology and cognitive sciences030212 general & internal medicineintervenciones psicológicasInternational Journal of Developmental and Educational Psychology. Revista INFAD de Psicología.
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Phylogenetic analysis of an epidemic outbreak of acute hepatitis C in HIV-infected patients by ultra-deep pyrosequencing.

2017

Abstract Background The incidence of acute hepatitis C (AHC) among HIV-infected men who have sex with men (MSM) has increased significantly in the last 10 years. Several studies point to a social and sexual network of HIV-positive MSM that extends internationally. Objectives The aim of our study was to investigate the dynamics of HCV transmission in an outbreak of AHC in HIV-infected MSM in Barcelona by ultra-deep pyrosequencing. Study design Between 2008 and 2013, 113 cases of AHC in HIV-infected MSM were diagnosed in the Infectious Diseases Unit, Hospital Clinic, Barcelona. Massive sequencing was performed using the Roche 454 GS Junior platform. To define possible transmission networks, m…

0301 basic medicineAdultMalemedicine.medical_specialtySexual networkSexual BehaviorHIV InfectionsHepacivirusBiologyInfectionsBiotecnologiaMen who have sex with menDisease Outbreaks03 medical and health sciences0302 clinical medicineRisk FactorsVirologyGenotypemedicineHumansHomosexuality MaleEpidemicsPhylogenyPhylogenetic treeTransmission (medicine)CoinfectionIncidence (epidemiology)Public healthIncidenceOutbreakvirus diseasesGenetic VariationHigh-Throughput Nucleotide SequencingVirologyHepatitis CInfeccionsVirus030104 developmental biologyInfectious DiseasesSpainAcute Disease030211 gastroenterology & hepatologyInfeccions per VIHMalalties de transmissió sexualDemographyHIV infectionsJournal of clinical virology : the official publication of the Pan American Society for Clinical Virology
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Biofiltration of airborne VOCs with green wall systems : microbial and chemical dynamics

2018

Botanical air filtration is a promising technology for reducing indoor air contaminants, but the underlying mechanisms need better understanding. Here, we made a set of chamber fumigation experiments of up to 16 weeks of duration, to study the filtration efficiencies for seven volatile organic compounds (VOCs; decane, toluene, 2-ethylhexanol, α-pinene, octane, benzene, and xylene) and to monitor microbial dynamics in simulated green wall systems. Biofiltration functioned on sub-ppm VOC levels without concentration-dependence. Airflow through the growth medium was needed for efficient removal of chemically diverse VOCs, and the use of optimized commercial growth medium further improved the e…

0301 basic medicineEnvironmental EngineeringAirflowta1172viherseinätmicrobiomeindoor air bioremediation010501 environmental sciences01 natural scienceslaw.inventionbiologinen puhdistus03 medical and health scienceschemistry.chemical_compoundlawbotanical biofilterta219phytotechnologyFiltration0105 earth and related environmental sciencesRhizosphereXylenePublic Health Environmental and Occupational Healthhydroviljelyhigh-throughput sequencingBuilding and ConstructionContamination6. Clean water030104 developmental biologyilman epäpuhtaudetmikrobistochemistryPhytotechnologyEnvironmental chemistryBiofilterEnvironmental sciencehydrocultureGreen wallIndoor Air
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The F4/AS01B HIV-1 Vaccine Candidate Is Safe and Immunogenic, But Does Not Show Viral Efficacy in Antiretroviral Therapy-Naive, HIV-1-Infected Adults…

2016

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0301 basic medicinemyalgiaAdultCD4-Positive T-LymphocytesMalemedicine.medical_specialty4850AdolescentMedizinHIV InfectionsVacunesPlaceboAntibodies Virallaw.invention03 medical and health sciencesYoung Adult0302 clinical medicineRandomized controlled triallawInternal medicineVIH (Virus)medicineHumansSingle-Blind Method030212 general & internal medicineYoung adultAdverse effectAIDS VaccinesVaccinesHIV (Viruses)business.industryClinical Trial/Experimental StudyGeneral MedicineConfidence intervalCD4 Lymphocyte CountClinical trial030104 developmental biologyAnti-Retroviral AgentsImmunologyAntibody FormationComputingMethodologies_DOCUMENTANDTEXTPROCESSINGHIV-1Femalemedicine.symptombusinessViral loadResearch Article
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