Search results for "ylid"

showing 10 items of 1155 documents

Computational approach to design of aptamers to the receptor binding domain of SARS-CoV-2

2021

The aim of the research. In this work, in silico selection of DNA-aptamers to the receptor-binding domain (RBD) of the SARS-CoV-2 spike protein was performed using molecular modeling methods. Material and methods. A new computational approach to aptamer in silico selection is based on a cycle of simulations, including the stages of molecular modeling, molecular docking, molecular dynamic simulations, and quantum chemical calculations. To verify the obtained calculated results flow cytometry, fluorescence polarization, and small-angle X-ray scattering methods were applied. Results. An initial library consisted of 256 16-mer oligonucleotides was modeled. Based on molecular docking results, th…

Aptamer Receptor-binding domain SARS-CoV-2 Selectionkoronaviruksetreseptorit (biokemia)oligonukleotiditSARS-CoV-2kvanttikemiaSARS-CoV-2-virusaptamerselectionmolekyylidynamiikkareceptor-binding domainlaskennallinen kemia
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CCDC 817805: Experimental Crystal Structure Determination

2011

Related Article: M.Sarwar, A.M.Madalan, F.Lloret, M.Julve, M.Andruh|2011|Polyhedron|30|2414|doi:10.1016/j.poly.2011.06.011

Aqua-chloro-(22'-(propane-13-diylbis((nitrilo)methylylidene))-bis(6-methoxyphenolato))-iron(iii)Space GroupCrystallographyCrystal SystemCrystal StructureCell ParametersExperimental 3D Coordinates
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Synthesis and Redox Behaviour of the Chalcogenocarbonyl Dianions, [(E)C(PPh2S)2]2−: Formation and Structures of Chalcogen−Chalcogen Bonded Dimers and…

2010

The lithium salts of the chalcogenocarbonyl dianions [(E)C(PPh(2)S)(2)](2-) (E=S (4 b), Se (4 c)) were produced through the reactions between Li(2)[C(PPh(2)S)(2)] and elemental chalcogens in the presence of tetramethylethylenediamine (TMEDA). The solid-state structure of {[Li(TMEDA)](2)[(Se)C(PPh(2)S)(2)]}-[{Li(TMEDA)}(2)4 c]-was shown to be bicyclic with the Li(+) cations bis-S,Se-chelated by the dianionic ligand. One-electron oxidation of the dianions 4 b and 4 c with iodine afforded the diamagnetic complexes {[Li(TMEDA)](2)[(SPh(2)P)(2)CEEC(PPh(2)S)(2)]} ([Li(TMEDA)](2)7 b (E=S), [Li(TMEDA)](2)7 c (E=Se)), which are formally dimers of the radical anions [(E)C(PPh(2)S)(2)](-) (.) (E=S (5 …

Bicyclic moleculeLigandStereochemistryOrganic ChemistryProtonationGeneral ChemistryTetramethylethylenediamineCrystal structureCatalysisAdductchemistry.chemical_compoundCrystallographyChalcogenchemistrychalcogenocarbonyl dianionskalkogeenikarbonyylidianionitSelone
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Ceramide Mediates Acute Oxygen Sensing in Vascular Tissues

2014

AbstractAims: A variety of vessels, such as resistance pulmonary arteries (PA) and fetoplacental arteries and the ductus arteriosus (DA) are specialized in sensing and responding to changes in oxygen tension. Despite opposite stimuli, normoxic DA contraction and hypoxic fetoplacental and PA vasoconstriction share some mechanistic features. Activation of neutral sphingomyelinase (nSMase) and subsequent ceramide production has been involved in hypoxic pulmonary vasoconstriction (HPV). Herein we aimed to study the possible role of nSMase-derived ceramide as a common factor in the acute oxygen-sensing function of specialized vascular tissues. Results: The nSMase inhibitor GW4869 and an anticera…

CeramideContraction (grammar)PhysiologyClinical BiochemistryGene ExpressionChick EmbryoPulmonary ArterySphingomyelin phosphodiesteraseBiologyCeramidesBenzylidene CompoundsBiochemistrychemistry.chemical_compoundHypoxic pulmonary vasoconstrictionmedicineAnimalsHumansHypoxiaMolecular BiologyGeneral Environmental Sciencechemistry.chemical_classificationReactive oxygen speciesAniline CompoundsDuctus ArteriosusCell BiologyCell biologyOxygen tensionOxygenOriginal Research CommunicationsSphingomyelin PhosphodiesteraseShaw Potassium ChannelsBiochemistrychemistryVasoconstrictionBlood VesselsGeneral Earth and Planetary Sciencesmedicine.symptomReactive Oxygen SpeciesSphingomyelinVasoconstrictionAntioxidants & Redox Signaling
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1,3-Dipolar cycloaddition of diaryldiazomethanes across N-ethoxy-carbonyl-N-(2,2,2-trichloroethylidene)amine and reactivity of the resulting 2-azabut…

2016

Abstract 1,3-dipolar cycloaddition of diaryldiazomethanes Ar2C N2 across Cl3C–CH N–CO2Et 1 yields Δ3-1,2,4-triazolines 2. Thermolysis of 2 leads, via transient azomethine ylides 3, to diaryldichloroazabutadienes [Ar(Ar')C N–CH CCl2] 4. Treatment of 4a (Ar = Ar' = C6H5) and 4c (Ar = Ar' = p-ClC6H4) with NaSR in DMF yields 2-azabutadienes [Ar2C N–C(H) C(SR)2] 5. In contrast, nucleophilic attack of NaStBu on 4 affords azadienic dithioethers [Ar2C N–C(StBu) C(H)(StBu)] (7a Ar = C6H5; 7b Ar' = p-ClC6H4). The reaction of 4a with NaSEt conducted in neat EtSH produces [Ph2C N–C(H)(SEt)–CCl2H] 8, which after dehydrochloration by NaOMe and subsequent addition of NaSEt is converted to [Ph2C N–C(SEt) C…

Chemistry(all)StereochemistryGeneral Chemical Engineering124-TriazolineCrystal structure010402 general chemistry01 natural sciencesMedicinal chemistrychemistry.chemical_compoundThioetherNucleophile[CHIM]Chemical SciencesReactivity (chemistry)ThioetherCycloadditionComputingMilieux_MISCELLANEOUS2-Azabutadienes010405 organic chemistryGeneral ChemistryCycloaddition0104 chemical sciences3. Good healthchemistry13-Dipolar cycloadditionAzomethine ylidesChemical Engineering(all)Alkoxy groupPiperidineCopperMacrocyclic complexComptes Rendus Chimie
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Convective electrodiffusion processes through graft-modified charged porous membranes

1999

Convective diffusion and electrophoresis across a charged porous membrane showing variable permeability properties were studied. The membrane used was prepared by grafting poly(acrylic acid) (PAA) onto a porous polyvinylidene fluoride (PVDF) membrane. The degree of grafting was selected to be relatively low, 18 wt%, to compromise between the ion selectivity and hydraulic permeability of the membrane. The possible electric field induced effects on the membrane permselectivity were examined after the membrane had been characterized by convective diffusion and concentration cell potential measurements. The measured electrophoresis data, however, could be modelled using the extended Teorell–Mey…

ChemistryGeneral Chemical EngineeringAnalytical chemistryPolyvinylidene fluorideConcentration cellPolyelectrolyteAnalytical ChemistryElectrophoresischemistry.chemical_compoundMembraneChemical engineeringPermeability (electromagnetism)ElectrochemistrySemipermeable membraneIon transporterJournal of Electroanalytical Chemistry
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Influenza A virus infection inhibits the efficient recruitment of Th2 cells into the airways and the development of airway eosinophilia.

2003

Abstract Most infections with respiratory viruses induce Th1 responses characterized by the generation of Th1 and CD8+ T cells secreting IFN-γ, which in turn have been shown to inhibit the development of Th2 cells. Therefore, it could be expected that respiratory viral infections mediate protection against asthma. However, the opposite seems to be true, because viral infections are often associated with the exacerbation of asthma. For this reason, we investigated what effect an influenza A (flu) virus infection has on the development of asthma. We found that flu infection 1, 3, 6, or 9 wk before allergen airway challenge resulted in a strong suppression of allergen-induced airway eosinophil…

ChemokineEpitopes T-LymphocyteImmunoglobulin Emedicine.disease_causeMiceCell MovementInfluenza A virusImmunology and AllergyEosinophiliaChemokine CCL5LungCells CulturedChemokine CCL2Mice KnockoutMice Inbred BALB Cbiologymedicine.diagnostic_testrespiratory systemUp-Regulationmedicine.anatomical_structureInfluenza A virusChemokines CCGoblet CellsNippostrongylusmedicine.symptomBronchial HyperreactivityChemokine CCL11OvalbuminImmunologyDown-RegulationMice TransgenicCCL5VirusInterferon-gammaTh2 CellsOrthomyxoviridae InfectionsLymphopeniamedicineAnimalsLymphocyte CountPulmonary EosinophiliaStrongylida InfectionsGoblet cellMetaplasiaAllergensPeptide Fragmentsrespiratory tract diseasesMice Inbred C57BLBronchoalveolar lavageImmunologyCell Migration Inhibitionbiology.proteinInterleukin-5Journal of immunology (Baltimore, Md. : 1950)
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CCDC 249547: Experimental Crystal Structure Determination

2005

Related Article: M.Viciano, E.Mas-Marza, M.Poyatos, M.Sanau, R.H.Crabtree, E.Peris|2005|Angew.Chem.,Int.Ed.|44|444|doi:10.1002/anie.200461918

Chloro-(eta^4^-cyclo-15-octadiene)-hydrido-(bis(N-methyl-13-dihydridoimidazol-3-yl-2-ylidene)(ferrocenyl)methane)-iridium hexafluorophosphate monohydrateSpace GroupCrystallographyCrystal SystemCrystal StructureCell ParametersExperimental 3D Coordinates
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Controlling Exciton Propagation in Organic Crystals through Strong Coupling to Plasmonic Nanoparticle Arrays.

2022

Exciton transport in most organic materials is based on an incoherent hopping process between neighboring molecules. This process is very slow, setting a limit to the performance of organic optoelectronic devices. In this Article, we overcome the incoherent exciton transport by strongly coupling localized singlet excitations in a tetracene crystal to confined light modes in an array of plasmonic nanoparticles. We image the transport of the resulting exciton–polaritons in Fourier space at various distances from the excitation to directly probe their propagation length as a function of the exciton to photon fraction. Exciton–polaritons with an exciton fraction of 50% show a propagation length…

Condensed Matter::Quantum GasesCondensed Matter::OtherPhysics::Opticsmolecular dynamics simulationspolariton transportfysikaalinen kemiaCondensed Matter::Mesoscopic Systems and Quantum Hall EffectelektronitkvasihiukkasetplasmonicsAtomic and Molecular Physics and Opticsnanoparticle arraytetraceneElectronic Optical and Magnetic MaterialsCondensed Matter::Materials Sciencemolekyylifysiikkaplasmoniikkastrong light-matter couplingeksitonitnanohiukkasetmolekyylidynamiikkaElectrical and Electronic EngineeringBiotechnologyACS photonics
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Analytic first and second derivatives for the CCSDT-n (n = 1–3) models: a first step towards the efficient calculation of CCSDT properties

2000

Analytic first and second derivatives of the energy are implemented for closed-shell systems described by the CCSDT-n (n=1, 1b, 2 and 3) and CC3 electron correlation models. A detailed discussion of the computational requirements of these calculations is given, along with diagrammatic formulas for all relevant quantities. The method is applied to calculate the nuclear magnetic shielding of H2O, CO and N2O and the structure and properties of propadienylidene.

Diagrammatic reasoningElectronic correlationComputational chemistryChemistryTriatomic moleculeElectromagnetic shieldingStructure (category theory)General Physics and AstronomyApplied mathematicsPhysical and Theoretical ChemistryPropadienylideneDiatomic moleculeSecond derivativePhysical Chemistry Chemical Physics
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